ID   AF116191; SV 1; linear; mRNA; STD; VRL; 1542 BP.
XX
AC   AF116191;
XX
DT   02-JAN-2000 (Rel. 62, Created)
DT   24-NOV-2000 (Rel. 65, Last updated, Version 3)
XX
DE   Raspberry ringspot virus strain Tarvit putative coat protein mRNA, partial
DE   cds.
XX
KW   .
XX
OS   Raspberry ringspot virus
OC   Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus.
XX
RN   [1]
RP   1-1542
RX   DOI; 10.1016/S0168-1702(00)00158-1.
RX   PUBMED; 10958983.
RA   Scott S.W., Zimmerman M.T., Jones A.T., Le Gall O.;
RT   "Differences between the coat protein amino acid sequences of English and
RT   Scottish serotypes of Raspberry ringspot virus exposed on the surface of
RT   virus particles";
RL   Virus Res. 68(2):119-126(2000).
XX
RN   [2]
RP   1-1542
RA   Scott S.W., Zimmerman M.T., Jones A.T., Le Gall O.;
RT   ;
RL   Submitted (23-DEC-1998) to the INSDC.
RL   Plant Pathology and Physiology, Clemson University, P.O. Box 340377, 120
RL   Long Hall, Clemson, SC 29634-0377, USA
XX
DR   MD5; ce13072c22431b9b5a6524ebd0ad3896.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1542
FT                   /organism="Raspberry ringspot virus"
FT                   /strain="Tarvit"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:12809"
FT   CDS             <1..>1542
FT                   /codon_start=1
FT                   /product="putative coat protein"
FT                   /note="CP"
FT                   /db_xref="GOA:Q9QAG8"
FT                   /db_xref="InterPro:IPR005054"
FT                   /db_xref="InterPro:IPR005305"
FT                   /db_xref="InterPro:IPR005306"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:Q9QAG8"
FT                   /protein_id="AAF21986.1"
FT                   /translation="AYEVDPLHLLYYEEVTVPKDTLDGTLLARIDVRAKAATFDSAVWR
FT                   QWVRDGCLKPRVKMRVTAATSCYSGIVLGACLDAYRRIPATTKTDFTASLVTGLPNTMW
FT                   AMRDTSEIEWDIDLAAVCGHTFFALGDTFGYMDFLVYVLRGNEITAVADWSIYVSFHVD
FT                   WTQESMLATLIPTFVWPPKPTDISLLKEVWGPYRFTLDGTEAKGSFAIMPGTAIPHGQQ
FT                   IVRTFPRVVAAHFRSWTGKVRMSIQEVSSIFLTGTYMVGVSWNATADLADIVTRKHWIV
FT                   KSNEIFEVDLYCPYGENPTFTGQANGKPFIIVHKLGGIVGPKDSVGTFGFMIHIHGLTG
FT                   VYRNPTLHSGDRSVGSAWFRINNIADDNLVFNIPGKIENIIAAAGNYDVTNYVNPTILL
FT                   FSVTGLHGGIIRLHITWCPNTNLGESKGTLKYMQYLYHTATDNFFGDQATRGIIDQDGF
FT                   TVDIACGDFFGATRVGLPGEVERLGIYSSNAKSIAEIRVSFEVLSMNFYGSTIKVT"
XX
SQ   Sequence 1542 BP; 377 A; 328 C; 381 G; 456 T; 0 other;
     gcctatgagg tagacccact acatttgttg tattatgagg aagtcactgt tccgaaggat        60
     acccttgatg gtactttact ggcccggata gatgttcgag ctaaggctgc aacttttgat       120
     agtgctgtat ggcgacaatg ggtaagagat ggttgtctca aacccagagt taaaatgcgt       180
     gttactgcag ctacctcgtg ttattccggt atcgtgctgg gcgcatgcct cgatgcttat       240
     cgcagaattc ctgcaactac gaagacggat ttcaccgcct cccttgtaac aggactgcct       300
     aatactatgt gggcaatgcg cgatacttca gagatcgaat gggatatcga tctcgcagca       360
     gtgtgcggac acactttttt tgcacttgga gacacctttg ggtacatgga ctttttagtt       420
     tatgtgctca ggggcaatga aatcactgct gttgccgatt ggtcaatata tgtttccttt       480
     catgttgatt ggacacagga aagtatgttg gccacactta tccctacttt tgtatggccc       540
     ccgaaaccga ctgatatatc tcttcttaag gaagtatggg ggccataccg ttttacgctg       600
     gatggtaccg aggctaaagg aagttttgct ataatgcccg gtacagctat tccccatggg       660
     cagcagattg tgcgcacatt tccccgagtc gttgccgcac acttccgatc atggactggg       720
     aaggtcagga tgtccattca agaagtttcc tctattttcc tgaccggaac atatatggtt       780
     ggtgtgtcct ggaatgctac tgcggatctt gccgacattg tcactcggaa acattggatt       840
     gtaaagtcca atgagatttt tgaggtggac ctatattgtc catacggtga gaatcccacc       900
     tttacgggtc aggccaacgg aaagccgttc attatagtgc acaaacttgg cggaatcgtt       960
     gggcccaagg actcagttgg gacgtttggt ttcatgatac acatacatgg cttgactggc      1020
     gtgtatagga acccaacgtt acacagtggt gatcgctctg tggggagtgc ctggttccgc      1080
     atcaataaca ttgccgatga taatctggtg tttaacatac caggtaaaat cgaaaatatc      1140
     attgcggctg ctgggaatta tgatgtcaca aattatgtca atcctactat cttactgttt      1200
     tcagttactg gattgcatgg tggtattata cgtctccata ttacgtggtg cccaaatacc      1260
     aatcttggtg agtctaaggg tactttgaag tatatgcaat atctgtacca tacggccact      1320
     gacaatttct ttggcgacca agcaacacgt gggatcatcg accaggatgg tttcacagtt      1380
     gatattgctt gtggtgactt ctttggcgct acgagagttg gcttgcccgg ggaagttgaa      1440
     agacttggca tttacagttc aaatgccaag tccattgctg aaattagggt ttcttttgaa      1500
     gtgctatcca tgaatttcta cggtagcact atcaaagtga cg                         1542
//