ID AF155807; SV 2; linear; genomic DNA; STD; VRL; 2760 BP. XX AC AF155807; XX DT 21-FEB-2000 (Rel. 62, Created) DT 11-JAN-2001 (Rel. 66, Last updated, Version 4) XX DE South African cassava mosaic virus segment B, complete sequence. XX KW . XX OS South African cassava mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2760 RX PUBMED; 11125158. RA Berrie L.C., Rybicki E.P., Rey M.E.C.; RT "Complete nucleotide sequence and host range of South African cassava RT mosaic virus: further evidence for recombination amongst begomoviruses"; RL J. Gen. Virol. 82(Pt 1):53-58(2001). XX RN [2] RP 1-2760 RA Berrie L.C., Rey M.E.C., Rybicki E.P.; RT ; RL Submitted (01-JUN-1999) to the INSDC. RL Microbiology, University of the Witwatersrand, Jan Smuts Avenue, RL Johannesburg, Gauteng, South Africa XX RN [3] RC Sequence update by submitter RP 1-2760 RA Berrie L.C., Rey M.E.C., Rybicki E.P.; RT ; RL Submitted (09-JUN-2000) to the INSDC. RL Microbiology, University of the Witwatersrand, Jan Smuts Avenue, RL Johannesburg, Gauteng, South Africa XX DR MD5; 51ecf28f5759320ecfd3eaddaabc83b2. DR EuropePMC; PMC1079959; 15784145. XX CC On Jun 9, 2000 this sequence version replaced gi:7008120. XX FH Key Location/Qualifiers FH FT source 1..2760 FT /organism="South African cassava mosaic virus" FT /chromosome="B" FT /mol_type="genomic DNA" FT /db_xref="taxon:63723" FT CDS 357..1133 FT /codon_start=1 FT /gene="BV1" FT /product="BV1" FT /db_xref="GOA:Q9IN40" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR001530" FT /db_xref="UniProtKB/TrEMBL:Q9IN40" FT /protein_id="AAF34899.1" FT /translation="MYSVYRRGYKTPYRSPYGARVTPYVYRKTSGKQTSKSRVPRKLVY FT ESPKGLYTRRSLEDIHNGASLKLSQQGDYTSYVSLPCRGIEGNGGRSVDHIKLLNLRVS FT GTVNVSQVGGDDNMGERTTMRGIFFMACLVDKKPFVPEGVSILPTFNELFGEYESVYGM FT PRLKENVRHRYRVIGTSKLYITTDEDHIQKPFSLRRRLSGGKYPIWSSFKDVDNSSTGG FT NYKNINKNAILVSYVWVSLCRTTCDVYSQFVLNYVG" FT CDS complement(1262..2185) FT /codon_start=1 FT /gene="BC1" FT /product="BC1" FT /db_xref="GOA:Q9IN39" FT /db_xref="InterPro:IPR000211" FT /db_xref="UniProtKB/TrEMBL:Q9IN39" FT /protein_id="AAF34900.2" FT /translation="MDAQFTVTDNNYINSKRTEYALTNDAAPINLQFPGSFEQATMRLK FT GRCMKIDHIIIEYRNQVPFNATGSVIVEIRDNRVSLDDAAQAAFTFPIACNVDLHYFSS FT TYFSISEPSPWRIMYRVEDSNVIEGVKFASIKAKLRLSSAKHSTDIRFKPPTINILSKG FT YTKDCIDFWSVEKGETRRRLLNPTPTARSQQPITHRPITIHPGETWATRSQIGLPSSLG FT PAQLEHFRSQSMRMDPSTTPTDLDNDSTEYPYQKLHRLHTPDLDPGDSISQAQSDSVSR FT KDLETLLESTINKCLYKIKSDAPRQL" XX SQ Sequence 2760 BP; 770 A; 454 C; 741 G; 795 T; 0 other; accggatggc cgcgcccgaa aaagcagatg gaccccacaa tggtccccac gcactaaata 60 atgtcagcca atcaattgca agactggaag actcggtagt gacgcatgga gtattaagtg 120 gtttctgcac taatttggac aggcaatttt attgctatgt gtgtatcata tttttatagg 180 tgtgctactg gccaatcaaa gttaggtgat ggggcctacc ataaaaacgc aaaatatagg 240 tacgtatgta catattgatt atatttttag gtgcggatat aagaggcgcc acgtgtttac 300 aatggatatg gattgtccta taaatattgt gcatgtctcc cgttcgttaa tgcaagatgt 360 attcagttta cagacgtggg tataagactc cgtataggag tccgtatggc gctcgtgtaa 420 caccatatgt atatcgtaag acctctggta aacagacgtc taaatctcgt gtaccgcgaa 480 agttggtgta tgaatcgcca aaaggtctat atacgcgacg ctcattggag gatatccata 540 atggggcttc cttgaagttg tctcaacagg gggattatac gtcctacgtg tcactccctt 600 gtcgaggtat cgaaggtaat gggggtaggt ctgttgatca cataaaatta ttaaacttga 660 gggtttctgg gaccgtcaac gtcagtcaag tcggtggtga tgataatatg ggagagagaa 720 cgaccatgag gggtatcttc ttcatggctt gtcttgttga taagaaacct ttcgttccag 780 agggggtcag tatattgccg acgttcaatg agttgttcgg ggaatatgaa tccgtgtacg 840 gcatgcctag gttgaaggaa aacgtccgtc accggtatcg cgttattggg acatcgaaat 900 tatatataac gacggatgaa gatcacatcc aaaagccctt tagtttacgt cgaagactaa 960 gtggagggaa atatcctatt tggtcgtcgt tcaaggatgt ggataatagt agtacaggtg 1020 gtaactataa aaatataaat aagaacgcta tactagtgag ttatgtgtgg gtatcgctat 1080 gtcggaccac gtgtgatgtg tattcgcagt ttgtactgaa ttacgtcggt tgataataaa 1140 aagagataag tgtgttgaca ggaattatgt ttgaactaat gaaacatgag atgaacatta 1200 attgaaagca tatatagttt gattatgctt ttaagcaaat atggtacata tcaattgttt 1260 attacaattg ccttggtgcg tcggatttta ttttgtagag acacttgttt atggtactct 1320 caagcagtgt ctcgaggtcc tttctggaga cggagtcgga ttgggcctgt gatatcgagt 1380 cccctgggtc caaatcgggt gtgtgtaatc tgtgtagttt ctggtaagga tattctgtgg 1440 agtcgttgtc taagtccgtt ggtgttgtcg atgggtccat tctcatggac tgtgaacgaa 1500 agtgttccag ctgtgctggg cctaatgagc ttggtagccc aatctgagac cttgtggccc 1560 atgtttcgcc tggatggatg gtgatgggcc tgtgggttat gggttgttga ctacgagcag 1620 ttggagtggg atttaataat cgtcgtcttg tttctccttt ttccacggac cagaagtcta 1680 tgcagtcttt tgtgtatccc ttggataaga tgttaattgt tgggggtttg aaacgtatgt 1740 ccgtggaatg tttggccgat gataatcgga gcttggcctt gatggatgcg aatttcacgc 1800 cttctatgac gtttgagtct tcgactctgt acatgattct ccaaggggaa ggttcagaaa 1860 tcgaaaaata tgtagaagag aagtagtgga ggtccacgtt gcaagcgatg gggaaagtga 1920 atgctgcctg agctgcgtcg tcaaggctga cgcgattgtc tctgatttct acgataaccg 1980 acccagttgc gttaaatggg acctggtttc ggtattcaat tataatgtgg tcgattttca 2040 tacatcggcc tttgagtcgc atggtagcct gctcgaatga gcctgggaat tggagattga 2100 ttggtgcagc atcgtttgtt aatgcgtact cggtgcgttt gctgttgatg taattattgt 2160 ctgtgacggt aaattgggcg tccattctat gaagcaaaaa aacaaaggtt agtaaacgga 2220 gagacgagag gtataaaagt cagaacaaag ttgaaaaaat atcgtgtaga catggaagca 2280 tatatgcatt tgttatatag aataacacac gagatcagaa caaggatcat atatgttgaa 2340 ccggccgcgc agcggatagg aagtcagata aatcggcgaa caaagaaaac agtcgaatgg 2400 ggtgatgtga tgtaaaccac ttacagaagc gccgaagaag cagttcgaag tgaattcctg 2460 tgctaattag gcgaagacaa agaaataaaa gtagaactta ttgcgaaaaa aggaaaggga 2520 gcagatgtta cgcgtggtgt cgtgaaatga tatgttatta ggtgtttata taggcgtgaa 2580 taagctacac gtggtagaga gagaaagaag agagaggcga gagcaatcgg ggggcactca 2640 aagttcctag caatcggggg aatggggggc aatttatatg atgcccccca aatggcattt 2700 gtgtaatttc ttaatgaaat ttgaattgcg aacgtggaaa gcggccatcc gtataatatt 2760 //