ID AF146283; SV 1; linear; genomic RNA; STD; VRL; 3643 BP. XX AC AF146283; XX DT 21-DEC-1999 (Rel. 62, Created) DT 21-DEC-1999 (Rel. 62, Last updated, Version 1) XX DE Soil-borne rye mosaic virus strain O RNA2 20K protein, 84K protein, and DE 18K protein genes, complete cds. XX KW . XX OS Soil-borne cereal mosaic virus OC Viruses; Riboviria; Virgaviridae; Furovirus. XX RN [1] RP 1-3643 RX DOI; 10.1007/s007050050627. RX PUBMED; 10603167. RA Koenig R., Pleij C.W.A., Huth W.; RT "Molecular characterization of a new furovirus mainly infecting rye"; RL Arch. Virol. 144(11):2125-2140(1999). XX RN [2] RP 1-3643 RA Koenig R.; RT ; RL Submitted (28-APR-1999) to the INSDC. RL Institut fuer Pflanzenvirologie, Biologische Bundesanstalt fuer Land-und RL Forstwirtschaft, Messeweg 11, Braunschweig D38104, Germany XX DR MD5; 959073c8bfd158cc78e7153922d1e929. DR RFAM; RF01081; SBWMV1_UPD-PKe. DR RFAM; RF01082; SBWMV1_UPD-PKh. DR RFAM; RF01103; UPD-PKc. DR RFAM; RF01107; SBRMV1_UPD-PKf. DR RFAM; RF01109; SBRMV1_UPD-PKd. DR RFAM; RF01112; UPD-PKg. XX FH Key Location/Qualifiers FH FT source 1..3643 FT /organism="Soil-borne cereal mosaic virus" FT /chromosome="RNA2" FT /strain="O" FT /mol_type="genomic RNA" FT /db_xref="taxon:100887" FT CDS 309..2573 FT /codon_start=1 FT /transl_except=(pos:837..839,aa:OTHER) FT /product="84K protein" FT /note="coat protein; ORF2; readthrough protein" FT /db_xref="GOA:Q9JAC9" FT /db_xref="InterPro:IPR001337" FT /db_xref="UniProtKB/TrEMBL:Q9JAC9" FT /protein_id="AAF18342.1" FT /translation="MAVKNGYTGYNKELNLMASIHPFIRLGTLISQIEGWQATRASILT FT HLGIMLNGVSKLGERNFFSRQKRFGTHTQDGDEIFCDLGGEAVMQIITRLTVSLQSAKG FT EGSQTRNAKRGTTPTTNQVEGEEQGQTDQTLAISNALAEFMTFIHTKDFTTNECYTQDS FT FEAKFNLKWEGTSXRDGVSGKLRARIVEDFQNRLVLADDLGVFPRRNLSGEVIRDEPEI FT IYAELEDKLLSFESSVYHPKAVTMETEVSVLPKLQMDLETGNAEEDIETTVVTEVLIDE FT ESSYFWLYLVFLLLSILISCFIALSRWFICFLGNRGGRGGPLFRKIATALWSARLWLLS FT KAARRYGNLGIVRKRYTRAGMRRYLRDYNFQFDEWESVVDCAPSEALIVADQRMFVRAV FT NKIVDLKGDFDAIEIVKKTFLNYGVRNYKVERWLNRHTIRSALGVLSDVTRREVLTLTD FT GMLSLENATLDEVLGCDVESQRNSMYFKDIVALQFAFHLIGTPEFSDFVMAYKGTLYPC FT YVEATKRHTSILEQFHVNEDQKRRNEKALEWLLMLGQGAFVFSAAVTAGVTIFKIHKWI FT KSRMLLRALQMLPSVGGGGNEGGGRFSEEALNRFAASQTLEERIEALHTDFDTAADNME FT SFSPEDMQAEIRHVIQAHVDGTYHAADLPFLGDMSDAVVPAMADSVVDLGNVSSDVGSA FT DTSVSSVTSKVRRRAIASNTRIYPSVGNVRYSDIKSPRVSGKSGISSMKMKITSRPMLA FT S" FT CDS 309..839 FT /codon_start=1 FT /product="20K protein" FT /note="coat protein; ORF1" FT /db_xref="GOA:Q9Q9Q0" FT /db_xref="InterPro:IPR001337" FT /db_xref="InterPro:IPR036417" FT /db_xref="UniProtKB/TrEMBL:Q9Q9Q0" FT /protein_id="AAF18341.1" FT /translation="MAVKNGYTGYNKELNLMASIHPFIRLGTLISQIEGWQATRASILT FT HLGIMLNGVSKLGERNFFSRQKRFGTHTQDGDEIFCDLGGEAVMQIITRLTVSLQSAKG FT EGSQTRNAKRGTTPTTNQVEGEEQGQTDQTLAISNALAEFMTFIHTKDFTTNECYTQDS FT FEAKFNLKWEGTS" FT CDS 2643..3140 FT /codon_start=1 FT /product="18K protein" FT /note="cysteine-rich protein; ORF3" FT /db_xref="InterPro:IPR007609" FT /db_xref="InterPro:IPR016567" FT /db_xref="UniProtKB/TrEMBL:Q9Q9P9" FT /protein_id="AAF18343.1" FT /translation="MSACAFHSCDKCVDGPKNVVCVSKYRHSVYKVLGLSVVKCRLPAD FT CGVNCGMPAAFVLEDGHPRLTLDGYCGEKHKGYVISGAWRHAQLRTLNDELDKLEKRGE FT FLKTQIRVLSETANANTAPVYAPKKINRMKAEVQDVNVKIQDRSTALAGVMDAVALNLS FT PK" XX SQ Sequence 3643 BP; 982 A; 633 C; 952 G; 1076 T; 0 other; agtgttaact cttcttgtga tatttacctt tcttaccagg ataagaaata aaatattttc 60 tgggttatca ttatcttgaa acttagcaga gactaacatc tcgctgctct aggcatgcaa 120 ctttgcaata aatcctaggt agtcagctgt tagcgtgtga cgttgaagga tagtggtatt 180 tcggttcgct ggataagctc acgagactta aaggtgaggt cgataagtcc ttacaaaagg 240 ctgcggataa ggttactgct gaaagtactg aatcgtcgca atcgaaagtg gttgtgcagt 300 tacctcagat ggctgtcaag aacggttata cgggttacaa caaggaattg aatttgatgg 360 cttctattca tcctttcatt aggctgggta ctttgataag tcagatagaa ggatggcaag 420 caacacgagc tagcatactt actcatttag gtataatgct caacggcgtt agtaagttag 480 gtgagcgaaa tttcttctcc agacagaaaa gatttgggac acacactcag gatggtgacg 540 agatattttg cgaccttgga ggtgaggcag ttatgcagat catcaccaga ctcacagtat 600 cactacaatc cgcaaagggt gagggttccc agaccagaaa tgctaagaga gggacgacac 660 cgactaccaa ccaagttgag ggtgaggagc aaggtcaaac tgatcagacg ttagccatct 720 cgaatgcgct ggctgaattt atgactttca tccacactaa agatttcacg acgaatgagt 780 gttacacgca agactctttt gaagccaaat ttaatttgaa gtgggaaggt acgagttgac 840 gggacggcgt ctcgggaaag ttgagggcac gcattgtcga agatttccag aataggctgg 900 ttttggccga cgatttgggt gtttttccga gacgcaatct tagcggtgag gtgataaggg 960 acgagcctga aataatatat gcagaactag aggacaagct cttgagcttt gagagttctg 1020 tatatcatcc taaagctgtg actatggaga ccgaagtgtc tgtattgccg aaattgcaaa 1080 tggatcttga aacaggtaac gctgaagaag acattgagac aactgtagtt actgaggtac 1140 tcatcgatga ggagagcagt tacttttggt tatacctcgt atttctctta ttgtctatcc 1200 ttatatcgtg tttcattgcg ctgtcgcgat ggtttatatg ttttctcggt aatagaggag 1260 ggcgcggtgg ccctctcttt cgaaaaatcg ccactgcatt gtggagcgca cgactatggc 1320 tgttaagtaa ggcggccaga cgttacggta atcttggaat cgtacgaaag agatatacac 1380 gtgctggcat gcgcaggtac ttgcgtgatt ataatttcca atttgatgaa tgggaaagcg 1440 tggttgactg tgctccgagt gaagctctaa tcgtcgcaga tcagagaatg tttgtgaggg 1500 ctgtgaacaa gattgtggat ttaaagggtg attttgatgc tattgaaatt gtcaagaaga 1560 ctttcctgaa ttacggagtc cgcaattaca aggtggaaag atggttgaac aggcatacaa 1620 tacgctctgc actcggtgtg ctgagcgatg ttacgaggag agaagtactt acattaactg 1680 atggtatgct atcattggag aacgctacgc ttgatgaggt actggggtgt gatgttgaga 1740 gtcaacgaaa tagcatgtac tttaaggaca ttgttgcctt gcagtttgct tttcatctta 1800 ttggtacacc agaattctcc gactttgtga tggcttacaa aggtactttg tatccttgtt 1860 atgtggaagc aactaagaga catacttcga tattggagca gtttcatgtt aacgaagatc 1920 agaagagaag aaatgagaag gcgttggaat ggttgcttat gctggggcaa ggtgctttcg 1980 ttttttctgc cgctgtaaca gctggcgtta cgatcttcaa gattcataaa tggataaaaa 2040 gtcgtatgct cttaagggct ctgcagatgc taccgtctgt tgggggtggt ggtaacgaag 2100 gtggcggtag attttctgag gaagctctaa acagatttgc ggcaagtcaa actcttgagg 2160 aacgtattga ggctctgcat actgatttcg acacggctgc tgataacatg gaaagttttt 2220 caccagaaga catgcaggct gagattagac atgttattca ggctcacgtc gatggaactt 2280 atcacgcagc agatcttcct tttctgggcg acatgtctga tgctgttgtt cctgctatgg 2340 cagattctgt tgtcgatttg ggtaatgtta gtagtgatgt gggtagtgcg gatacgtctg 2400 tctcaagtgt gactagtaag gttagacgtc gtgctattgc tagcaacaca aggatttacc 2460 cgagtgttgg taatgttagg tatagtgata ttaagtcacc gagggttagt ggaaaaagtg 2520 gaattagtag tatgaaaatg aaaatcacta gtaggcctat gttggcgtcc tagtgtgttg 2580 tttttaaaaa tacttgttca cactattacc gctagtcttt ctcggttttt cttcctaaca 2640 ttatgtcggc ttgcgctttt cactcttgtg acaagtgtgt tgatggaccc aagaacgttg 2700 tatgtgttag taaataccgt catagtgttt ataaggtttt gggcctctct gttgttaagt 2760 gtcgtctgcc tgcagattgt ggtgttaatt gtggtatgcc tgcagctttt gttctcgaag 2820 atgggcatcc tagactaact cttgatggtt actgtggtga gaaacacaaa ggttacgtga 2880 tttctggtgc ttggcgacat gcgcaacttc gtactttaaa tgatgaactt gataagttgg 2940 agaagagggg ggagtttttg aaaactcaga taagagtgct cagtgaaact gctaacgcta 3000 acactgctcc tgtatatgct cccaagaaaa ttaatcgtat gaaggcggaa gttcaggatg 3060 ttaatgtaaa aatccaggac cgtagtactg ctcttgcagg tgtcatggat gctgtcgcgt 3120 tgaatttatc accgaaatag ttcgccgcgg aagtgtggag ccatatgatg agtacgttga 3180 cgttatattt gtataatggg tatatgtgtg tactggaaaa ggtaaccagg ataaagaacc 3240 ctagcgaaaa tgtcctacca aaacattatt gtggttttgt tgtgtggttt attttgctta 3300 tattgctatg ttgcatgtgt gtgttaaaaa tagtctaaca tgtcgggcag agacatgtcg 3360 ttgccgtcac gatagacgga gccgctggga ttgcggatta taaatcgaac aagcctattt 3420 gtacgggtcg agtacaaacg tggccatcac gatagatggt tctgtttttc gaacagatgt 3480 aaatcggagg cgtcgtgcag tacggtaaac tgcacatcta tcctctagtt tctattgatg 3540 taattgaaaa aagatcaata ttttacgatg atgaggagcg actggtggtc gcggtagctt 3600 tgacacagct actaagaggg gttcaaatcc ccccccgaac cgg 3643 //