ID   AF127770; SV 1; linear; genomic RNA; STD; VRL; 1833 BP.
XX
AC   AF127770;
XX
DT   17-NOV-2001 (Rel. 69, Created)
DT   17-NOV-2001 (Rel. 69, Last updated, Version 1)
XX
DE   Pea seed-borne mosaic virus strain S6 polyprotein gene, P1-Pro to HC-Pro
DE   region, partial cds.
XX
KW   .
XX
OS   Pea seed-borne mosaic virus
OC   Viruses; ssRNA viruses; ssRNA positive-strand viruses, no DNA stage;
OC   Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1833
RX   DOI; 10.1007/s007050170038.
RX   PUBMED; 11722010.
RA   Ali A., Randles J.W.;
RT   "Genomic heterogeneity in Pea seed-borne mosaic virus isolates from
RT   Pakistan, the centre of diversity of the host species, Pisum sativum";
RL   Arch. Virol. 146(10):1855-1870(2001).
XX
RN   [2]
RP   1-1833
RA   Ali A.;
RT   ;
RL   Submitted (12-FEB-1999) to the INSDC.
RL   Applied and Molecular Ecology, University of Adelaide, Waite Campus, Glen
RL   Osmond, SA 5064, Australia
XX
DR   MD5; f89a9d2710f545f0dc30222260c2a387.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1833
FT                   /organism="Pea seed-borne mosaic virus"
FT                   /strain="S6"
FT                   /mol_type="genomic RNA"
FT                   /country="Australia: South"
FT                   /db_xref="taxon:12208"
FT   CDS             <1..>1833
FT                   /codon_start=2
FT                   /product="polyprotein"
FT                   /note="contains partial P1-Pro and full HC-Pro"
FT                   /db_xref="GOA:Q8VBR8"
FT                   /db_xref="InterPro:IPR001456"
FT                   /db_xref="InterPro:IPR002540"
FT                   /db_xref="InterPro:IPR031159"
FT                   /db_xref="UniProtKB/TrEMBL:Q8VBR8"
FT                   /protein_id="AAL32129.1"
FT                   /translation="PRNIKMKAESIDALIDQVVTCAGKHAKQVFLIDKQKANKVWIKRV
FT                   NDIRLLQVETKHHRGKISQRDVLLNDLTKRVARYFASKTTHVHPSSSITHGHSGVVFLR
FT                   ENIDGNKSYSSDDLFVVRGKRNGKLMEGRNKVAWHKMFQINHFSSVGLKIWNAFDAEYV
FT                   KLRDESTSDHECVGGITPEECGIIAAHILRVFYPCWRITCTKCISTWLSKPTSEQIEHI
FT                   YVRGHLAIQDLNWKIPAAHHVAHMIELLRQRIKNTTFNMENNTKVHELIGHRQDGVFRH
FT                   LNRLNNCVLAAHGSNTIEWESMNESLLELARWHNRRTESIAGGGISSFRNKVSAKAQIN
FT                   FALMCDNQLDTNGNFVWGERGYHAKRFFSEYFTKIDPKDGYTHHAVRTTPTGVRHLAVG
FT                   NLIIPGDLQKLREKLEGVSITTVDISEKCVSRRNGDFVYPCSCVTLENGKPAMSDVILP
FT                   TRNHLVIGNTGDPKLVDLPKTEAGGMWIAKEGYCYINIFFAMLVNVSEKDAKDFTKFVR
FT                   DEIMPQLGKWPTMMDVATACYKLAIIYPDVRDAQLPRILVDHSEQTFHVIDSYGSMTTG
FT                   YHILKAGTVSQLISFAHGALVGEMKMYRVGGTQK"
XX
SQ   Sequence 1833 BP; 596 A; 324 C; 442 G; 471 T; 0 other;
     accacgaaat ataaagatga aagctgagtc catcgacgct ttaattgacc aggttgtgac        60
     ttgcgcgggg aagcatgcta aacaagtttt tctaattgac aagcaaaagg caaacaaagt       120
     ctggataaag cgagtcaatg atattcgctt gttgcaagtc gagacaaaac accacagagg       180
     gaaaattagt caaagggatg ttttgctgaa tgatctcact aagagggttg ctagatattt       240
     cgcgagcaaa acaacacatg ttcacccgtc aagcagcatc acacatggac acagcggcgt       300
     agtctttttg cgtgagaata tagatggcaa caagtcatac agcagtgatg atttgtttgt       360
     tgttagagga aaaagaaatg gaaaattgat ggaaggtcgt aataaggtag catggcacaa       420
     gatgttccag ataaaccact tttctagtgt cggacttaaa atctggaatg cgtttgacgc       480
     agaatatgtg aaattgagag atgagtcaac tagtgaccac gagtgtgttg gcgggatcac       540
     accagaagaa tgtggaatta ttgccgcgca catactacga gttttctatc cgtgttggcg       600
     cataacttgc acaaaatgca tttcaacttg gttgagtaag ccaacaagtg agcaaattga       660
     acacatatat gttcgaggac atttggcaat acaggatttg aattggaaaa ttccagcagc       720
     gcatcatgtg gctcatatga ttgagctatt gcggcaaagg attaaaaaca caacattcaa       780
     catggaaaac aacacaaaag tccatgaatt aattggtcac cggcaagatg gcgttttcag       840
     acacttaaat cggctcaata attgcgtttt ggcggcgcat ggttctaaca caatcgaatg       900
     ggagagcatg aatgagagtt tgctagaact agcacgctgg cacaatagga ggaccgagtc       960
     aattgcaggt ggcggcatct caagtttccg taacaaggtt tctgccaaag ctcaaattaa      1020
     tttcgcgttg atgtgcgaca atcagttgga tacgaacgga aatttcgtgt ggggcgaacg      1080
     tggatatcat gcgaaacgtt tcttttcaga gtattttaca aagattgatc caaaagatgg      1140
     gtacactcac catgctgtta gaacaacacc gacaggagtt aggcatctgg cagtaggaaa      1200
     cttgatcata ccaggcgatc tccaaaaact tagggaaaaa cttgaaggtg tgtcaatcac      1260
     aacagtggac atctcagaaa agtgcgtcag taggcggaat ggagattttg tttatccttg      1320
     ctcatgtgta acacttgaaa atggaaaacc agccatgtct gacgtaattt taccgacgag      1380
     aaatcatttg gtgattggaa acacaggcga tccaaagttg gttgatttac ctaagactga      1440
     agctggtgga atgtggatcg ctaaagaagg atattgttac atcaacatat tctttgcaat      1500
     gcttgtaaac gttagtgaga aggatgctaa ggacttcaca aaatttgtaa gggatgaaat      1560
     catgccacaa cttgggaaat ggccaactat gatggatgta gcaactgcat gttataaatt      1620
     agcaataatt tatcctgacg tgcgtgatgc acagctaccg agaatactag ttgatcactc      1680
     agagcaaact tttcatgtaa tagattcata tggctccatg actacaggat atcacatctt      1740
     gaaagcaggg acagtttccc agttgataag ctttgcgcat ggtgctttgg tgggtgagat      1800
     gaagatgtat agagttggag gcactcagaa aat                                   1833
//