ID AF135410; SV 1; linear; genomic RNA; STD; VRL; 2958 BP. XX AC AF135410; XX DT 24-AUG-1999 (Rel. 60, Created) DT 24-AUG-1999 (Rel. 60, Last updated, Version 1) XX DE Tomato ringspot virus isolate T392 RNA1 polyprotein gene, partial cds. XX KW . XX OS Tomato ringspot virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus. XX RN [1] RP 1-2958 RA Wang A., Sanfacon H.; RT "Diversity in the coding regions for the coat protein, VPg, protease and RT putative putative RNA-dependent RNA polymerase among tomato ringspot RT nepovirus isolates"; RL Unpublished. XX RN [2] RP 1-2958 RA Wang A., Sanfacon H.; RT ; RL Submitted (17-MAR-1999) to the INSDC. RL Pacific Agri-Food Research Centre, 4200 Highway 96, Summerland, British RL Columbia V0H 1Z0, Canada XX DR MD5; 9e50769878d76516dd43eb908abb9307. DR EuropePMC; PMC2861173; 20229114. XX FH Key Location/Qualifiers FH FT source 1..2958 FT /organism="Tomato ringspot virus" FT /chromosome="RNA1" FT /isolate="T392" FT /mol_type="genomic RNA" FT /db_xref="taxon:12280" FT CDS <1..2958 FT /codon_start=1 FT /product="polyprotein" FT /note="cleaved into VPg, protease, putative RNA-dependent FT RNA-polymerase" FT /db_xref="GOA:Q9QRA6" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:Q9QRA6" FT /protein_id="AAD50652.1" FT /translation="STIPSGSYADVYNARNMTRVFRPQSVQGSSLAEAQFNESHAVNML FT VRIDLPDGNIISACRFRGKSLALTKHQALTIPPGAKIHIVYTDNNGNTKAPLTHFFQPT FT GPNGEHFLRFFNGTEVCIYSHPQLSALPGAPQNYFLKDVEKISGDIAIKGCGIKLGSTS FT VGECVGVKDNEPVLNHWRAVARVRTTKITIDNYAEGGDYSNDLPTSIISEYVNSPEDCG FT ALLVAHLEGGYKIIGMHVAGSSYPVEVDGVQMPRYISHASFFPDYSSFAPCQSSVIKSL FT IQEAGVEERGVSKVGHIKDPAETPHVGGKTKLELVDEAFLVPSPVEVKIPSILSKDDPR FT IPEAYKGYDPLGDAMEKFYEPMLDLDEDVLENVMADMYDEFYDCQTTLRIMSDDEVING FT SDFGFKIEAVVKGTSEGYPFVLSRRPGEKGKARFLEELEPQPGDIKPKYKLVVGSEVHS FT AMVAMEQQARTEVPLLIGMDVPKDERLKPSKVLEKPKTRTFVVLPMHYNLLLRKYVGIL FT CSSMQVNRHRLACAVGTNPYSRDWTDIYQRLAEKNSVALNCDYSRFDGLLNYQAYVHIV FT NFINKLYNDEHSIVRGNLLMAMYGRWSVCGQRVFEVRAGMPSGCALTVIINSLFNEMLI FT RYVYRITVPRPLVNNFKQEVCLIVYGDDNLISIKPDTMKYFNGEQIKTILANIKVTITD FT GSDKNSPVLRAKPLKQLDFLKRGFRVESDGRVLAPLDLQAIYSSLYYINPQGNILNSLF FT LNAQVALRELYLHGDVEQFTAVRNFYVNQIGGNFLSLPQWRHCASFHDEQYSQWKPWSP FT VKFLEVDVPDAKFLQHKAPATALSIVLDRLAVAGPGWRNKDPDRYLLVSLTSLKANEGG FT LYFPVDYGEGTGQQATEASIRAYRRLKDHRVRHMRDSWNEGKTVVFRCEGPFVSGWAAA FT ISFGTSVGMNAQDLLINYGIQGGAHKEYLGRYFISARFRELERYDRPFQPRVIAS" XX SQ Sequence 2958 BP; 753 A; 603 C; 727 G; 875 T; 0 other; tcgacgattc cctctggcag ttatgcagac gtgtacaatg cacgcaacat gacacgcgtt 60 ttccggccac aatctgtaca gggttcttct ttggcggaag cgcaatttaa tgaatcgcac 120 gctgtgaata tgttagtgcg gattgattta cctgatggca acattatttc tgcctgcagg 180 tttcgcggga agtctttggc tttgactaaa catcaggcct taaccatacc gccaggtgct 240 aaaatccata ttgtatatac tgacaacaat ggaaatacta aagcacctct gactcatttt 300 ttccagccta ctggacctaa tggagaacat tttttgagat tcttcaacgg gacagaggtt 360 tgtatttatt cccaccctca actttcagct ttgcctggcg ctccacaaaa ttatttcttg 420 aaagatgtgg agaaaatatc tggtgacata gccattaaag gttgtggcat caagctaggc 480 agcactagcg ttggcgagtg tgttggtgtt aaggacaatg aacctgtctt aaatcactgg 540 cgcgctgtcg cgagggttcg caccaccaag atcaccatcg acaattatgc agagggtggt 600 gattattcca atgatcttcc tacgtccatc atctctgagt atgtaaattc accagaagat 660 tgtggcgcgc ttttagtcgc ccatcttgaa ggtggttaca aaatcatagg gatgcacgtg 720 gcaggatctt cttatcctgt cgaggtcgat ggagtgcaga tgccgagata tatatctcac 780 gcctccttct tccctgacta ctcttctttt gctccttgcc agtctagcgt cattaagtct 840 ctaattcaag aggctggcgt tgaggagcgt ggggtttcta aagtgggaca tattaaagat 900 cctgctgaaa cgcctcatgt tggagggaaa actaagcttg aattggttga tgaagctttt 960 ttggtgccat caccagttga agtaaagatt ccttccattc tgtccaaaga cgacccgcgc 1020 attcctgaag cgtacaaggg ttatgaccca ttgggcgatg ccatggagaa gttttatgag 1080 cccatgttgg atctagacga agatgtcttg gagaacgtta tggcagatat gtacgatgaa 1140 ttctatgatt gccaaacgac tctccgtatt atgtctgatg acgaagttat caatggcagc 1200 gattttggtt tcaaaattga agccgttgtc aaaggtactt ctgaaggcta cccgttcgtt 1260 ctgagtcggc gaccgggtga gaagggcaaa gctcgctttt tagaagagct tgaaccccaa 1320 ccaggtgaca ttaagcctaa atataaattg gttgtgggat ctgaggtgca ttctgctatg 1380 gtggcgatgg aacaacaggc gcgtactgaa gttcctttgc ttattggtat ggatgttccg 1440 aaggatgaga gactcaaacc gtctaaggtg ttggagaagc cgaagacgcg tacattcgtt 1500 gttctcccaa tgcactataa cttgctgctg cgtaagtatg tgggaatttt gtgttctagc 1560 atgcaagtta ataggcatcg tctagcatgt gctgtgggca ctaacccata ttcgcgtgat 1620 tggacggaca tttatcagcg cctggctgag aaaaattcag tggccttgaa ttgtgattat 1680 agtcgctttg atgggctcct caattaccag gcatatgtgc atattgtaaa ttttattaac 1740 aaattgtaca acgatgaaca ttctatcgtg cgtggcaatc ttttgatggc tatgtatggt 1800 aggtggagtg tgtgtgggca gagagttttc gaagtccgcg ctggcatgcc ctctgggtgt 1860 gcgctcaccg tgatcatcaa ttcacttttt aacgaaatgt tgatcaggta tgtttatcgc 1920 atcaccgtac cacgtcccct tgtaaataat tttaaacagg aggtgtgttt gattgtctat 1980 ggtgatgata atttaatttc tattaagccg gacaccatga aatattttaa tggtgagcaa 2040 atcaaaacca ttctggctaa tattaaagtt accattactg atggcagtga taagaactca 2100 cctgttctta gagccaaacc cttgaaacag ctcgattttt tgaagagagg tttcagggtt 2160 gaaagtgatg ggagggtgct tgccccttta gatttgcaag ctatttattc ttccctgtat 2220 tatatcaatc cgcagggaaa tatattaaat tctttgtttt tgaatgctca agtcgctttg 2280 agagagttat atctccatgg cgatgttgag caatttaccg cagtcaggaa tttttacgtc 2340 aatcaaattg gcggaaattt cttgagtcta ccccagtgga ggcactgcgc ttcgttccat 2400 gatgaacaat attctcagtg gaagccgtgg tctcccgtta aattcttgga ggtagatgtg 2460 cccgatgcta aatttttaca gcataaggcg ccagctactg ccctctcgat tgtgcttgat 2520 aggcttgctg ttgcaggacc tggctggcgt aataaagacc cagacaggta tctgttagtg 2580 agccttacca gcttgaaagc aaatgagggt ggattatact ttcccgtaga ctacggagag 2640 ggtacagggc agcaagccac ggaagcttcc attagagctt atcgtaggct aaaggatcat 2700 cgcgtacgcc atatgcgcga ttcctggaat gagggaaaga cagtcgtgtt tcgatgcgaa 2760 ggtccctttg tctcgggatg ggcagctgcc atttccttcg gtactagcgt tggaatgaat 2820 gcccaggatc ttttaattaa ttatggtata caaggtggcg cccacaagga atatctggga 2880 cgctacttta ttagtgctcg ttttagagag ctggagaggt atgaccgacc ttttcagcct 2940 cgtgtaattg cgagctaa 2958 //