ID AF135408; SV 1; linear; genomic RNA; STD; VRL; 2958 BP. XX AC AF135408; XX DT 24-AUG-1999 (Rel. 60, Created) DT 24-AUG-1999 (Rel. 60, Last updated, Version 1) XX DE Tomato ringspot virus isolate Peach Yellow Bud Mosaic RNA1 polyprotein DE gene, partial cds. XX KW . XX OS Tomato ringspot virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus. XX RN [1] RP 1-2958 RA Wang A., Sanfacon H.; RT "Diversity in the coding regions for the coat protein, VPg, protease and RT putative putative RNA-dependent RNA polymerase among tomato ringspot RT nepovirus isolates"; RL Unpublished. XX RN [2] RP 1-2958 RA Wang A., Sanfacon H.; RT ; RL Submitted (17-MAR-1999) to the INSDC. RL Pacific Agri-Food Research Centre, 4200 Highway 96, Summerland, British RL Columbia V0H 1Z0, Canada XX DR MD5; d0b83beee7c42c4a1bceefc32e2c64fc. XX FH Key Location/Qualifiers FH FT source 1..2958 FT /organism="Tomato ringspot virus" FT /chromosome="RNA1" FT /isolate="Peach Yellow Bud Mosaic; PYB-1" FT /mol_type="genomic RNA" FT /country="USA:California" FT /db_xref="taxon:12280" FT CDS <1..2958 FT /codon_start=1 FT /product="polyprotein" FT /note="cleaved into VPg, protease, putative RNA-dependent FT RNA-polymerase" FT /db_xref="GOA:Q9QRA8" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:Q9QRA8" FT /protein_id="AAD50650.1" FT /translation="STIPSGSYADVYNARNMTRVFRPQSVQGSSLAEAQFNESHAVNML FT VRIDLPDGNIISACRFRGKSLALTKHQALTIPPGAKIHIVYTDNNGNTKAPLTHFFQPT FT GPNGEHFLRFFNGTEVCVYSHPQLSALPGAPQNYFLKDVEKISGDIAIKGCGIKLGRTS FT VGECAGVKDNEPVLNHWRAVARVRTTKITIDNYAEGGDYSNDLPASIISEYVNSPEDCG FT ALLVAHLEGGYKIIGMHVAGSSYSVEVDGVQMPRYISHASFFPDYSSFAPCQSSVIKSL FT IQEAGVEERGVSKVGHIEDPAETPHVGGKTKLELVDEAFLVPSPVEVKIPSILSKDDPR FT IPEAYKGYDPLGDAMEKFYEPMLDLDEDVLENVMADMYDEFYDCQTTLRIMSDDRVING FT SDFGFNIEAVVKGTSEGYPFVLSRRPGEKGKARFLEELEPQPGDIKPKYKLVVGTEVHS FT AMVAMEQQARTEVPLLIGMDVPKDERLKPSKVLEKPKTRTFVVLPMHYNLLLRKYVGIL FT CSSMQVNRHRLACAVGTNPYSRDWTDIYQRLAEKNSVALNCDYSRFDGLLNYQAYVHIV FT NFINKLYNDEHSIVRGNLLMAMYGRWSVCGQRVFEVRAGMPSGCALTVIINSLFNEMLI FT RYVYRITVPRPLVNNFKQEVCLIVYGDDNLISIKPDTMKYFNGEQIKTILARYKVTITD FT GSDKNSPVLRAKPLKQLDFLKRGFRVESDGRVLAPLDLQAIYSSLYYINPQGNILNSLF FT LNAQVALRELYLHGDVEQFTAVRNFYVKQIGGNFLSLPQWRHCASFHDEQYSQWKPWSP FT VKFLEVDVPDAKFLQHKAPATALSIVADRLAVAGPGWRNKDPDRYLLVSLTSLKANEGG FT LYFPVDYGEGTGQQATEASIRAYRRLKDHRVRHMRDSWNEGKTVVFRCEGPFVSGWAAA FT ISFGTSVGMNAQDLLINYGIQGGAHKEYLGRYFISARFRELERYDRPFQPRVIAS" XX SQ Sequence 2958 BP; 747 A; 612 C; 733 G; 866 T; 0 other; tcgacgattc cctccggtag ttacgcagac gtgtacaatg cgcgcaacat gacacgcgtt 60 ttccgcccac aatctgtaca gggttcttct ttggcggaag cgcaatttaa tgaatcacac 120 gctgtgaata tgttagtgcg gattgattta cccgatggca acatcatttc tgcctgcagg 180 tttcgcggga agtctttggc tttgactaaa catcaggcct taaccatccc gccaggtgct 240 aaaatccata ttgtatatac tgacaacaat ggaaatacta aagcacctct gactcatttt 300 ttccagccta ctggacctaa tggagaacat tttttgagat tcttcaacgg gacagaggtt 360 tgtgtttatt cccaccccca actttcagct ttgcctggcg ctccacaaaa ttattttttg 420 aaagacgtgg agaaaatatc tggtgacata gccattaaag gttgtggcat caaactaggc 480 agaaccagcg ttggcgagtg tgctggtgtt aaggataacg aacctgtcct aaatcactgg 540 cgcgctgtcg cgagggttcg caccaccaag atcaccatcg acaattatgc ggagggtggt 600 gattattcca atgatcttcc tgcgtccatc atctctgagt atgtaaattc accagaagat 660 tgtggcgcgc ttttagtcgc ccatcttgaa ggtggttaca aaatcatagg gatgcacgta 720 gcaggatctt cctattccgt cgaggttgat ggagtgcaga tgccgcgata tatatctcac 780 gcctccttct tccctgacta ctcttctttt gctccttgcc agtctagcgt cattaagtct 840 ctaattcaag aggctggcgt tgaggagcgt ggggtttcta aagtgggaca tatagaggat 900 cctgctgaaa cgccccatgt tggagggaaa actaagcttg aattggttga tgaagctttt 960 ttggtgccat caccagttga ggtaaagatt ccctccattc tgtccaaaga tgacccgcgc 1020 attcctgaag cgtacaaggg ttatgatcca ttgggcgatg ccatggagaa gttttacgag 1080 cccatgttgg atctggatga agatgtcttg gagaacgtta tggcagatat gtatgatgaa 1140 ttctatgatt gccaaacgac tctccgcatt atgtctgatg acagagttat caatggcagc 1200 gattttggtt tcaatattga agccgttgtc aaaggtactt ctgaaggcta cccgttcgtt 1260 ttgagtcggc gaccgggtga gaagggcaaa gctcgctttt tagaagagct tgaaccccaa 1320 ccaggtgaca ttaagcctaa atataaattg gttgtgggca ccgaggtgca ttctgctatg 1380 gtggcgatgg aacaacaggc gcgtactgaa gttcctttgc ttattggtat ggatgttccg 1440 aaggatgaga gactcaaacc gtctaaggtg ttggagaagc cgaagacgcg tacattcgtt 1500 gttctcccaa tgcactataa cttgctgctg cggaagtatg tgggaatttt gtgttctagc 1560 atgcaagtta ataggcatcg tctagcatgt gctgtgggta ctaacccata ttcgcgggac 1620 tggacggaca tttatcagcg cctggctgag aaaaattcag tggccttaaa ttgtgattat 1680 agtcgctttg atgggctcct caattaccag gcatatgtgc atattgtaaa ttttattaac 1740 aaattgtaca acgatgaaca ttctatcgtg cgtggcaatc ttttgatggc tatgtatggt 1800 aggtggagtg tgtgtgggca gagagttttc gaagtccgcg ctggcatgcc ctctgggtgt 1860 gcgctcaccg tgatcatcaa ttcacttttt aacgaaatgt tgatcaggta tgtttatcgc 1920 atcaccgtac cacgccccct tgtaaataat tttaaacagg aggtgtgttt gattgtttat 1980 ggtgatgata atttaatttc tattaagccg gacaccatga aatattttaa tggtgagcaa 2040 atcaaaacca ttctggctag atataaagtt accattactg atggcagcga caagaactca 2100 cctgttctta gagccaaacc cttgaaacaa ctcgattttt tgaagagagg tttcagggtt 2160 gaaagtgatg ggagggtgct tgccccttta gatttgcaag ctatttattc ttccctgtat 2220 tatatcaatc cgcagggaaa tatattaaat tctttgtttt tgaatgctca agtcgctttg 2280 agagagttat atctccatgg cgatgttgag caatttaccg ctgtcaggaa tttttacgtc 2340 aagcaaattg gcggtaattt cttgagttta cctcagtgga ggcactgcgc ttcgtttcat 2400 gatgaacaat attctcagtg gaagccgtgg tctcccgtta aattcttgga ggtagatgtg 2460 cccgatgcta aatttttaca gcataaggcg ccagctactg ccctctcgat tgttgctgat 2520 aggcttgctg ttgcaggacc tggctggcgt aataaagacc cagacaggta tctgttagtg 2580 agccttacca gcttgaaagc aaatgagggt ggattatact ttcccgtaga ctacggagag 2640 ggtacagggc agcaagccac ggaagcttcc attagagctt atcgtaggct aaaggatcat 2700 cgcgtacgcc atatgcgcga ttcctggaat gagggaaaga cagtcgtgtt tcgatgcgaa 2760 ggtccctttg tctcgggatg ggcagctgcc atttccttcg gtactagcgt tggaatgaat 2820 gcccaggatc ttttaattaa ttatggtata caaggtggcg cccacaagga atatctggga 2880 cgctacttta ttagtgctcg ttttagagag ctggagaggt atgaccgacc ttttcagcct 2940 cgtgtaattg cgagctaa 2958 //