ID   AF127976; SV 1; linear; genomic RNA; STD; VRL; 2198 BP.
XX
AC   AF127976;
XX
DT   22-JUL-1999 (Rel. 60, Created)
DT   03-MAR-2000 (Rel. 62, Last updated, Version 2)
XX
DE   Cucumber mosaic virus strain LS 3a protein and coat protein genes, complete
DE   cds.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2198
RX   PUBMED; 10400773.
RA   Roossinck M.J., Zhang L., Hellwald K.H.;
RT   "Rearrangements in the 5' nontranslated region and phylogenetic analyses of
RT   cucumber mosaic virus RNA 3 indicate radial evolution of three subgroups";
RL   J. Virol. 73(8):6752-6758(1999).
XX
RN   [2]
RP   1-2198
RA   Roossinck M.J., Zhang L., Hellwald H.K.;
RT   ;
RL   Submitted (12-FEB-1999) to the INSDC.
RL   Plant Biology Divsion, The Samuel Roberts Noble Foundation, P.O. Box 2180,
RL   Ardmore, OK 73402, USA
XX
DR   MD5; 0cc7c33775f4770203041f2ea630f6df.
DR   EuropePMC; PMC112760; 10400773.
DR   EuropePMC; PMC136033; 11884564.
DR   EuropePMC; PMC3550734; 23637513.
DR   EuropePMC; PMC416521; 15163757.
DR   EuropePMC; PMC4223077; 25375140.
DR   EuropePMC; PMC4908998; 27366772.
DR   RFAM; RF01084; TLS-PK3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2198
FT                   /organism="Cucumber mosaic virus"
FT                   /strain="LS"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12305"
FT   CDS             97..936
FT                   /codon_start=1
FT                   /product="3a protein"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:Q9WAB6"
FT                   /protein_id="AAD45246.1"
FT                   /translation="MAFQGPSRTLTQQSSAASSDDLQKILFSPDAIKKMATECDLGRHH
FT                   WMRADNAISVRPLVPQLTSNNLLSFFKSGYDAGELRSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLKIYLADLGDKELSPIDGQCVTLHNHELPALISFQPTYDCPMELVGNRHRCFAVVVE
FT                   RHGYIGYGGTTASVCSNWQAQFSSKNNNYTHAAAGKTLVLPYNRLAEHSKPSAVARLLK
FT                   SQLNNVSSSRYLLPNVALNQNASGHESEILKESPPIAIGSPSASRNNSFRSQVVNGL"
FT   CDS             1221..1877
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q9WAB5"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:Q9WAB5"
FT                   /protein_id="AAD45247.1"
FT                   /translation="MDKSGSPNASRTSRRRRPRRGSRSASGADAGLRALTQQMLKLNRT
FT                   LAIGRPTLNHPTFVGSESCKPGYTFTSITLKPPEIEKGSYFGRRLSLPDSVTDYDKKLV
FT                   SRIQIRINPLPKFDSTVWVTVRKVPSSSDLSVAAISAMFGDGNSPVLVYQYAASGVQAN
FT                   NKLLYDLSEMRADIGDMRKYAVLVYSKDDKLEKDEIVLHVDVEHQRIPISRMLPT"
XX
SQ   Sequence 2198 BP; 496 A; 519 C; 522 G; 661 T; 0 other;
     gtaatcttac cactttcttt tcacgtcgtg tcgcgtcagt ccacgctgtg tgtgtgtgtg        60
     tgttagttag tgtgtcgtgt ctagattacg aaggttatgg ctttccaagg tcccagtagg       120
     acgttaactc aacagtcctc ggcggcgtcg tctgacgact tacagaagat attattcagc       180
     cccgatgcca tcaagaagat ggctactgag tgtgacctag gtcgacatca ttggatgcgc       240
     gcggataacg ccatctctgt cagacctctc gttccccaat taaccagtaa caatttattg       300
     tctttcttta aatctgggta tgatgccggt gaattgcgct ctaaaggcta tatgagcgtt       360
     cctcaagtgc tgtgtgccgt taccaggacg gtttctacgg atgctgaggg ttctttgaaa       420
     atttatttgg ctgacctagg tgataaagaa ttatccccaa ttgatgggca atgtgttact       480
     ttacataatc atgagctccc tgctttgata tctttccaac ctacctacga ttgccccatg       540
     gaattagttg gtaatcggca tcgatgtttc gcggtagtcg ttgagagaca tggttatatt       600
     ggttacggtg gtaccactgc tagcgtgtgt agtaactggc aagctcagtt ttcttcaaag       660
     aataataatt acacacacgc cgctgctggt aagactcttg tgttgcctta caacagatta       720
     gccgagcatt cgaaaccgtc agccgtcgct cgcctgttga agtcgcagtt aaacaacgtt       780
     agctcatcgc gttatctttt accgaacgtt gctcttaatc aaaatgcgtc tgggcacgag       840
     tccgagattt taaaggaaag ccctcccatc gctataggga gtccgtccgc gtcccgtaac       900
     aatagcttca gatcgcaggt ggttaacggt ctttagtgtt ttgttacgtt gtacctatgt       960
     atatatatac tacgtttatc ttccgtatgt aaatacatgt gagtctagag tcccgtgtga      1020
     gttgtaacgg tagacatctg tgacgcgatg ccgcttgaag atttcccatc tggggttagt      1080
     aagtccacat cacagtttta aggttcaatt ccttttgctc cctgttgggc cccttacttt      1140
     ctcatggatg cttctccgcg agttagcgtt tagttgttca cctgagtcgt gttttctttg      1200
     ttttgcgtct cagtgtgcct atggacaaat ctggatctcc caatgctagt agaacctccc      1260
     ggcgtcgtcg cccgcgtaga ggttctcggt ccgcttctgg tgcggatgca gggttgcgtg      1320
     ctttgactca gcagatgctg aaactcaata gaaccctcgc cattggtcgt cccactctta      1380
     accacccaac cttcgtgggt agtgaaagct gtaaacccgg ttacactttc acatctatta      1440
     ccctgaaacc gcctgaaatt gagaaaggtt catattttgg tagaaggttg tctttgccag      1500
     attcagtcac ggactatgat aagaagcttg tttcgcgcat tcaaatcagg attaatcctt      1560
     tgccgaaatt tgattctacc gtgtgggtta cagttcggaa agtaccttca tcatccgatc      1620
     tttccgtcgc cgccatctct gctatgtttg gcgatggtaa ctcaccggtt ttggtttatc      1680
     agtatgctgc gtccggagtt caggccaaca ataagttact ttatgacctg tccgagatgc      1740
     gtgctgatat cggcgacatg cgtaagtacg ccgtcctggt ttactcgaaa gacgataaac      1800
     tagagaagga cgagattgta cttcatgtcg acgtcgagca tcaacgaatt cctatctcac      1860
     ggatgctccc gacttagtcc gtgtgtttac cggcgtccga agacgttaaa ctacactctc      1920
     aatcgcgagt gctgagttgg tagtgctgct ccaaactgcc tgaagtccct aaacgtgttg      1980
     ttgcgcgggg aacgggttgt ccatccagct tacggctaaa atggtcagtc gtgtctttca      2040
     cacgccgatg tcttacaaga tgtcgaggta cccttgaaat cacctcctag atttcttcgg      2100
     aagggcttcg tgagaagctc gtgcacggta atacactgat attaccaaga gtgcgggtat      2160
     cgcctgtggt tttccacagg ttctccataa ggagacca                              2198
//