ID AF172259; SV 1; linear; genomic RNA; STD; VRL; 6435 BP. XX AC AF172259; XX DT 02-AUG-2000 (Rel. 64, Created) DT 05-OCT-2000 (Rel. 65, Last updated, Version 2) XX DE Potato virus X complete genome. XX KW . XX OS Potato virus X OC Viruses; Riboviria; Tymovirales; Alphaflexiviridae; Potexvirus. XX RN [1] RP 1-6435 RX DOI; 10.1023/A:1008178800366. RX PUBMED; 10872879. RA Malcuit I., de Jong W., Baulcombe D.C., Shields D.C., Kavanagh T.A.; RT "Acquisition of multiple virulence/avirulence determinants by potato virus RT X (PVX) has occurred through convergent evolution rather than through RT recombination"; RL Virus Genes 20(2):165-172(2000). XX RN [2] RP 1-6435 RA de Jong W., Baulcombe D.C.; RT ; RL Submitted (24-JUL-1999) to the INSDC. RL Sainsbury Laboratory, John Innes Center, Colney Lane, Norwich NR4 7UH, U.K. XX DR MD5; 98b1839b407f6599727393f4e0412531. DR EuropePMC; PMC2727447; 19714238. DR EuropePMC; PMC5377869; 28466060. DR RFAM; RF00184; PVX_3. XX FH Key Location/Qualifiers FH FT source 1..6435 FT /organism="Potato virus X" FT /strain="CP4" FT /mol_type="genomic RNA" FT /db_xref="taxon:12183" FT CDS 85..4455 FT /codon_start=1 FT /product="replicase" FT /db_xref="GOA:Q9IMP2" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q9IMP2" FT /protein_id="AAF89747.1" FT /translation="MAKVREVYQSFTDSTTKTLIQDEAYRNIRPIMEKHKLSNPYAQTI FT EAANDLEGFGIATNPYSIELHTHAAAKTIENKLLEVLGSLLPQEPVTFMFLKPRKLNFM FT RRNPRIKDIFHNVAIEPRDVARYPKETIIHKLAEIETDTAYISDTLHFLDPSYIVETFQ FT NCPKLQTLYATLVLPVEAAFKMESTHPNIYSLKYFGDGFQYIPGNHGGGAYHHEFSHLQ FT WLKVGKIKWRDPKDGLLGHLNYTHEQVDTHTVTVQLQESFAANHLYCIRRGNMMTPEVR FT TFGQPDRYVLPPQIFLPKVHNCKKPILKKTMMQLFLYVRTVKVAKNCDIFAKVRQLIKS FT SDLDKFSAVELVYLVSYMEFLAALQATTCFSDTLSGGLLTKTLAPVRAWIQEKKMQLCG FT LEDYAKLVKAVDWRPVDFSFKVETWDFRFHPLGMWKAFRPSELSDVEEMNNFFDDGDLL FT DCFTRMPAYAVNAEEDLAGMRGNNQEETSTAPREPEGEKKEYINPAETFLDKLTRKHNR FT ETRSRAAKKAKRLAEIQDSMNRDRTEEGSHKTPNMGEAPSNAELPGVNEVGAGTTFPTL FT KALSQKWEDASFTDSSTIDPTEIIPGKEDVKAATQKVVDELPWKHWLPQLNAVGFKALE FT IQRDRNGTMIMPITEMVFGLDKEEFPEGTPETLARELKAMNRSPTTIPLDLLRARDYGS FT DVKNKRIGAITKTQAASWGEYLTGKIESLPERKVAACVIHGAGGSGKSHAIQKALREIG FT KGSDITVVLPTNELRLDWSKKVPNTEPYMFKTYEKALIGGTGSIVIFDDYSKLPPGYIE FT ALVSFSTKIKLIILTGDSRQSVYHETSDDASIRHLGPATEVFAKYCRYYLNATHRNKKD FT LANMLGVYSERTGTTEISMSSEFLEGVPTLVPSDEKRRLYMGTGRNDTFTYAGCQGLTK FT PKVQIVLDHNTQVCSANVMYTALSRATDRIHFINTSANSSAFWEKLDSTPYLKTFLSVV FT REHALKEYEPAEAEPIKEPEPQTHMCVENEESVLEEYKEELLEKFDREIHSDAHGHSNC FT VQTEDTTIQLFSHQQAKDETLLWATIDARLKTSNQESNFREFLSKRDIGDVLFLNYQRA FT MGLPKEPIPFSQEVWEACAHEVQSKYLSKSKCNLINGTVRQSPDFDENKIMVFLKSQWV FT TKVEKLGLPKIKPGQTIAAFYQQTVMLFGTMARYMRWFRQAFQPKEVFINCETTPEDMS FT AWALSNWNFTRPSLANDYTAFDQSQDGAMLQFEVLKAKHHCIPEEIIQAYIDIKTNAQI FT FLGTLSIMRLTGEGPTFDANTECNIAFTHTKFDIPAGTAQVYAGDDSALDCVPEVKQSF FT HRLEDKLLLKSKPVITQQKKGSWPEFCGWLITPKGVMKDPIKLHVSLKLAEAKGELRKC FT QDSYEIDLSYAYDHKDSLHDLFDEKQCQAHTLTCRTLIKSGRGTVSLPRLKNFL" FT CDS 4486..5166 FT /codon_start=1 FT /product="25 kDa protein" FT /db_xref="GOA:Q9IMP1" FT /db_xref="InterPro:IPR027351" FT /db_xref="UniProtKB/TrEMBL:Q9IMP1" FT /protein_id="AAF89748.1" FT /translation="MDILITSLKSLGYSRTARPLDSSPLVVHAVAGAGKSTALRKLLAR FT HSTFTVHTLGVPDKISIRTRGIQKPGPIPEGNFAILDEYTLDATTREAYQALFADPYQA FT PELSLEPHFYLETSFRTPRKAAALIASCGFDFETNSQEEGHLEVTGIFKGPLLGKVIAI FT DSEAETTLSRHGVEFVKPCQVTGLEFPVVTIVSAAPIGEIGQSTLFYNAITRSKGLTYV FT RAGA" FT CDS 5147..5494 FT /codon_start=1 FT /product="12 kDa protein" FT /db_xref="GOA:Q9IMP0" FT /db_xref="InterPro:IPR001896" FT /db_xref="UniProtKB/TrEMBL:Q9IMP0" FT /protein_id="AAF89749.1" FT /translation="MSAQGHRLTAPVNSEKVYIVLGLSFALISITFLLSRNNLPHVGDN FT IHSLPHGGAYRDGTKAVLYNSPNFGSRTSLSNGKNAAFAVVLLLSLLIYGSRCLSQRNH FT LCACGNNHSSH" FT CDS 5427..5639 FT /codon_start=1 FT /product="8 kDa protein" FT /db_xref="GOA:Q9IMN9" FT /db_xref="InterPro:IPR003411" FT /db_xref="UniProtKB/TrEMBL:Q9IMN9" FT /protein_id="AAF89750.1" FT /translation="MEAGAYLNAIIFVLVATIIAVISVGLTRTEPCTIRITGESITVHA FT CHIDSEMIKALANLKPLSLERLSFQ" FT CDS 5650..6360 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:Q9IMN8" FT /db_xref="InterPro:IPR000052" FT /db_xref="UniProtKB/TrEMBL:Q9IMN8" FT /protein_id="AAF89751.1" FT /translation="MTTPANTTQAVGSTTSTTTTTAGATPANSGLFTIPDGDFFSTAKA FT VVASNAVATNEDLAKIQEIWKDMKIPSDTMAQAAWDLVRHCADVGSSAQTEMIGTGPYS FT NGVSRARLAAAIKEVCTLRQFCKKYAPVVWNWMLTNNSPPANWQAQGFKPEHKFAAFDF FT FDGVTNPAAITPKEGLMRPPSEAEMNAAQTAAFVKITKARAQSNDFASLDAAVTRGRIT FT GTTVAEAVVSLPPP" XX SQ Sequence 6435 BP; 1916 A; 1645 C; 1519 G; 1355 T; 0 other; gaaaactaaa ccaaacacca ccaacacagc caaacccacc acgcccaatt aacacacacc 60 cgcttgaaaa agtaagtctg ttaaatggcc aaggtgcgcg aggtttacca atcattcacc 120 gattccacca caaaaacact tattcaggat gaggcgtacc gtaacatacg tcccatcatg 180 gaaaaacaca agttatccaa cccatacgct caaactatcg aagcagccaa cgatcttgaa 240 ggatttggca tagccacaaa cccttacagc atcgagttac atacacatgc ggccgctaag 300 acaattgaga ataaactttt ggaggtgctg ggctccctct tgccacaaga gcctgtcaca 360 ttcatgtttc tcaaacctag aaagctaaat ttcatgagga gaaacccccg gatcaaggac 420 attttccata atgtcgccat tgaaccgaga gatgttgcta gatacccaaa ggaaaccatc 480 atacacaaac tagcggagat agagacggac acggcataca tcagcgacac tctacacttc 540 ctcgacccga gctatattgt agagacgttc cagaactgtc cgaaactaca aacactctac 600 gccacactcg tcctcccagt ggaagctgct ttcaaaatgg aaagcaccca cccaaacata 660 tacagcctga agtactttgg tgacggcttc cagtacatac caggcaacca tggtggtgga 720 gcttatcacc atgaattcag ccacctgcag tggctaaaag ttggtaagat caagtggcgc 780 gacccaaagg acggtctact cggacatctt aactacacac atgagcaggt cgacacacac 840 acagtgaccg tacagctcca agagtccttc gctgcgaacc acttgtattg catcagaaga 900 ggaaatatga tgacaccaga ggtacgcacg tttggacaac cagacaggta tgtgctgcca 960 ccacaaatat tcctcccaaa ggtacacaac tgcaagaagc ccatcctgaa gaaaaccatg 1020 atgcagcttt ttctatacgt caggacagtc aaagtggcaa agaactgtga tatatttgcc 1080 aaggtaagac aactaattaa gtcctccgac ctggacaaat tctcggcggt tgagctagtc 1140 tacctagtca gttacatgga gtttctagcc gccctacagg ctaccacctg cttctccgac 1200 actttatcgg gcggcttact aacaaagact ctagcccctg taagagcttg gatccaagaa 1260 aagaagatgc aactttgtgg cttggaagac tacgcaaagc tggtcaaagc ggtggactgg 1320 cgcccagtgg acttctcttt taaagttgaa acctgggatt tcagattcca cccactaggc 1380 atgtggaagg ctttccggcc cagtgagctg tcagacgtgg aagagatgaa caacttcttt 1440 gacgatggcg acttgctgga ctgttttacg aggatgccag cttatgcagt caacgctgaa 1500 gaagacctgg ccgggatgag gggaaacaat caggaagaga catcaacagc ccctagagaa 1560 cccgagggag agaaaaagga atacatcaac ccggcagaaa ccttcctaga caaactgact 1620 aggaaacaca accgggaaac caggagtcgc gctgcaaaga aagccaaacg cctggccgaa 1680 atccaagact ccatgaacag ggacaggact gaggaaggaa gccataagac acccaacatg 1740 ggcgaagcgc caagcaacgc tgagcttccc ggcgtcaatg aagtgggggc tggcaccaca 1800 ttcccgacct tgaaagccct atcacaaaaa tgggaagatg catcatttac tgactcctca 1860 acaattgacc cgacggaaat catcccagga aaagaggacg tcaaggccgc aacacaaaaa 1920 gtggtggacg aactcccttg gaaacactgg ctcccccagc tgaatgcagt cggcttcaag 1980 gccctagaaa tccaaagaga cagaaatggg accatgatca tgcccatcac cgaaatggtt 2040 tttggacttg acaaagaaga gttccctgaa ggaacccctg aaacactagc tcgtgagctc 2100 aaagccatga atcgaagccc aaccacaatt cccttggact tactcagggc cagggactat 2160 gggagcgatg ttaaaaacaa gaggattggg gcaatcacta agactcaggc tgccagctgg 2220 ggtgagtacc taactggaaa aattgagagc ttaccagaga ggaaagtggc tgcttgtgtc 2280 atccatgggg ctgggggatc tggcaagagc cacgcgatcc aaaaagcgct gagagaaatt 2340 ggcaaggggt cagacattac tgtagtgctc ccaacaaatg agctgcggct ggactggagc 2400 aagaaggtcc caaacacaga gccctacatg ttcaagactt atgagaaagc cctgattggt 2460 ggaacaggaa gcatagtgat cttcgatgat tactctaagc taccaccagg ttatattgag 2520 gcactcgtca gcttctccac aaaaataaaa ttgatcattc ttactggaga tagcagacaa 2580 agtgtctacc atgagacgtc agatgacgct tctatcaggc acttaggccc ggctactgaa 2640 gtgtttgcta agtactgcag gtactacttg aacgccacac accgcaacaa gaaagacttg 2700 gcaaacatgc taggtgtgta cagcgagaga accggcacca ctgaaataag tatgagttct 2760 gaatttcttg aaggtgttcc gaccctagtg ccctcagacg aaaagaggag gttgtacatg 2820 ggcacaggca ggaatgacac attcacatac gcaggatgcc aaggtctcac gaagccaaaa 2880 gtccagattg tgctagacca caacactcaa gtgtgtagcg ccaatgttat gtacacagca 2940 ctatccaggg ccactgatag gattcacttc atcaacacta gtgccaactc atccgctttc 3000 tgggaaaagc ttgacagcac cccttacctg aagacctttc tatctgtcgt aagggagcat 3060 gcacttaagg agtatgagcc tgctgaagct gagcccatta aggagcccga accccagact 3120 cacatgtgcg tggagaatga ggagtctgta ctagaggagt acaaggaaga gttgctggaa 3180 aaatttgaca gggagatcca ctcagatgca cacggacact ccaactgcgt gcagactgaa 3240 gacaccacaa tacagctatt ctcccatcaa caggccaaag atgaaactct tctatgggca 3300 accattgatg ctcgcctgaa gaccagcaac caagaaagca acttccgtga gttcctgagt 3360 aagagagaca ttggagatgt actcttctta aattaccaga gggcaatggg gctgccaaag 3420 gaaccaatcc ctttctcaca ggaggtgtgg gaggcgtgcg cgcatgaggt gcagagtaag 3480 tatttgagca agtctaagtg caacctcatc aatggcacag ttaggcagag tcctgacttt 3540 gatgaaaaca aaatcatggt attccttaag tcccaatggg taactaaagt cgaaaagctg 3600 ggattgccaa agatcaaacc gggtcagact attgccgcct tttaccaaca gacagttatg 3660 ctctttggca caatggctcg atacatgcgt tggtttaggc aggcgtttca acccaaggaa 3720 gtcttcatca attgtgagac gacacctgag gacatgtcgg catgggcttt gagcaactgg 3780 aacttcacga ggcccagtct tgcaaatgac tacacggcct ttgatcagtc acaggacgga 3840 gccatgttgc agtttgaggt acttaaagcc aagcatcact gcatcccaga agagatcatc 3900 caggcataca ttgacatcaa gacaaacgca caaattttct taggcactct gtcaatcatg 3960 cgactcactg gagaaggccc aacatttgat gccaatactg agtgcaacat cgcctttaca 4020 cacaccaagt ttgacatacc cgcaggtaca gctcaagtgt acgctggcga tgactcggcg 4080 ctagactgtg ttccagaagt taagcaaagc ttccacaggc tggaagataa gttgttactc 4140 aagtccaagc cggtcatcac ccagcaaaag aaaggaagtt ggcccgaatt ctgtggatgg 4200 ttaatcacac cgaaaggagt catgaaagac cccatcaaat tgcacgtgag cttgaagctc 4260 gctgaagcta aaggggagct gaggaagtgt caggactcgt atgagataga cctgagttac 4320 gcctacgacc acaaggactc actgcatgat ttgtttgatg agaaacagtg ccaagcacat 4380 acactgacat gcaggacctt aataaagtcc ggacggggca ctgttagcct tccccgcctc 4440 aagaatttcc tataaccgtt aagttaccat ttagacttga ataagatgga tattctcatc 4500 actagtttga aaagtttagg ttactctaga actgctaggc ctttagattc cagtccctta 4560 gtagtacacg ctgttgccgg tgccggaaag tccactgcac tacggaagct gcttgcgcga 4620 cactcgacct tcacagtaca cactcttgga gtcccagata agatcagtat aaggaccagg 4680 ggcatacaga agccaggacc aattcccgaa ggcaattttg ccatcctgga cgagtacacg 4740 ctggacgcaa ccacaaggga ggcttaccaa gctctctttg cagatccgta tcaggcacca 4800 gaactcagtc tcgagcccca cttctacttg gaaacctcct tcaggacccc aaggaaagca 4860 gctgccttga tagctagctg cggctttgac tttgagacca attcgcaaga agagggacac 4920 ctcgaggtca cagggatatt caagggaccc ttgctaggaa aggtgattgc catagactca 4980 gaggctgaaa cgactttgtc taggcacgga gttgagtttg ttaagccgtg ccaagtcacg 5040 ggtctggaat tcccggtagt caccatcgtg tccgcagccc cgatcggaga aattggtcag 5100 tccactctgt tctacaacgc aatcacaagg tcgaaggggc tgacttatgt ccgcgcaggg 5160 gcatagactg accgcaccgg tcaactctga aaaagtgtac atagtattag gtttatcatt 5220 tgctttgatt tcaattactt tcctgctttc tagaaataac ttgcctcacg tcggggacaa 5280 tatccacagc ctaccacacg ggggagccta cagggacggc acaaaggcgg tcctatacaa 5340 ttcacccaac ttcggctcta gaactagcct gagcaacggc aagaacgcag ccttcgctgt 5400 tgtgcttttg ctgtcgctac taatatatgg aagcaggtgc ttatctcaac gcaatcatct 5460 ttgtgcttgt ggcaacaatc atagcagtca ttagcgtggg cttgactcgg acagagccat 5520 gcaccatcag aattaccggt gagtcgatca cggtacacgc ttgccacata gacagcgaga 5580 tgatcaaggc tctggctaac ctcaaaccac tctcacttga gcggttaagt ttccagtgat 5640 aattgaaaga tgactacacc agccaacacc actcaagctg taggatccac cacatcaact 5700 accaccacta ctgcaggcgc aactcctgcc aattcagggc tattcactat accagatggg 5760 gacttcttta gcaccgcgaa ggctgtggtc gctagcaatg ccgtggccac caacgaggat 5820 ctcgccaaaa tacaggagat ctggaaggac atgaaaattc cttcagacac tatggctcag 5880 gcagcttggg acttagtgag acactgtgcc gacgtcgggt cctctgccca aactgaaatg 5940 ataggcaccg gtccatactc caatggggtc agccgggcta gactggcagc tgccattaag 6000 gaggtgtgca cactgaggca gttctgcaaa aagtatgccc ccgtggtctg gaactggatg 6060 ctcacaaaca acagcccgcc ggccaactgg caggcacaag gcttcaagcc ggagcacaaa 6120 ttcgcagcct ttgacttctt tgatggagtc accaatcctg cagctatcac tccaaaagaa 6180 gggctcatga gacctccgtc tgaagcagaa atgaatgccg cccaaactgc tgcctttgtg 6240 aaaatcacca aggcgagggc gcaatccaac gactttgcca gtctggatgc cgcggtcact 6300 aggggccgca tcacaggaac gactgttgca gaagcagttg tttcactacc cccaccataa 6360 ctacgtccac ataaccgacg cgtatcccag tttcatagta ttttctggtt tgattgtatg 6420 aataatataa ataaa 6435 //