ID   AF166115; SV 1; linear; genomic DNA; STD; VRL; 1368 BP.
XX
AC   AF166115;
XX
DT   19-AUG-1999 (Rel. 60, Created)
DT   19-AUG-1999 (Rel. 60, Last updated, Version 1)
XX
DE   Potato virus Y helper component proteinase gene, partial cds.
XX
KW   .
XX
OS   Potato virus Y
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1368
RA   Llave C., Martinez B., Diaz-Ruiz J.R., Lopez-Abella D.;
RT   "Helper component mutations in nonconserved residues associated with lack
RT   of aphid transmissibility of a pepper Potato Virus Y isolate";
RL   Unpublished.
XX
RN   [2]
RP   1-1368
RA   Llave C., Martinez B., Diaz-Ruiz J.R., Lopez-Abella D.;
RT   ;
RL   Submitted (07-JUL-1999) to the INSDC.
RL   Biologia de Plantas, Centro de Investigaciones Biologicas, Velazquez 144,
RL   Madrid 28006, Spain
XX
DR   MD5; 5463ea1c871bfc9eafa6ee9851f2fefe.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1368
FT                   /organism="Potato virus Y"
FT                   /host="Capsicum annuum L."
FT                   /strain="PVY-1-2"
FT                   /mol_type="genomic DNA"
FT                   /note="non-aphid transmisible isolate"
FT                   /db_xref="taxon:12216"
FT   CDS             <1..>1368
FT                   /codon_start=1
FT                   /product="helper component proteinase"
FT                   /note="HC-Pro"
FT                   /db_xref="GOA:Q9QPN2"
FT                   /db_xref="InterPro:IPR001456"
FT                   /db_xref="InterPro:IPR031159"
FT                   /db_xref="InterPro:IPR042308"
FT                   /db_xref="UniProtKB/TrEMBL:Q9QPN2"
FT                   /protein_id="AAD50431.1"
FT                   /translation="SNAENFWKGLDNNWARMRYPSDHTCIAGLPVEDCGRVAALMTHSI
FT                   LPCYKMTCPTCAQQYANLPTSDLFKLLHKHARDGLSRLGSDKDQLVHVSKFLETLEHLT
FT                   EPVDLNLELFNEIFKSIGEKQQAPFKNLNVLNNFFLKGKENTAHEWQIAQLSLLELSRF
FT                   QKNRTDNIKKGDISFFRNKLSAKANWNLYLSCDNQLDKNANFLWGQREYHAKRFFSNFF
FT                   EEVDPTKGYSAYEIRKHPNGTRKLSIGNLVVPLDLAEFRQRMKGDYRKQPGVSKKCTSS
FT                   KDGNYVYPCCCTTLDDGSAIESTFYPPTKKHLVIGNSGDQKYVDLPKGDSEMLYIAKQG
FT                   YCYINVFLAMLINVSEEDAKDFTKKVRDMCVPKLGTWPTMMDLATTCAQMRIFYPDVHD
FT                   AELPRILVDHDTQTCHVVDSFGSQTTGYHILKASSVSQLILFANDELESDIKHYRVG"
XX
SQ   Sequence 1368 BP; 439 A; 251 C; 304 G; 374 T; 0 other;
     tcaaatgctg agaatttttg gaagggtttg gacaacaact gggcacgaat gagataccct        60
     tcagatcata catgtatagc tggtctacca gttgaggact gcggtagggt cgctgcattg       120
     atgacacaca gcattttgcc atgttacaag atgacctgcc ccacctgtgc tcaacaatat       180
     gccaacttgc caaccagtga tttgttcaag ctgttgcaca aacatgcaag ggacggtttg       240
     agtcgattgg gatcagataa agatcaactc gtgcatgtta gtaagttctt ggaaacgttg       300
     gagcatttaa ctgaaccagt tgacttaaat ctcgagcttt ttaatgagat attcaaatcc       360
     ataggggaga agcagcaagc accattcaag aatttgaatg tcttaaacaa cttctttttg       420
     aaaggaaaag aaaatacagc tcatgaatgg cagatagctc aattgagttt gctcgaatta       480
     tcaagattcc agaagaatag aactgataat ataaagaaag gtgacatatc tttcttcagg       540
     aacaaattgt cagccaaagc aaactggaat ctgtatttat cgtgcgacaa tcagttggat       600
     aaaaatgcaa acttcctgtg gggacaaagg gagtatcatg ctaagcggtt tttctcaaac       660
     ttctttgagg aagttgatcc aacaaaggga tactcagcat atgaaatccg caagcatccg       720
     aatggaacaa ggaagctctc aattggtaac ttagttgtcc cacttgattt agctgaattt       780
     agacagagga tgaaaggtga ctataggaaa caaccagggg tcagcaaaaa gtgcacaagt       840
     tcgaaagatg gtaattatgt atatccttgt tgctgcacaa cacttgatga tggttcagcc       900
     attgaatcaa cattctatcc gccaactaaa aagcatcttg taataggcaa tagtggtgac       960
     cagaaatatg ttgatttacc aaaaggtgat tcggagatgt tgtacatcgc caagcaaggt      1020
     tactgctata tcaacgtgtt tcttgcaatg ctaattaacg ttagcgagga ggacgcaaag      1080
     gatttcacaa agaaagttcg tgacatgtgt gtgccaaagc ttggaacctg gccaactatg      1140
     atggatttgg cgactacttg tgctcaaatg agaatattct accctgacgt gcacgatgcg      1200
     gaattgccca gaatattagt tgaccatgat actcagacgt gtcacgtggt tgactctttt      1260
     ggttcgcaaa caactgggta ccatattcta aaagcatcta gtgtgtctca actcatcttg      1320
     tttgcaaatg atgagttaga atctgatata aaacactata gagttggt                   1368
//