ID AF136222; SV 2; circular; genomic DNA; STD; VRL; 2744 BP. XX AC AF136222; XX DT 07-JUN-1999 (Rel. 59, Created) DT 04-JAN-2006 (Rel. 86, Last updated, Version 8) XX DE Tomato leaf curl Philippines virus - [LB] isolate Los Banos 1 segment A, DE complete sequence. XX KW . XX OS Tomato leaf curl Philippines virus - [LB] OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-539,1942-2744 RA Shih S.L., Dolores L.M., Nakhla M.K., Maxwell D.P., Green S.K.; RT "A new geminivirus associated with a leaf curl disease of tomato in the RT Philippines"; RL Zhi Wu Bao Hu Xue Hui Hui Kan 39(4):394-395(1997). XX RN [2] RP 1-539,1942-2744 RA Zeidan M., Green S.K., Maxwell D.P., Nakhla M.K., Czosnek H.; RT "Molecular analysis of whitefly-transmitted tomato geminiviruses from RT Southeast and East Asia"; RL Trop. Agric. Res. 1(2):107-115(1998). XX RN [3] RP 1-539,1942-2744 RA Shih S.L., Dolores L.M., Nakhla M.K., Maxwell D.P., Green S.K.; RT ; RL Submitted (19-MAR-1999) to the INSDC. RL Plant Pathology, University of Wisconsin-Madison, 1630 Linden Dr., Madison, RL WI 53706-1598, USA XX RN [4] RC Sequence update by submitter RP 1-2744 RA Shih S.L., Dolores L.M., Nakhla M.K., Maxwell D.P., Green S.K.; RT ; RL Submitted (29-JUN-2005) to the INSDC. RL Virology Unit, Asian Vegetable Research and Development Center, P.O. Box RL 42, Shanhua, Tainan, Taiwan, Republic of China XX DR MD5; 8c330a557543dc9bd0c231c29782b64e. DR EuropePMC; PMC2170441; 17963488. XX CC On Jan 3, 2006 this sequence version replaced gi:5002130. XX FH Key Location/Qualifiers FH FT source 1..2744 FT /organism="Tomato leaf curl Philippines virus - [LB]" FT /segment="A" FT /host="tomato plant" FT /isolate="Los Banos 1" FT /mol_type="genomic DNA" FT /country="Philippines:Los Banos" FT /collection_date="Jun-1995" FT /db_xref="taxon:270142" FT gene 143..496 FT /gene="V2" FT CDS 143..496 FT /codon_start=1 FT /gene="V2" FT /product="precoat protein" FT /db_xref="GOA:Q9WPL9" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q9WPL9" FT /protein_id="AAD37322.1" FT /translation="MWDPLVHPFPESLHGFRCMLANQISSELNRKYSPDTVGHEFWKDF FT ICIWRSKNYAEAFNRYSNVVANVDNTSKAQLRESVQSPCFCPHCPRHVLQAKVMDLQAH FT VSQAQDVQNVSKP" FT gene 258..1079 FT /gene="V1" FT CDS 258..1079 FT /codon_start=1 FT /gene="V1" FT /product="coat protein" FT /db_xref="GOA:Q9WPL8" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q9WPL8" FT /protein_id="AAD37323.2" FT /translation="MSFGKILYAYGEVRIMPKRSIDTVTSLPMSITRRRLNYGSQYSLP FT ASVPTVPDMSYKRRSWTYRPMFRKPKMYRMYRSRDVPRGCEGPCKVQSYEQRHDIAHVG FT KVICVSDVTRGNGLTHRVGKRFCVKSVYVLGKVWMDENIKTKNHTNTVMFFLVRDRRPY FT GTPQDFGQVFNMYDNEPSTATVKNDNRDRYQVLRKFQAIVTGGQYASKEQAIVKRFMKI FT NNHVTYNHQEAAKYDNHTENALLLYMACTHASNPVYATLKIRIYFYDSVQN" FT gene complement(1076..1477) FT /gene="C3" FT CDS complement(1076..1477) FT /codon_start=1 FT /gene="C3" FT /product="C3 protein" FT /db_xref="GOA:Q2PDL4" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q2PDL4" FT /protein_id="ABC54994.1" FT /translation="MDSRTGEPITAAQGENGVYTWTITNPLYFQISQHDKMPFLKNHDI FT ITVQIQFNHNLRKALGIHQCFLICQIWTHLHPQTWRFLRVFKYQCMKYLYSLGVISINN FT VIRAIKHVLFDVIKTIDVQISHIIKFSIY" FT gene complement(1218..1625) FT /gene="C2" FT CDS complement(1218..1625) FT /codon_start=1 FT /gene="C2" FT /product="C2 protein" FT /db_xref="GOA:Q2PDL3" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q2PDL3" FT /protein_id="ABC54995.1" FT /translation="MQNSSPSHNHCTQVPIKVQHKIAKRRPIRRRRIDLPCGCSYYLGL FT NCASYGFSHRGTHHCSSGREWRIYLDDNKSPLFPDIPTRQDAVLEKPRHHNSTDTVQPQ FT PEESVGNSSMFSDLPNLDSFTSSDLAFLKSI" FT gene complement(1531..2613) FT /gene="C1" FT CDS complement(1531..2613) FT /codon_start=1 FT /gene="C1" FT /product="replication-associated protein" FT /db_xref="GOA:Q9WPM0" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q9WPM0" FT /protein_id="AAD37321.2" FT /translation="MAPPRPFKINAKNYFLTYPQCSLTKEDALSQLQNLNTPTNKKFIK FT ICRELHEDGSPHLHVLIQFERKYQCQIQRFFDLVSPTRSAHFHPNIQGAKSSSDVKSYI FT DKDGDTLEWGEFQVDGRSARGGQQSANDAYAKAINTGSKSEALNVIRELAPKDFVLQFH FT NLSANLDRIFAPPLEVFVSPFPSSSFNQVPKELEEWVSENVRDAAARPWRPKSIVLEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKVYNNDSWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPTSSYKEYLDEDKNSPLKDWALKNAEFITIAQPL FT YSSTHQSPTQNSQAATNTQA" FT gene complement(2166..2456) FT /gene="C4" FT CDS complement(2166..2456) FT /codon_start=1 FT /gene="C4" FT /product="C4 protein" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:Q2PDL2" FT /protein_id="ABC54996.1" FT /translation="MGALISTCLSNSRENTSARSSDSSTWYPQPGQHISIRTFRELNPA FT PTSSPISTRTETPSNGESFRSTEDLQEGDNNQPMTLTPKRLTQEVSQRLLM" XX SQ Sequence 2744 BP; 732 A; 535 C; 604 G; 873 T; 0 other; accgtgggcc gcgcaaattt tttttatatt gggcctaatg gtccttttgg atgtcgggct 60 cgaccaatgg aaacgttccc tcatcgctta tttattaatt ggtcccctat ttaacccttg 120 gtggctacgt ttttctttaa aaatgtggga tcctctggta catccctttc ctgaaagctt 180 acacggcttc agatgtatgc ttgccaatca aatatcttca gagcttaaca gaaaatattc 240 tccagacact gttgggcatg agttttggaa agattttata tgcatatggc gaagtaagaa 300 ttatgccgaa gcgttcaata gatacagtaa cgtcgttgcc aatgtcgata acacgtcgaa 360 ggctcaacta cgggagtcag tacagtctcc ctgcttctgt ccccactgtc ccagacatgt 420 cttacaagcg aaggtcatgg acttacaggc ccatgtttcg caagcccaag atgtacagaa 480 tgtatcgaag ccgtgatgtt cctcgtgggt gtgaaggccc atgtaaggtt cagtcttatg 540 aacagcgtca tgatatagcc catgtgggta aggtcatatg tgtgtctgat gttactcgtg 600 gtaatgggct cacacatcgt gttggaaaga ggttttgtgt aaagtctgtg tatgtgttgg 660 ggaaggtctg gatggatgag aacatcaaga ctaagaatca cactaacact gtcatgtttt 720 ttttagttcg tgataggaga ccctatggga ctccccagga ttttggtcag gtttttaaca 780 tgtatgataa tgagcctagt actgcaactg taaaaaatga taatagagat cgatatcaag 840 ttcttcgtaa atttcaagct atcgtgactg gaggtcagta tgcaagcaag gagcaagcaa 900 tagtcaagag gttcatgaag attaacaacc atgttactta caatcatcaa gaggctgcga 960 agtatgataa ccatacagag aacgctttac tgttgtatat ggcttgtact catgctagta 1020 atccagtgta tgctacgttg aaaatcagaa tctattttta tgattctgtt cagaattaat 1080 aaatactgaa ttttattata tgagaaattt gtacatctat tgttttaatt acatcgaaca 1140 gtacatgctt gatagcccta attacattgt ttatgctaat aactcctaaa ctatacaaat 1200 acttcataca ctgatattta aatactctta agaaacgcca agtctgagga tgtaaatgag 1260 tccagatttg gcagatcaga aaacattgat gaattcccaa cgctttcctc aggttgtggt 1320 tgaactgtat ctgtactgtt atgatgtcgt ggtttttcaa gaacggcatc ttgtcgtgtt 1380 gggatatctg gaaataaagg ggatttgtta tcgtccaggt atatacgcca ttctctccct 1440 gagctgcagt gatgggttcc cctgtgcgag aatccatacg aagcacaatt aagtcctaaa 1500 tagtaagagc agccgcaagg aagatcaatt ctacgcctgc gtattggtcg ccgcttggct 1560 attttgtgtt ggactttgat gggtacttga gtacaatggt tgtgcgatgg tgatgaattc 1620 tgcattcttt agcgcccagt ctttgagtgg agaattctta tcctcatcca agtactcttt 1680 atacgacgac gtaggtcctg gattgcatag gaagattgtt gggattccac ctttaatttg 1740 aattggtttc ccgtacttcg tgttgctttg ccagtctctt tgggccccca taaactcttt 1800 aaaatgcttt agatagtggg ggtctacgtc atcaatgacg ttgtaccacg aatcattatt 1860 gtagaccttt ggactcaggt ccagatgtcc acataaataa ttatgtggtc ccagtgatct 1920 agcccacatc gtcttccccg ttcgactatc gccctctagt acaatacttt taggtctcca 1980 aggccgcgca gcggcatccc ttacattctc ggacacccat tcttcaagtt cttttggaac 2040 ttgattgaaa gatgaagaag gaaaaggact aacaaaaacc tctaaaggag gtgcaaaaat 2100 cctatctaaa tttgcactta aattatgaaa ctgtaaaaca aaatcttttg gtgctaattc 2160 cctaattaca ttaagagcct ctgacttact tcctgtgtta atcgctttgg cgtaagcgtc 2220 attggctgat tgttgtcccc ctcttgcaga tcttccgtcg acctgaaact ctccccattc 2280 gagggtgtct ccgtccttgt cgatatagga cttgacgtcg gagctggatt tagctccctg 2340 aatgttcgga tggaaatgtg ctgacctggt tggggatacc aagtcgaaga atcgctggat 2400 ctggcactgg tattttctct cgaattggat aagcacgtgg agatgagggc tcccatcttc 2460 gtgtaattct cgacagatct ttatgaattt tttatttgtt ggtgtattta ggttttgtaa 2520 ttgggaaagt gcatcttctt tagtaagaga gcactgtgga taagtgagga aataattttt 2580 ggcatttatt ttaaatggtc ttggaggagc cattgacttg gtcaatcggt gtctctacta 2640 atgctctagc aatcggtgta ttggagtcct atatatagtt agacaccaaa tggcataatt 2700 gtaatttttt tatgggcttc caagcggcca acgactataa tatt 2744 //