ID AF133431; SV 1; linear; genomic RNA; STD; VRL; 4089 BP. XX AC AF133431; XX DT 28-NOV-2000 (Rel. 66, Created) DT 08-DEC-2005 (Rel. 86, Last updated, Version 4) XX DE St Croix river virus segment 1 putative RNA-dependent RNA polymerase VP1 DE gene, complete cds. XX KW . XX OS St Croix River virus OC Viruses; Riboviria; Reoviridae; Sedoreovirinae; Orbivirus. XX RN [1] RP 1-4089 RX DOI; 10.1016/j.virol.2005.08.028. RX PUBMED; 16171838. RA Attoui H., Mohd Jaafar F., Belhouchet M., Biagini P., Cantaloube J.F., RA de Micco P., de Lamballerie X.; RT "Expansion of family Reoviridae to include nine-segmented dsRNA viruses: RT isolation and characterization of a new virus designated Aedes RT pseudoscutellaris reovirus assigned to a proposed genus (Dinovernavirus)"; RL Virology 343(2):212-223(2005). XX RN [2] RP 1-4089 RA Attoui H., Billoir F., De Micco P., De Lamballerie X.; RT ; RL Submitted (08-MAR-1999) to the INSDC. RL Virologie, Faculte de Medecine de Marseille, 27-Boulevard Jean Moulin, RL Marseille 13005, France XX DR MD5; 857238cb8a459a3470ea3edefe8f3c85. XX FH Key Location/Qualifiers FH FT source 1..4089 FT /organism="St Croix River virus" FT /segment="1" FT /mol_type="genomic RNA" FT /db_xref="taxon:104581" FT CDS 11..4048 FT /codon_start=1 FT /product="putative RNA-dependent RNA polymerase VP1" FT /db_xref="GOA:Q9DSP9" FT /db_xref="InterPro:IPR007097" FT /db_xref="InterPro:IPR008723" FT /db_xref="UniProtKB/TrEMBL:Q9DSP9" FT /protein_id="AAG34363.1" FT /translation="MAAALQRLQSARDRVATLMHGLPPFPHCARNFHIAHRFSERSAVA FT YGGPVRSVRAGGQDRIHPSFETLQESKSNETQEARIPSDSPAFSSSLRRSPGDIVFGHP FT VVVERTWEEISRDVPFNTKGKLALRIFLSSIQHPDTFQPEEEFLRHYRLIPDHPFTSFI FT RFREGRESATFGDLPLRHWFHLLTSLANERRIAPLGLSLLKELIEHLGGPPIGQDTRSL FT DHVENLTEYSGISLLVEEALTEALLEINLVDREREIGSLTLGSRKFPALQILHEHFLVC FT LPHPKHINNRLRSSYSWFVKMFSVCHPNPIVLRSHAGSDMNSKNVTYQGFSRVVNTFGP FT TLLQIKYLSHAKDLNLQAIREAVEYSNSLSDASLSLPSFTSFYTDMFTSEFNPTDEGQV FT FSLSFLLQIQTMSGYGRAWVINRSENLEEMMHPASDNYIDKVCEYTQLYVFRSYEQAFA FT NGFHPVRASEMYHSLTSLAKNTSAGMDVHFQVRKTFSRREAWRRVKSKQKSLALLHYGH FT LFFTPDELRRTYNTPDSCQTKGARDVPVKPTREVYSIVMPTIAQQYLVTNPLNRYLSYA FT ETSDSSEPFTRGTTHPSDTRVAGKVIIGALEATGSRVMDGSDVFRGTSDPSHLILALDM FT SNFDKHMTPYNFRKGEIDGMVRALSRFDGDPAFDYGDGVFPAQMAKFAYADGKIVGSLW FT NGNRRVYRARGPVPDELIDAKPKFRPPPGVFSVRSLSDVQLDEEGDVLVSVGDGSDLAT FT IYTHLSGENSTLVANSLHNMAIGRVIQDVLFQRFGDDVTFVSEMYVGDDTLAYLHFRTP FT SVSVVDEAISLVFQTVEKCGHVASPAKTTLCPLSTEKTQTHAKQGVYIPQDRMMVISSE FT RKKTIESVSAFFSSLVQKYVTKVSRGFSHDLAVDILLFTSALIGYRKLKAVIADGGTFL FT KRPLRGPTAGYSTIIVRDPICAFVPKEMGGFGLSPTAINLISTPELLVDLRRTNLHSWF FT FEHLMPCLERPFYPMWDESHPDPSLIQIDVQARAFSKYVRATPATFLSQPNLRKAIDML FT PLQRMGPYDLMHNMTKQAVLKDQSARSLLAPAYERDVFIGNLISLSPPRELLLSDSDGA FT IHTLISLLYDILLTPLPPQRHYYPDITLSPIFKLQREAFGVRSSAAVQVSFMDKIDRIL FT SRDSVMRGLITSEHILAIIQQLGLALPQDQYLFIFLLLNLDENVASSLASLVVDGKLRF FT DHTLIARGGICGDEFSMSLDVLTHSFQQSSFSCSRMLTSGEQSCLLLAASQTSMLRATL FT GLPRAHLDYQVHTGPQSRIFKALRVQLTEHMNRRRNRYAKKFFHDPEVRRTLAERSASL FT RF" XX SQ Sequence 4089 BP; 926 A; 1148 C; 932 G; 1083 T; 0 other; gtaatgatcc atggctgccg ctctgcaacg gctgcagtca gcaagggatc gggtcgccac 60 gcttatgcat ggcctcccac cgttcccgca ctgtgcgagg aacttccaca tcgcgcacag 120 attctctgag cgttccgctg ttgcgtacgg cggacccgtg agatctgttc gcgcgggtgg 180 acaggatcga attcatcctt ccttcgaaac acttcaagag tccaagtcaa atgagactca 240 agaagcgcga attccttcgg attctcctgc cttctcctct tcgcttcggc gttcacctgg 300 agacatcgtc ttcggacacc ctgtcgttgt cgaacggacg tgggaggaga tctctcgaga 360 tgtgcctttt aacacaaaag gtaagctcgc ccttcgtata ttcctctctt ctattcaaca 420 ccctgataca ttccagcctg aggaggagtt cctccgacat tatcggctta ttccagatca 480 ccctttcaca tcgtttatac gcttccgaga gggaagggaa agcgccactt tcggggacct 540 acccctcagg cattggtttc acctcctcac ttctttagca aatgaaagac gcatagcacc 600 actaggtctt tcactgctta aagaactaat cgaacatctg ggtggtccac ccatcggtca 660 agatacacgt tctcttgatc acgtcgagaa tctcacggaa tactcaggta tctcgctact 720 cgtcgaagaa gcgttgactg aggccctcct ggagataaac ctcgtcgata gagaaaggga 780 gattggctct cttacgttgg gaagcagaaa gtttcccgcg ctgcaaattc tacacgaaca 840 ctttctcgtc tgccttccac atccgaaaca tattaacaac agactcaggt cttcctattc 900 gtggttcgtg aaaatgttta gcgtctgtca tcccaacccc atcgttctgc gctcgcacgc 960 tggatcggac atgaattcga agaatgttac ttaccaaggg ttctcacggg tcgtcaacac 1020 gtttggaccc acgttgcttc agataaagta tctatctcat gcgaaggacc tcaacctcca 1080 ggcgattcgg gaggcggtcg aatattcaaa ctcactttcg gacgcttcac tttccctgcc 1140 ttcgttcacc tccttctata ctgacatgtt tacttctgag tttaacccga cggacgaggg 1200 acaggttttc tcgttatcct tccttttgca aattcagacg atgagtggct atggacgagc 1260 atgggtcatc aaccgttctg agaatctgga agaaatgatg catccagcct cagataacta 1320 cattgacaaa gtctgtgaat atacgcagct ctatgtcttt cgttcctatg aacaggcctt 1380 tgcgaatgga tttcacccgg tgcgcgcttc cgagatgtat cattccttga cctctctggc 1440 aaagaacacc tctgctggga tggatgtaca tttccaggtt cggaagacgt tttccagaag 1500 agaggcgtgg cgtcgcgtta aatctaagca gaagagtctt gcgctgttac actatggtca 1560 tctcttcttt actccagacg aactacgacg tacgtacaat acgccggatt cgtgccaaac 1620 gaaaggtgcg cgggatgtac ctgttaagcc cacgcgtgag gtatattcta ttgttatgcc 1680 tactatagct cagcagtacc tggtcacgaa tcccttgaat aggtacctat cttacgcgga 1740 aacttccgac tcttctgaac ccttcacacg aggtaccacc cacccgagtg atacgcgtgt 1800 ggcgggaaag gtcatcatcg gcgcgctcga agctacgggc tctcgcgtca tggatggatc 1860 ggatgtgttt cgtggcacct ccgacccttc tcatctcata ctggctctcg acatgtcaaa 1920 ctttgacaag cacatgacac cttacaactt tagaaagggt gagatcgacg gcatggtccg 1980 agccctatct cgctttgatg gagaccccgc ctttgactat ggcgatggcg ttttcccggc 2040 ccagatggct aagttcgcgt acgccgatgg caagattgtt ggatcgttat ggaacgggaa 2100 ccgtcgcgtg tacagggcca gaggccccgt accggatgag ctcattgacg cgaagcctaa 2160 atttcgtccg cctcctggag tcttttctgt tcgttccctc tccgatgttc agcttgacga 2220 ggaaggggac gttctagtct cggttggcga tggcagtgac ctcgccacca tctataccca 2280 tctctcaggc gagaattcta ctctcgtcgc aaactctcta cataacatgg ccattggccg 2340 cgttattcag gacgttcttt tccagaggtt cggtgacgac gtcacctttg tctctgagat 2400 gtacgtcgga gatgatactc tggcctatct acactttcgc actccatcgg tcagcgtggt 2460 cgatgaggct attagtctcg tcttccagac ggttgaaaaa tgtgggcacg ttgcttctcc 2520 ggcgaaaacg acattgtgtc cactttccac cgaaaagaca cagactcacg ccaagcaagg 2580 agtgtacatt ccccaggatc gaatgatggt tatatcttct gagagaaaga aaaccatcga 2640 gtcggtgtca gcctttttct cctctctcgt tcagaaatac gttactaagg tctctagagg 2700 tttctctcat gacctagctg tcgacatctt acttttcacc tccgcgctca tcggatatcg 2760 gaagctcaag gcggtaatcg ctgatggggg caccttcttg aaacgcccgt tgcgaggacc 2820 taccgcaggg tactctacca tcattgtcag agaccctatc tgtgctttcg ttcctaaaga 2880 gatgggcggc tttggattat cgcccaccgc cattaaccta atctctactc cggagcttct 2940 cgttgatctt cgtagaacca acctgcactc atggttcttc gagcacctca tgccatgtct 3000 ggagagacct ttctatccaa tgtgggacga gagtcacccc gacccttccc tcatacaaat 3060 agacgttcaa gcccgcgctt tctcgaaata tgtacgagct actccagcaa cttttctctc 3120 tcagcccaac ctgaggaaag ccattgacat gttgcctctg cagcgaatgg ggccgtatga 3180 tctaatgcac aacatgacta aacaagcggt cctcaaagat cagagtgcgc gctcccttct 3240 cgcacctgcg tatgagagag atgtattcat cggaaatctt atctctctct ctcccccgcg 3300 agaattactg ctatcagata gcgacggagc gattcacact ctgatctctc ttctctatga 3360 cattttgctc acccctctgc ctccccaacg tcactactat cctgacatca ccctttcgcc 3420 catcttcaaa ctgcaacgtg aggctttcgg ggtgcggtcc tccgcagccg tgcaagtgtc 3480 ctttatggac aaaatcgatc gcattctttc gagagatagt gtgatgaggg gacttatcac 3540 ctcggaacac attctcgcta ttattcagca acttggcctc gcgctccccc aggatcaata 3600 tctcttcatc ttcttgctcc tcaacctgga cgaaaatgtt gcatcttccc tcgcctcttt 3660 ggtagttgat ggcaaactga gatttgacca tactctcatc gcacgaggcg gtatatgtgg 3720 agacgagttc tccatgtctc tcgacgttct cacacattct tttcagcaga gttccttcag 3780 ttgctctcga atgctcactt ccggggaaca gagttgttta cttctcgcag catctcagac 3840 gtccatgctg cgagcgacgc tcggtttgcc ccgtgcgcat cttgactacc aagtacatac 3900 tgggcctcag tcaagaatct ttaaagcgct gcgtgtgcag ctaacagaac acatgaacag 3960 acgccgaaat cgatacgcaa aaaagttctt ccatgatcct gaagttcgtc gcacactagc 4020 ggagcgtagt gcgagccttc ggttttaggc ccgatacctc cgttctgacc gtggctggga 4080 tttacctac 4089 //