ID AF142094; SV 1; linear; genomic RNA; STD; VRL; 4113 BP. XX AC AF142094; XX DT 06-JAN-2000 (Rel. 62, Created) DT 30-NOV-2000 (Rel. 66, Last updated, Version 2) XX DE Diaporthe ambigua RNA virus 1, complete genome. XX KW . XX OS Diaporthe ambigua RNA virus 1 OC Viruses; Riboviria; unclassified Riboviria; unclassified ssRNA viruses; OC unclassified ssRNA positive-strand viruses. XX RN [1] RP 1-4113 RX PUBMED; 11086142. RA Preisig O., Moleleki N., Smit W.A., Wingfield B.D., Wingfield M.J.; RT "A novel RNA mycovirus in a hypovirulent isolate of the plant pathogen RT Diaporthe ambigua"; RL J. Gen. Virol. 81(Pt 12):3107-3114(2000). XX RN [2] RP 1-4113 RA Preisig O., Smit W.A., Wingfield B.D., Wingfield M.J.; RT ; RL Submitted (11-APR-1999) to the INSDC. RL FABI, University of Pretoria, Lunnon Street, Pretoria 0002, South Africa XX DR MD5; 847ca67dff6efa8fa12ae410e41c19ab. XX FH Key Location/Qualifiers FH FT source 1..4113 FT /organism="Diaporthe ambigua RNA virus 1" FT /host="Diaporthe ambigua" FT /mol_type="genomic RNA" FT /db_xref="taxon:111470" FT CDS 576..2087 FT /codon_start=1 FT /product="ORF1" FT /db_xref="GOA:Q9Q9R2" FT /db_xref="UniProtKB/TrEMBL:Q9Q9R2" FT /protein_id="AAF22957.1" FT /translation="MRFFNELMMTTDIATYYSFASWYGRTFGYGVPFWFIWRDFTLYVG FT FDVPEELVAYALSLFSIAWLTTLIYFHLWATAFVAVAWFLGVVMLVRAILRFVEWFTFG FT LAPFVGGFVSSSTWVVSCLCRALMYLFFYLPPPLVAGQLLKLTLSLLWSLVWESIWLPV FT DLWHLGVGSWRLGSVGWDGSNRVVQLGGFCFRIRFSDFVYPYRVLVLPGFVLGVLHVLP FT GGFWLCFPSFKFEQLGVLGSLFIYPLVETKLIFVLGWVDVAFVLPWLAAVLVGVSFSYR FT EVPFSRADLQGYLGLSEPSQDASVLSELDALLKAKSFADAEGVALVAAVGARGGVPRLR FT ARGKLACRLQALLGGRKGCVGAFFSGRWVPDLPASDRSPALNAILAVQREQVKVLGVGT FT FPTKSGVGGDYVLVESRSGDRRVILPSLLSRLCLYSSLRERDEKLLVGLRSRAVEWCRL FT EQVPDWVPLLCLSSSVADAAEISGPEVEARRRLRSSLGIDTLASF" FT CDS 2202..3680 FT /codon_start=1 FT /product="RNA dependent RNA polymerase" FT /note="ORF2; may be translated as a fusion protein together FT with the ORF1 by a readthrough of stop codon" FT /db_xref="GOA:Q9Q9R1" FT /db_xref="InterPro:IPR002166" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:Q9Q9R1" FT /protein_id="AAF22958.1" FT /translation="MFVPFPLPCEGTWLPQVHRVCPHNEVGALCRRVLAPLPAQVQERV FT SPGFSRAMGLAVGLARFYTQPRWSLERTALSYDGALRRRYLGAMDSLLDWPLDVGKDSR FT LDCFLKAEKLNTLIKRPKPRLIFPRSPRYNLVLASRLKPFEHWLWSHLTAERLGTSGRG FT RYVAKGLNLSQRARLIVKKMAGFSRCAVLEVDGKAFEAHVGPSSIEQEHRVYKAAYPGD FT STLSSLLRAQRVLKGRLPCGAKFSRNGGRASGDFNTGMGNSLIMFSCVYASLVELGYSS FT WDFLCDGDNALLFVESSDVDDLVERLPGVAVGTCGQELSLDAVTGSLSGVVFGQSKPVF FT FPSGWRLVRDPFKALSGFGCSHAWLREPKFRDEYLVGVARCELALSLGQPLLQAFCLRV FT LALFPGVVPRDHVAFRDYEFLGVSPRVLRRPEPVTWETRVSFADAFSISPERQLEIESS FT FDLVRPSGFLASDAVDSFFGADPGMAEKWFERWV" XX SQ Sequence 4113 BP; 648 A; 957 C; 1237 G; 1271 T; 0 other; gggaaatttg tgagattatc gccctaaagg ataactctca tgcgggtccg agtcccgcct 60 gggaacgata tgtcacgtca aatggtggta gggaaaccgt tgaaccacca gaccaccctg 120 gtccggcttg taggctgcgt gggctgacgg aacagcagtt ggcgaggagc tgcgctatgt 180 aataacgggt ggcccgttcc tagtcatcgt cgaggggcaa ataatcgctc ccacttcggt 240 gtcctcgatg tgaaaacaaa ctcggttttc tcgcgggttg gttacctgct ccagtgagtc 300 gattaaatgg ggattagtgc tgtagggccc cagccacagg ttcggcactg gtgtaacaac 360 cgtcacccag gccagggtgt atgttttggc caaagacacc tctagttccc tgccattccg 420 gggaaggcgg ttttccgcta ggtggagaac caggctattc tgtttgcaga ttggtgcgtg 480 ttagcctgga ctgtgggtgt cagtcaactc acctgtgaga gatggtcata gatgcctcag 540 tttaatctta gccttgaccg ggtcagcgct cccttatgcg tttcttcaac gagttaatga 600 tgacaacaga tattgccacc tattactcgt ttgcttcttg gtacgggcgg acttttggct 660 acggtgtccc tttctggttc atttggcgtg atttcaccct ttacgttggg tttgatgtcc 720 ccgaagaatt agttgcctac gctctttcgc tcttctctat agcctggttg accaccctca 780 tttacttcca tttgtgggcc actgcttttg ttgcggtggc ctggtttttg ggagtggtga 840 tgttggtcag ggctattttg aggtttgtgg agtggtttac ttttgggttg gcaccgtttg 900 tcggaggttt cgtttcgtct tctacttggg ttgtgagttg tttgtgcagg gcactcatgt 960 accttttctt ctacctgcca cctcctcttg tagctggtca actgctgaaa ctgaccctct 1020 ctcttctttg gagcctcgtt tgggagagta tttggttgcc tgtcgatttg tggcacctcg 1080 gtgtaggttc ctggcggttg ggatcagttg ggtgggatgg tagcaacaga gtcgttcaac 1140 tggggggttt ctgttttagg attcgcttca gtgattttgt ttacccctac cgggtcttgg 1200 ttcttcctgg tttcgttttg ggcgtgcttc acgtccttcc tgggggtttt tggctttgtt 1260 tcccttcctt caagttcgag cagcttgggg ttttgggttc attgttcatt tacccgctgg 1320 ttgagaccaa gttgatcttt gttctcggtt gggttgatgt tgcttttgtc ctgccttggc 1380 tggccgctgt tcttgtaggt gtttcgttct cctacaggga agttcccttt tctcgggctg 1440 atctccaagg ctacctcggc ctttcagagc ccagtcaaga tgcttcggtt ctctcagaac 1500 tggatgcgtt acttaaggca aagagtttcg cagacgcaga gggtgtcgct ctggtagcgg 1560 cagtgggtgc ccgtggtggg gttcccagac ttagggctcg cggtaaactg gcctgcaggt 1620 tgcaggcttt actggggggc aggaagggct gtgttggggc tttctttagt gggcggtggg 1680 taccagacct ccccgcttct gatcgctcac cagctttgaa cgctatcctg gcagttcagc 1740 gtgagcaagt caaagtgcta ggtgtcggca catttccaac gaagtctggc gtgggagggg 1800 actatgtttt ggttgagtcc cgcagtggtg accggcgtgt catactgcct tcgctccttt 1860 ccaggctatg cctgtactca tcattgcgtg agcgtgatga gaagttgctt gttggtctgc 1920 gttctcgtgc agtcgagtgg tgtaggttgg agcaggtgcc cgattgggta cctttgcttt 1980 gcctgtcctc ttcggttgcc gatgctgctg aaatctctgg tccggaggtt gaggcaaggc 2040 gcagattacg cagcagcctt ggcatagaca ccctggcatc attttaggga tgcccagtct 2100 attttcgtgg cttgtgcgat ggggtcttgc ctgtcgcctc aagcggtcac ctggacacac 2160 gtttggtaga ttggggctct tgtgatgatt ccagtaggtc catgtttgtg ccatttcccc 2220 ttccgtgcga gggaacttgg cttcctcagg tgcatcgggt ttgtccccac aacgaggttg 2280 gtgcgctctg ccgtagagtg cttgccccgt tgccagcaca ggttcaagag agggtttcac 2340 ctgggttttc tagggctatg ggccttgcgg ttggactcgc aaggttctac acccagccca 2400 ggtggtctct tgaacggact gctttgagtt atgatggggc tcttcggaga aggtacctgg 2460 gcgctatgga ttctttgctt gactggcctc ttgatgtcgg caaggattcc aggctggatt 2520 gcttccttaa agcggagaag cttaacactt tgatcaaacg gcctaagcct aggttgattt 2580 ttcccagatc gcctaggtat aatcttgtgt tggcttctcg gcttaagcct tttgaacatt 2640 ggctttggtc gcatctcaca gccgagcgcc tgggtacctc aggtaggggt agatatgtcg 2700 ctaaggggct taacttgtct caacgagcac ggcttatagt taagaaaatg gctggtttca 2760 gtcgttgcgc tgtgctcgag gttgatggca aggcttttga agcccatgtc ggcccctctt 2820 ctattgagca agaacatcgt gtttacaagg ctgcctatcc tggtgatagc acgttgtcgt 2880 cacttttgcg ggcgcaacgt gttttgaagg gtaggttgcc ttgtggcgcg aagttctctc 2940 gtaacggagg acgtgcttct ggtgacttta acactggtat gggcaattcc ctgatcatgt 3000 tttcctgtgt ttatgcctcg cttgttgagt tggggtattc ttcttgggat ttcttgtgtg 3060 atggggacaa tgccctgctt tttgtggagt catcagatgt cgatgatctc gtggagcgtt 3120 tgccgggggt cgccgtcggg acgtgtggac aggagctttc tttggatgct gtcacgggtt 3180 ctctttcggg ggttgttttc gggcagtcta agcctgtttt ctttccttcc ggttggaggc 3240 tggtgaggga tcctttcaaa gctttgtctg gttttggttg ctctcatgct tggttgcgtg 3300 agccgaagtt tcgtgacgag tacctggtgg gagttgccag gtgtgagctc gcgttgtctt 3360 tgggtcaacc tcttcttcag gcgttctgtc tgcgtgtctt ggcgcttttc cccggtgttg 3420 ttccccgtga tcatgttgct ttccgtgatt acgagttcct gggtgtatca cccagggtgc 3480 tccgtagacc cgaacccgtg acctgggaga ccagggtctc ctttgctgat gctttttcca 3540 tctcaccgga gcggcagttg gagattgagt cttcttttga tcttgtgcgc ccgagcgggt 3600 ttcttgcctc ggacgctgtg gactctttct tcggtgctga tccgggcatg gcagagaagt 3660 ggtttgaacg atgggtgtag gtgggggtgc agttaatact agtggaagtt accctgttta 3720 gctggggggg ctgcggccct tggagcagtg caattcagtt tagcgcgtcc tttaccttgt 3780 gtttgctcgg ctcagtacac gaagtcaggt ggacagcagc catcggcctg cagtgcaatt 3840 cagtttagcg cggggcgggt ggactggggc tgataccctg ggtcaacgtg actcctgacg 3900 ggctgtgtta ccccacctct cccaggactg tatgctttgg actaccaagt cagtgagacc 3960 tgggcttggt cagtattcgt ggtcgtttga cctaggcatg tctttaaact gctgggagcc 4020 aggtggtccc tcccacacac tgaagtcggt accggcattg ggccagtgtg tggttagtca 4080 attttgtttc aggttctccg gatcctgtgg ccc 4113 //