ID AF135407; SV 1; linear; genomic RNA; STD; VRL; 2958 BP. XX AC AF135407; XX DT 24-AUG-1999 (Rel. 60, Created) DT 24-AUG-1999 (Rel. 60, Last updated, Version 1) XX DE Tomato ringspot virus isolate Grape Yellow Vein RNA1 polyprotein gene, DE partial cds. XX KW . XX OS Tomato ringspot virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus. XX RN [1] RP 1-2958 RA Wang A., Sanfacon H.; RT "Diversity in the coding regions for the coat protein, VPg, protease and RT putative putative RNA-dependent RNA polymerase among tomato ringspot RT nepovirus isolates"; RL Unpublished. XX RN [2] RP 1-2958 RA Wang A., Sanfacon H.; RT ; RL Submitted (17-MAR-1999) to the INSDC. RL Pacific Agri-Food Research Centre, 4200 Highway 96, Summerland, British RL Columbia V0H 1Z0, Canada XX DR MD5; e64a20fc0a6fb8401c5d44da5c9a7d2d. DR EuropePMC; PMC2861173; 20229114. XX FH Key Location/Qualifiers FH FT source 1..2958 FT /organism="Tomato ringspot virus" FT /chromosome="RNA1" FT /isolate="Grape Yellow Vein; GYV" FT /mol_type="genomic RNA" FT /country="USA:California" FT /db_xref="taxon:12280" FT CDS <1..2958 FT /codon_start=1 FT /product="polyprotein" FT /note="cleaved into VPg, protease, putative RNA-dependent FT RNA-polymerase" FT /db_xref="GOA:Q9QRA9" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR007094" FT /db_xref="UniProtKB/TrEMBL:Q9QRA9" FT /protein_id="AAD50649.1" FT /translation="STIPSGSYADVYNARNMTRVFRPQSVQSSKLAEDQFNESHAVNML FT VRIDLPDGNIISACRFRGKSLALTKHQAMTIPPGAKLHIVYTDNNGNTTAPITHFFQPT FT GPKGEQFLRFFNGTEVCIYSHPQLSALPGAPQNYFLKDVEKLSGDIAIKGCGIKLGRTS FT VGVGDSVKDNEPVLNHWRAVARVRTTMLTIDNYAEGGDYCNSLPTSLISEYVNSPEDCG FT ALIVAHLEGGYKIIGMHVAGSSYPVEVDGVRVNRYISHASFFPDYASFAPCQSNCIKSL FT VREAGVEERGVSKVGHIKDPAETPHVGGKTKLELVDEAFLVPSPVEVKIPSILSKDDPR FT IPETYKGYDPLGDAMEKFYEPMLDLDEDVLNCVMEDMHDVFYDCQPSLRLMSDDEVING FT SDFGFNIEGCCQRSSEGYPFVLSRRPGEKGKARYLEELEPSPGDAKPKYKLVEGTDVHQ FT AMLAMEAQARTEVPLLIGMDVPKDERLKPSKVLEKPKTRTFVVLPMHYNLLLRKYVGIL FT CSFMQVNRHRLSCAVGTNPYSRDWTDIYQRLAEKNSVAMNCDYSRFDGLLNYQAYVHIV FT NFINRLYNDEHTIVRGNLLMAMYGRWSICGQRVFEVRAGMPSGCALTVIINSLFNEMLI FT RYVYRVTVPRPLVNNFNQEVCLIVYGDDNLISVKPDTMKYFNGDRIKEVLAKFKVTITD FT GSDKNSPVLRAKPLKQLDFLKRGFKVQSDGRVLAPLDLQAIFSSLYYINPQGNTLNSLF FT LNAQVALRELYLHNDIEQFTAVRNFYVTQIGGNFLNLPQWRHCAAFHDEQYSQWKPWAP FT VKFLEVDVPDVKFLQHKAPSTALSIVADRLAVAGPGWRNKDPDKYLLVSLTSLKANEGG FT LYFPVDYGEGVGQQATEASIFAYRKYKDHRVRHMRDSWNEGKTIVFRCEGPFVSGWAAA FT ISFGTTVGMNAQDLLRNYDIQGGRHREYLGRYFENVRFKELKQYARPYNARLIAS" XX SQ Sequence 2958 BP; 777 A; 570 C; 717 G; 894 T; 0 other; tctacaattc catcggggag ttatgcagac gtatacaacg cgcgtaatat gactcgtgtt 60 tttaggcctc agtctgtgca gagttcaaaa ttggctgagg atcagtttaa tgagtcacat 120 gccgtaaata tgttagttag gatagatttg cctgatggca atattatttc tgcctgcagg 180 tttcgaggga agtcattggc tttgacgaaa catcaggcca tgacgattcc tcctggtgcc 240 aagctccata ttgtatatac tgataataat ggaaatacaa cggcaccaat aacacatttt 300 tttcagccca ctggtcctaa gggtgaacaa tttttgagat tcttcaatgg gacagaggtc 360 tgtatttatt ctcatcccca gctgagtgct ttgcctgggg ctccacagaa ttattttttg 420 aaagatgtgg agaaactgtc tggtgacata gccatcaagg gctgtggcat caagttgggc 480 cgcactagtg ttggagttgg tgattctgta aaggataatg aacctgtact caatcactgg 540 cgagctgtgg cccgtgtgcg caccaccatg ctgactattg acaattatgc tgaaggtggt 600 gattattgta atagcctgcc gacatctctt atctctgagt atgtaaattc accagaagat 660 tgtggtgcgc ttatagtcgc ccatcttgaa ggtggttaca aaatcattgg tatgcatgtg 720 gcaggttctt cctatccggt cgaggtagat ggagtgcgtg ttaacagata tatttctcat 780 gcttccttct tccctgacta cgcttctttt gctccatgcc aatccaattg catcaaatcc 840 ttggtgcgtg aagcaggagt agaagaaagg ggggtgtcaa aggtaggcca tattaaggat 900 cctgccgaaa cacctcatgt tggagggaaa actaaattgg aactggttga tgaggctttt 960 ttagttccat cacccgttga agttaaaatt ccctccattc tctctaaaga tgatcctcgc 1020 atccctgaaa catataaggg atatgatccg ctgggtgatg ccatggaaaa attttatgaa 1080 cccatgttgg atcttgacga ggatgttttg aattgcgtaa tggaagatat gcatgatgtt 1140 ttttatgatt gtcaaccttc cttacgcctt atgtctgatg atgaagtcat caatggcagc 1200 gactttggtt ttaatatcga aggctgttgt cagaggtctt ctgagggcta tccgttcgtt 1260 ctgagtcgac gaccgggtga gaagggcaag gcgcgttatc ttgaagaact agaacctagc 1320 ccgggtgatg caaagcccaa atataaactt gtcgagggga ctgatgtgca tcaggctatg 1380 ttggctatgg aagctcaggc tcgtactgag gttccattgc tgattggaat ggatgttccc 1440 aaagatgaga gactcaaacc gtctaaggta ttggagaagc ctaagacgcg tacttttgta 1500 gttctcccaa tgcactataa cttgcttttg cgtaaatatg tgggcatttt atgctctttt 1560 atgcaggtta ataggcatcg tctatcatgc gctgtgggca ctaacccata ttcgcgtgat 1620 tggacggaca tatatcagcg cttggctgag aagaattcag tagccatgaa ttgtgattat 1680 agcagatttg atgggctatt gaattaccaa gcatatgtac atattgtaaa ttttattaat 1740 agattgtaca atgatgaaca tactattgtg cgtggcaatc ttttgatggc tatgtacggt 1800 aggtggagca tttgcgggca acgagtcttt gaggttcgtg ctggcatgcc ttctggctgt 1860 gctctcaccg tgatcattaa ttctcttttc aatgagatgc tgatcaggta tgtttatcgc 1920 gtcaccgtac cacgccccct tgtaaataat tttaatcaag aggtgtgtct tattgtttat 1980 ggtgatgata atttaatttc agtgaagcca gacaccatga aatatttcaa tggtgatcga 2040 attaaagagg tgctggctaa atttaaagtc accatcactg atggcagtga taagaactcc 2100 ccagttctta gagctaaacc tttgaagcag ctcgattttt tgaagagagg cttcaaggtt 2160 cagagtgatg gaagggtgct tgctcctttg gatttgcaag caattttttc ttccctgtat 2220 tatattaacc cacagggaaa tactttaaat tctctttttt tgaatgctca agtggctttg 2280 cgagagttat atctccataa tgacattgag cagttcaccg ccgtaagaaa tttttatgtt 2340 acgcagatcg gcggaaattt tttgaatttg cctcagtggc gacactgtgc cgcgttccat 2400 gatgaacaat attcgcaatg gaaaccgtgg gcaccagtaa agttccttga ggttgacgtg 2460 cctgatgtga aatttttgca acataaggca ccttcaacag ccctctctat agtggcagac 2520 agacttgcag ttgctgggcc gggatggcgt aacaaagatc ccgacaagta tttgttggtc 2580 agtctcacta gcttaaaggc taatgagggc ggtctatact ttcccgtcga ttatggcgag 2640 ggagtagggc agcaagctac ggaagcatct atatttgctt accgtaaata taaagatcat 2700 cgcgtaagac atatgcgcga ttcttggaac gaagggaaaa ctatagtttt ccgatgtgaa 2760 ggacccttcg tatcaggctg ggctgctgct atctcctttg ggactaccgt aggaatgaat 2820 gcccaggatc ttttacgaaa ttatgatata cagggtggca ggcacagaga atatctgggc 2880 cgttattttg aaaatgtacg cttcaaggaa ttgaagcaat atgccagacc ctataatgct 2940 cgcttaatag cgagttag 2958 //