ID AF146278; SV 1; linear; genomic RNA; STD; VRL; 7026 BP. XX AC AF146278; XX DT 21-DEC-1999 (Rel. 62, Created) DT 21-DEC-1999 (Rel. 62, Last updated, Version 1) XX DE Soil-borne rye mosaic virus strain G RNA1 148K protein, 207K protein, and DE 37K protein genes, complete cds. XX KW . XX OS Soil-borne cereal mosaic virus OC Viruses; Riboviria; Virgaviridae; Furovirus. XX RN [1] RP 1-7026 RX DOI; 10.1007/s007050050627. RX PUBMED; 10603167. RA Koenig R., Pleij C.W.A., Huth W.; RT "Molecular characterization of a new furovirus mainly infecting rye"; RL Arch. Virol. 144(11):2125-2140(1999). XX RN [2] RP 1-7026 RA Koenig R.; RT ; RL Submitted (28-APR-1999) to the INSDC. RL Institut fuer Pflanzenvirologie, Biologische Bundesanstalt fuer Land-und RL Forstwirtschaft, Messeweg 11, Braunschweig D38104, Germany XX DR MD5; b4c4009be02614c94f2f3197bf3fd130. DR RFAM; RF01081; SBWMV1_UPD-PKe. DR RFAM; RF01082; SBWMV1_UPD-PKh. DR RFAM; RF01103; UPD-PKc. DR RFAM; RF01107; SBRMV1_UPD-PKf. DR RFAM; RF01109; SBRMV1_UPD-PKd. DR RFAM; RF01112; UPD-PKg. XX FH Key Location/Qualifiers FH FT source 1..7026 FT /organism="Soil-borne cereal mosaic virus" FT /chromosome="RNA1" FT /strain="G" FT /mol_type="genomic RNA" FT /db_xref="taxon:100887" FT CDS 109..5559 FT /codon_start=1 FT /transl_except=(pos:4033..4035,aa:OTHER) FT /product="207K protein" FT /note="putative replicase; ORF2; readthrough protein" FT /db_xref="GOA:Q9JAD4" FT /db_xref="InterPro:IPR001788" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR013664" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q9JAD4" FT /protein_id="AAF18327.1" FT /translation="MPIDSSSILGIISEEDVVRAAISTSATKFGSQLHGTVCDHVKETY FT LDAVERQKIKKKIDVRRDLSQEQLQLLNDLYPERHIVSSNCERGTHSFAAASRKIETDL FT LLSRIPKKAWVYDIGGNWATHVKRNDGRKVHCCCPTLDIRDAGRKTTRWASIEKYQDEK FT ETIPVEIGEKLKRIQADENSIYANLKAGRCQPEDLNGKWYCGNKFEECVFTAERAYAMA FT IHSIYDIDLMDLANALEEKRIRIMSGTFLFSVDLLLGKKQGRLPTMDGFFEVEGDYVKY FT GFHNDTNPGYKHKLSQLMKYLTKTFVTAKGGSIYYLELTELRGDVMFFTMTDATEARMN FT GVVQDESFKCIPIEDNGNVVFPLFEVDKRSDTLCFSEILLPRDFVQRAVEYTGRLKGNQ FT LTAENVNTYLTSTNNTIIIGGSSKKNVNKVDSLLIAQITTTLVVWTELMHARQKRVMEL FT LRLQMKDDVDFKSLAHAAFLKVFGKVSFYQKALRSFANWISYCHGSDAIHFRPVPLYVE FT ITDRVKLWKTYAPNQGFVLDMEDLDEKIKLHEITEREKYDVSRHIVSTKLGELATGDYG FT ASEKVCDMTCTDSRRKTDFGDLLEGEVATNFIDSWCEKDDHFNFSYDGAESKYAWCAKL FT LRMVLDTLIPPMEFAPVYVDDKDVSIRIASRIEKSEENDAEVTTDGTSGFVGTERRKFD FT AAVDFLMVAGNKTTDKLKAQRTEVVAVANAVVAQNKLYTESEVSNAVKLWADVDDEFLE FT EEETAAPVADITDLASVNEENFENLQLGSSSNSTSAVVARENLSVGNDMGTAAVTSDGC FT STEGELREKSWASLAEEESDSSYYLTTAIISGKVQKNALPKAPDFSKYATFQAKAKQEA FT LWYLQCKIVSDRTTLRSIIDDHLRGMFHNDTCELPKDSAFLDYTTDNGGAWMYGKPSRF FT GHSYGVGFSLNSKQEITKCELVKLMWNYDGKGQISQKPVNTKAFSYLLLSDLTFMMNEL FT LIFCNLQKVIRKKERTKHALITLRDGVPGCGKSTWIVENANPMKDMVLSMCKEATEDLK FT EKFAKRLKCTETALRRVRTVDSFLMHDYDKFRAATVHFDEALMAHAGMVYFCADILGAK FT RVLCQGDSQQIPFINRVESITLKYAKLQIDDTEYVRLTYRSPIDVAHYLTKKSYYSGGR FT VLTKNTTLRSMNTVGPRGAKPMTSVHCVPYQRDTQYLTFTQSEKSDLYKALRNRGPVNV FT NTVHETQGKTFDDVIVVRLKTTENEIYPGGRKAQPYEIVATTRHRRSLVYYTAIEDRLF FT SDINDMRDVMEDKLMKNLSSELVKXRFGSKYESILICDREVRVPDVGNSVILQDFYDRV FT LPGNSTMDSHFDGYEVATTDITIEVENCKVHPHKNVKVWQDKRGLVPVLRTAMPPKRQN FT GMVEALLALKKRNMAAPKLQEAVNEFEVIDRTISRARSIFLNEDMIDESLVSTRESNMR FT WWERQSHTARQQLKSEYRVLHELDLCRYSYWIKGDEKPKNDLTPQREYGALQTVVYPDK FT IVNALFGPVMKEINERIRMALKPHVVYNSRMNAEELNRTVEFLDPEDEYDAFEIDFSKF FT DKSKTSLHIRAVIELYKLFGLDDMLALLWEKSQCQTTVIDKTNGITAYLLYQQKSGNCD FT TYGSNTWSAALALLESMPLEKAKFMIFGGDDSLILFPKQLCIEDPCRRLASLWNFDCKL FT FNFRHNMFCGKFLLKIGNKFKFAPDPMKLLTKLGRKDIADGKLLSEIFVSMGDNYCSYR FT DYRILEQLAVAVQERYRTNEDPTAMLITLKKYIFDFKLLASLFNYSGGFEVCKVGRNFE FT W" FT CDS 109..4035 FT /codon_start=1 FT /product="148K protein" FT /note="putative replicase; ORF1" FT /db_xref="GOA:Q9Q9R0" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR013664" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q9Q9R0" FT /protein_id="AAF18326.1" FT /translation="MPIDSSSILGIISEEDVVRAAISTSATKFGSQLHGTVCDHVKETY FT LDAVERQKIKKKIDVRRDLSQEQLQLLNDLYPERHIVSSNCERGTHSFAAASRKIETDL FT LLSRIPKKAWVYDIGGNWATHVKRNDGRKVHCCCPTLDIRDAGRKTTRWASIEKYQDEK FT ETIPVEIGEKLKRIQADENSIYANLKAGRCQPEDLNGKWYCGNKFEECVFTAERAYAMA FT IHSIYDIDLMDLANALEEKRIRIMSGTFLFSVDLLLGKKQGRLPTMDGFFEVEGDYVKY FT GFHNDTNPGYKHKLSQLMKYLTKTFVTAKGGSIYYLELTELRGDVMFFTMTDATEARMN FT GVVQDESFKCIPIEDNGNVVFPLFEVDKRSDTLCFSEILLPRDFVQRAVEYTGRLKGNQ FT LTAENVNTYLTSTNNTIIIGGSSKKNVNKVDSLLIAQITTTLVVWTELMHARQKRVMEL FT LRLQMKDDVDFKSLAHAAFLKVFGKVSFYQKALRSFANWISYCHGSDAIHFRPVPLYVE FT ITDRVKLWKTYAPNQGFVLDMEDLDEKIKLHEITEREKYDVSRHIVSTKLGELATGDYG FT ASEKVCDMTCTDSRRKTDFGDLLEGEVATNFIDSWCEKDDHFNFSYDGAESKYAWCAKL FT LRMVLDTLIPPMEFAPVYVDDKDVSIRIASRIEKSEENDAEVTTDGTSGFVGTERRKFD FT AAVDFLMVAGNKTTDKLKAQRTEVVAVANAVVAQNKLYTESEVSNAVKLWADVDDEFLE FT EEETAAPVADITDLASVNEENFENLQLGSSSNSTSAVVARENLSVGNDMGTAAVTSDGC FT STEGELREKSWASLAEEESDSSYYLTTAIISGKVQKNALPKAPDFSKYATFQAKAKQEA FT LWYLQCKIVSDRTTLRSIIDDHLRGMFHNDTCELPKDSAFLDYTTDNGGAWMYGKPSRF FT GHSYGVGFSLNSKQEITKCELVKLMWNYDGKGQISQKPVNTKAFSYLLLSDLTFMMNEL FT LIFCNLQKVIRKKERTKHALITLRDGVPGCGKSTWIVENANPMKDMVLSMCKEATEDLK FT EKFAKRLKCTETALRRVRTVDSFLMHDYDKFRAATVHFDEALMAHAGMVYFCADILGAK FT RVLCQGDSQQIPFINRVESITLKYAKLQIDDTEYVRLTYRSPIDVAHYLTKKSYYSGGR FT VLTKNTTLRSMNTVGPRGAKPMTSVHCVPYQRDTQYLTFTQSEKSDLYKALRNRGPVNV FT NTVHETQGKTFDDVIVVRLKTTENEIYPGGRKAQPYEIVATTRHRRSLVYYTAIEDRLF FT SDINDMRDVMEDKLMKNLSSELVK" FT CDS 5621..6601 FT /codon_start=1 FT /product="37K protein" FT /note="putative movement protein; ORF3" FT /db_xref="InterPro:IPR000603" FT /db_xref="UniProtKB/TrEMBL:Q9Q9Q9" FT /protein_id="AAF18328.1" FT /translation="MGSKDVKGDSFESVYNKILDLQTEGAVGADSLKTNRQRSFNIENK FT YVEKALVQQDITTKMRDAWTTWTKTNKEEGTPYNMSYSCVLLNVIPTVPRGYSGTVEIS FT LIDSGLSPLENVIPDQTQMMELGNGPHVMCFFMHYGVPLNDEGRVIKLSFKIEAEMASK FT KMSVMNVYSYWTQKQGHLSVYTEPQRSTCSKLLLGYDKSLKLKTRDDVRRFVSRSLATN FT NLEQRVPQMLPNNINILKENVPLFKKESVLDLTEQEREKQKKLETLRSVNETQRRKSAQ FT EMQKRNDDLIKANVQKQKAKQFEIDENRKNHYDASGMKFGSVGSD" XX SQ Sequence 7026 BP; 2028 A; 1174 C; 1860 G; 1964 T; 0 other; ggtatttctt atcacttaac gtcgttagac aacacaagtg ttaacgaaat acagatcttg 60 tcaaacaaag gcacgcttcg gcgataaatc ctttgtttac aagacacaat gccgattgat 120 agcagttcaa tattgggtat tatcagtgag gaagatgttg tgcgggcggc tattagcact 180 agtgctacga aattcggttc gcaattgcat ggtacagtgt gtgatcatgt gaaggagaca 240 tatcttgacg cggttgaaag acagaaaata aaaaagaaaa ttgacgttcg tagggaccta 300 tcacaagagc agctgcagtt gctgaacgat ttatatcccg aacgacacat cgtttccagc 360 aattgcgaac gcggtacgca cagctttgca gcggcctctc ggaagattga aacagacttg 420 ttgttaagtc gaataccaaa aaaggcctgg gtttacgata ttggtggtaa ttgggcgaca 480 catgtgaagc ggaatgatgg taggaaggta cactgttgct gtccgacgtt ggacattcgt 540 gacgccggtc gtaagacgac tcgctgggct tctattgaga agtaccaaga cgagaaggaa 600 acgattcctg ttgaaatcgg tgaaaagctc aagaggatac aggcggacga gaatagcatc 660 tacgctaatc ttaaagctgg tagatgccaa ccagaggatc tgaatgggaa gtggtattgt 720 ggtaataaat tcgaagagtg cgtgtttacg gctgaaagag cctatgccat ggctatacac 780 agtatttatg acattgatct aatggacttg gccaacgctt tagaagaaaa acgtataagg 840 ataatgagtg gcacgttcct gttttcagtg gatctactgc ttgggaaaaa gcaggggaga 900 cttccaacga tggacggttt ctttgaggtg gaaggtgatt atgtgaagta tggttttcat 960 aatgacacca atccgggtta caagcacaaa ctgagtcagt tgatgaagta tcttacgaag 1020 acctttgtta ctgctaaagg gggttcgata tattatcttg aactgacaga gttgcgaggt 1080 gacgtgatgt tttttactat gacggacgct acggaggcta ggatgaatgg tgtggttcag 1140 gatgagtctt tcaagtgcat acctatagag gacaacggaa atgtggtgtt tcctttgttt 1200 gaagtggaca agcgtagtga tacgctttgc ttctcggaga ttttactgcc ccgtgatttt 1260 gtgcagaggg cggttgagta taccggtcgt ttgaaaggga atcaactcac tgcggaaaac 1320 gtaaacacat atctgacatc gaccaataat accattatta ttggcggttc ttcaaagaaa 1380 aatgtgaaca aggttgattc actgctgata gcacagataa ctacgacgtt ggtggtttgg 1440 actgaactga tgcatgcaag gcagaagcga gtaatggagt tgctgaggtt gcagatgaag 1500 gacgatgtgg attttaagtc tttggcacat gctgcatttc tgaaagtgtt cggtaaggtg 1560 agtttctacc aaaaggcgtt gaggagtttc gcgaattgga tttcatattg tcatggctct 1620 gacgctatac attttcgccc tgtgccactg tatgttgaaa taaccgacag agtgaagttg 1680 tggaaaactt atgcaccgaa tcaaggattc gttttggata tggaggattt ggacgaaaag 1740 ataaaactgc atgagataac cgaaagggaa aaatacgatg ttagtagaca cattgtatct 1800 actaaacttg gtgagttggc tactggagat tacggtgcat ccgaaaaagt ttgtgatatg 1860 acgtgcactg atagccggag aaaaactgat tttggtgatc tgttggaagg agaggtggcc 1920 acaaacttca ttgactcttg gtgcgagaaa gacgatcatt ttaacttttc ttatgatggt 1980 gctgaatcaa agtacgcgtg gtgtgcaaag ttgctgagaa tggtgttgga cactttgatc 2040 cctcccatgg aatttgcgcc cgtttatgtg gatgataagg acgtgtcgat tcgcattgca 2100 tcgagaattg agaagagtga agaaaatgac gctgaggtta ctactgatgg tacctctgga 2160 tttgttggca ctgagaggag aaagtttgac gctgctgtgg atttcctgat ggttgctgga 2220 aacaaaacca cggataaact gaaagctcag agaacagagg tcgttgctgt ggctaacgcg 2280 gtagtcgcgc agaataagct gtacacggaa tctgaggtgt ctaatgcagt gaagctttgg 2340 gctgatgttg atgacgaatt tctagaagaa gaagagacag ctgctcccgt ggcggacatt 2400 actgatctcg cttctgtaaa tgaagagaat tttgagaatt tgcaactggg tagttcgtct 2460 aattctacgt cagccgttgt ggcaagagag aatctgtctg tgggtaacga catgggcacc 2520 gcagctgtga ctagcgatgg ttgttcgact gagggtgaac ttagggaaaa atcttgggca 2580 tctttggcag aggaagaaag cgattcgtct tactatttaa caaccgcgat tatttcgggt 2640 aaagtgcaga aaaatgcact accaaaagct ccagattttt cgaagtatgc gacgtttcaa 2700 gcgaaggcga aacaggaggc tttgtggtac ttgcaatgca agatcgtttc tgatcgtacg 2760 accctgcgga gcatcataga cgatcatttg agaggtatgt ttcacaatga tacttgtgag 2820 ttgcctaagg attcagcttt tttggactac acgactgata acggtggcgc ttggatgtac 2880 gggaaaccgt ccagatttgg gcacagttac ggtgtgggtt tttcattgaa ttcgaagcag 2940 gaaattacca agtgtgagtt agtgaaactg atgtggaact atgatggcaa ggggcagata 3000 agtcaaaaac cggtgaacac gaaagctttt tcgtatctgt tgctgagtga cttgacattc 3060 atgatgaacg aattgctcat tttctgcaat ttgcagaagg ttatcaggaa gaaagaacgg 3120 acgaaacatg cccttattac tttacgggat ggtgttccag gttgcggcaa atctacttgg 3180 attgttgaga acgcaaaccc catgaaagat atggtattgt ccatgtgcaa ggaggcgact 3240 gaagatttga aagaaaaatt tgcgaagagg ttgaaatgta cggaaacggc gttgaggcgg 3300 gtgcgaactg tggattcttt tctgatgcat gattatgata aattcagggc agcgacggtt 3360 catttcgacg aagctctgat ggcgcatgca ggaatggttt acttctgtgc ggatattttg 3420 ggtgcaaaac gagtgctgtg ccaaggagac tcacaacaga ttccttttat aaatcgtgtt 3480 gaatctatca ctctgaaata cgcaaaattg cagattgatg atacggagta tgtgagattg 3540 acctatcggt cgcctattga tgttgcacac tatctcacga agaagtctta ttatagtgga 3600 ggtagggtgc ttacgaagaa cacaactttg aggtctatga acactgttgg ccctcgcggt 3660 gcgaagccta tgacatctgt acattgtgtt ccataccaac gtgatactca atatctgacg 3720 tttactcaat cggagaaatc tgacctttat aaggcactac gaaacagggg gccggtaaat 3780 gtgaataccg tgcacgagac acagggtaag acgttcgatg atgtaatcgt ggtgaggctg 3840 aagacgacgg aaaatgagat ttatcccggg ggaaggaagg ctcaaccata tgagattgtg 3900 gctactacga ggcacagacg ttcgttggtg tactatactg cgattgagga taggctgttt 3960 tctgatatca atgacatgag ggatgtaatg gaagacaaat tgatgaagaa ccttagctct 4020 gagttggtga aatgacggtt tgggtcgaag tatgagtcca tattgatttg tgatagggaa 4080 gtgagggtac ccgatgtggg aaattctgtt attttgcagg atttttacga cagggttcta 4140 cctggaaatt ctacaatgga ttcacacttc gacgggtatg aagtggcaac gacagacatt 4200 actatagagg ttgaaaattg taaggttcac cctcataaga atgtgaaagt ttggcaagat 4260 aaacggggtc tggttcccgt tttgcgtact gcaatgccgc caaaaaggca gaatggcatg 4320 gtggaagcac ttttggcgtt gaagaaaagg aacatggctg caccgaaact acaagaagct 4380 gtgaatgaat tcgaggtcat agatcggact attagtcgcg ctagatcaat tttcttaaat 4440 gaagacatga ttgacgaatc gttggtctca acgcgtgagt caaatatgcg atggtgggaa 4500 agacagtcac atacagctag gcagcaattg aaaagcgagt acagggtgtt gcatgagttg 4560 gacttgtgca gatattctta ctggattaaa ggggatgaaa aaccgaagaa cgatttgaca 4620 ccacaacgcg aatatggcgc tttgcagaca gttgtttatc ctgataagat tgttaatgcg 4680 ctgttcggac ctgttatgaa ggagataaat gagcgtataa gaatggcttt gaaacctcac 4740 gtggtttaca actcaaggat gaatgccgaa gagttgaatc ggactgttga atttctggat 4800 ccggaagatg agtatgacgc attcgaaata gacttttcaa aatttgacaa atcgaaaacg 4860 tcgttgcaca tacgagctgt aatagagttg tataagctgt ttggtttgga tgatatgttg 4920 gccttacttt gggagaaatc tcaatgtcag accactgtta ttgacaaaac aaacggcatt 4980 actgcttatt tgttgtacca gcagaaatct ggtaattgcg acacttatgg ttctaacacg 5040 tggtcggccg ctttggcgtt gttggagtct atgccattgg agaaagctaa atttatgatt 5100 tttggcggag atgactctct gattttattt cctaaacaac tctgcattga ggatccgtgt 5160 agacgtttgg cgtctctgtg gaacttcgat tgtaagttgt ttaactttag gcataatatg 5220 ttttgtggta agtttttatt gaagatcgga aacaagttta aattcgctcc agatccgatg 5280 aagttgttga cgaagttggg acgtaaggat attgcagatg gtaaattgct ctctgagatt 5340 tttgtttcta tgggagataa ttactgctct taccgggact atcgtatttt ggagcaactt 5400 gcggtggctg tgcaagaaag gtacaggacg aatgaagacc ctaccgcgat gttgatcact 5460 ttgaagaagt atatttttga ttttaagctg ttggctagtt tgtttaatta tagtggtggg 5520 tttgaagtgt gtaaagtggg gaggaacttt gagtggtgac tcgctgttct cgttgttttt 5580 cttttgtgta ttctattgtg ttaaacgttg tgctacagcc atgggttcaa aggatgtgaa 5640 gggtgactct tttgaaagtg tgtataacaa gattttggac ttacaaactg agggagctgt 5700 tggtgctgat agtcttaaga ccaatcgtca gaggagtttt aatatcgaga acaaatacgt 5760 agagaaagct ctggttcaac aagatattac gacaaagatg agagacgcat ggaccacttg 5820 gactaagact aataaggagg aaggaacgcc ctataatatg tcttatagct gcgtactgct 5880 gaacgtcatt ccaaccgtac cgcggggtta ttctggcaca gttgagattt cgttaattga 5940 ttcgggcctg tcaccgcttg aaaatgttat tccggatcag acgcagatga tggaacttgg 6000 gaatggaccg catgtgatgt gttttttcat gcactacggt gtaccgctca acgatgaagg 6060 cagggtgatt aagctgtcat ttaaaattga agcagaaatg gcttcaaaga agatgagtgt 6120 tatgaatgtt tactcctatt ggacgcaaaa acaaggacac ttatctgttt atactgaacc 6180 acagcgatcg acatgttcga aacttttact tggttacgac aaatcactga aattgaagac 6240 tagggatgac gtgcggcgtt ttgtttcacg atcactagca accaacaatc ttgagcaaag 6300 ggttcctcag atgcttccca acaacattaa cattcttaaa gagaacgtac ctcttttcaa 6360 aaaagagagc gtgctggatt tgacggaaca agagagagag aagcagaaaa agcttgaaac 6420 cttgagaagt gttaatgaga cgcagagacg taagagtgca caggaaatgc agaagagaaa 6480 tgatgatttg attaaggcga acgtgcaaaa gcaaaaggcc aaacaatttg aaattgatga 6540 gaatcggaaa aatcactatg atgcttcggg tatgaagttt ggttcagttg gaagtgactg 6600 agtccgtttt tcttttatgt atttgtatat gtattgtggt tttgttgtgt ggtttatttt 6660 tcgcttatat tgctatattg catgtgtgcg ttgaaaatag tctaacatgt cgggctgaga 6720 catgtcgttg ccgtcacgat agacggagcc gctgggattg cggattataa atcgaacaag 6780 cctatttgta cgggttgagt acaaacgtgg ccatcacgat agatggttct gtttttcgaa 6840 cagatgtaaa tcgaagacgt cgtgcagtac ggtaaactgc acatctatcc tctagtttct 6900 attgatgtaa ttgaaaaaag atcaatattt tacgatgatg aggagcgact ggtggtcgcg 6960 gtagctaaga cacagctact aagaggggtt caaatccccc cccgaaccgg agggttatcc 7020 ggccca 7026 //