ID   AF171943; SV 1; linear; genomic RNA; STD; VRL; 1311 BP.
XX
AC   AF171943;
XX
DT   25-MAY-2000 (Rel. 63, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 2)
XX
DE   Pariacoto virus RNA2 capsid protein precursor alpha gene, complete cds.
XX
KW   .
XX
OS   Pariacoto virus
OC   Viruses; Riboviria; Nodaviridae; Alphanodavirus.
XX
RN   [1]
RP   1-1311
RX   DOI; 10.1128/JVI.74.11.5123-5132.2000.
RX   PUBMED; 10799587.
RA   Johnson K.N., Zeddam J.L., Ball L.A.;
RT   "Characterization and construction of functional cDNA clones of Pariacoto
RT   virus, the first Alphanodavirus isolated outside Australasia";
RL   J. Virol. 74(11):5123-5132(2000).
XX
RN   [2]
RP   1-1311
RA   Johnson K.N., Ball L.A.;
RT   ;
RL   Submitted (23-JUL-1999) to the INSDC.
RL   Microbiology, University of Alabama at Birmingham, 845 19th Street South,
RL   Birmingham, AL 35294, USA
XX
DR   MD5; a7883194671b64146463517b64f1940b.
DR   EuropePMC; PMC110865; 10799587.
DR   EuropePMC; PMC1262566; 16227260.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1311
FT                   /organism="Pariacoto virus"
FT                   /chromosome="RNA2"
FT                   /mol_type="genomic RNA"
FT                   /country="Peru"
FT                   /db_xref="taxon:103782"
FT   CDS             23..1228
FT                   /codon_start=1
FT                   /product="capsid protein precursor alpha"
FT                   /db_xref="GOA:Q9J7Z0"
FT                   /db_xref="InterPro:IPR000696"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="PDB:1F8V"
FT                   /db_xref="UniProtKB/Swiss-Prot:Q9J7Z0"
FT                   /protein_id="AAF71693.1"
FT                   /translation="MVSRTKNRRNKARKVVSRSTALVPMAPASQRTGPAPRKPRKRNQA
FT                   LVRNPRLTDAGLAFLKCAFAAPDFSVDPGKGIPDNFHGRTLAIKDCNTTSVVFTPNTDT
FT                   YIVVAPVPGFAYFRAEVAVGAQPTTFVGVPYPTYATNFGAGSQNGLPAVNNYSKFRYAS
FT                   MACGLYPTSNMMQFSGSVQVWRVDLNLSEAVNPAVTAITPAPGVFANFVDKRINGLRGI
FT                   RPLAPRDNYSGNFIDGAYTFAFDKSTDFEWCDFVRSLEFSESNVLGAATAMKLLAPGGG
FT                   TDTTLTGLGNVNTLVYKISTPTGAVNTAILRTWNCIELQPYTDSALFQFSGVSPPFDPL
FT                   ALECYHNLKMRFPVAVSSRENSKFWEGVLRVLNQISGTLSVIPGPVGTISAGVHQLTGM
FT                   YM"
FT   mat_peptide     23..1105
FT                   /product="mature capsid protein beta"
FT   mat_peptide     1106..1225
FT                   /product="mature capsid protein gamma"
XX
SQ   Sequence 1311 BP; 308 A; 351 C; 335 G; 317 T; 0 other;
     atgtacaggt ataacatcaa agatggtatc aagaactaag aatcgaagga acaaggcaag        60
     gaaggtcgtc agtcgcagta ccgctttagt gcccatggca ccagcgtcac agcgcactgg       120
     tccggccccg agaaagccgc gtaagcggaa ccaagcgctc gtgcgtaatc cacgtttgac       180
     agatgcaggt cttgcttttc tgaaatgtgc gtttgctgcc cctgatttta gtgtggatcc       240
     cggtaagggt attccggaca attttcatgg tcgcacactc gccattaagg attgcaacac       300
     cacgtcggtg gtgtttacac cgaacaccga cacgtacatc gtagtggccc ccgttccggg       360
     gttcgcgtat ttccgcgcag aggtcgcggt tggagcgcaa cccacaacgt tcgttggtgt       420
     gccctaccct acgtatgcca ctaacttcgg tgctggtagc caaaacgggc ttcctgctgt       480
     taacaactac agtaagttcc gttatgcgtc aatggcctgt gggctttacc ccacaagcaa       540
     tatgatgcag ttttcgggtt cagttcaagt gtggagagtt gacttgaacc tgagtgaggc       600
     tgtcaacccc gctgttactg cgattacccc tgcgccggga gtctttgcaa acttcgtcga       660
     taaacgtatc aatggcctga gaggcatccg ccccttggcg ccgcgagata actactctgg       720
     taactttatc gacggggctt acacctttgc ctttgataag tccaccgatt ttgagtggtg       780
     cgattttgtt cgctcgttgg agttctcaga atctaatgtt ctgggagcgg caacggcgat       840
     gaaactgcta gctcccggag gtggtactga tacaacgctc accggtttgg gtaacgtaaa       900
     cacattagtg tataagatat ccactccgac gggcgccgtg aacaccgcga ttctacggac       960
     ttggaattgc atcgagcttc agccttacac tgactcggcg ctcttccaat tctcaggggt      1020
     ctctccaccc ttcgaccctc tcgctcttga gtgttatcac aacctcaaga tgcggtttcc      1080
     agttgcagtc tcttcacggg agaacagcaa gttctgggaa ggtgtcctca gagtgctgaa      1140
     tcaaatttca ggcacactgt cagtgatacc aggtccagtc gggactatta gtgcaggcgt      1200
     tcatcaacta acaggaatgt acatgtaaag gacccccgcc gccagacccg ccgacaatcg      1260
     cacgtcgtaa aactgcgcgc tcgaaagctc ataaaagaaa caaccatggc c               1311
//