Dbfetch

Dbfetch

ID   AF113796; SV 1; linear; genomic DNA; STD; VRL; 618 BP.
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AC   AF113796;
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DT   28-JUN-2000 (Rel. 64, Created)
DT   29-SEP-2000 (Rel. 65, Last updated, Version 2)
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DE   Rice tungro spherical virus clone I01cp1n coat protein 1 (CP1) gene,
DE   partial cds.
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KW   .
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OS   Rice tungro spherical virus
OC   Viruses; Riboviria; Picornavirales; Secoviridae; Waikavirus.
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RN   [1]
RP   1-618
RX   DOI; 10.1007/s007050070118.
RX   PUBMED; 10948991.
RA   Azzam O., Yambao M.L.M., Muhsin M., McNally K.L., Umadhay K.M.L.;
RT   "Genetic diversity of rice tungro spherical virus in tungro-endemic
RT   provinces of the Philippines and Indonesia";
RL   Arch. Virol. 145(6):1183-1197(2000).
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RN   [2]
RP   1-618
RA   Azzam O.I., Yambao M.L.M., Muhsin M., McNally K.L., Umadhay K.M.L.;
RT   ;
RL   Submitted (16-DEC-1998) to the INSDC.
RL   Entomology and Plant Pathology, International Rice Research Institute, P.O.
RL   Box 933, Manila, Luzon 1099, Philippines
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DR   MD5; d18d4bf64c36e65efdfef7e813210a1a.
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FH   Key             Location/Qualifiers
FH
FT   source          1..618
FT                   /organism="Rice tungro spherical virus"
FT                   /mol_type="genomic DNA"
FT                   /country="Indonesia: Bali"
FT                   /clone="I01cp1n"
FT                   /note="P. Galak A"
FT                   /db_xref="taxon:35287"
FT   CDS             <1..>618
FT                   /codon_start=1
FT                   /gene="CP1"
FT                   /product="coat protein 1"
FT                   /db_xref="GOA:Q9INS7"
FT                   /db_xref="InterPro:IPR024379"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:Q9INS7"
FT                   /protein_id="AAF76488.1"
FT                   /translation="ETFIVGGHEELEPHQDSSVAAAGPADEHNAMLQKIYLGSFKWKVS
FT                   DGGGSFLKTFSLPSDIWAANDRMKNFLSYFQYYTCEGMTFTLTITSIGLHGGTLLVXWD
FT                   ALSSATRRGIVSMIQLSNLPSMTLHASGSSIGTLTVTSPAIQHQICTSGSEGSIANLGS
FT                   LVISVANVLCADSASAQELNVNAWVQFDKPKLSYWTAQHSIAQ"
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SQ   Sequence 618 BP; 154 A; 137 C; 157 G; 169 T; 1 other;
     gaaacgttta ttgtgggagg tcatgaagag ctagagcccc atcaggatag tagtgttgca        60
     gcagctggac ccgctgatga acataatgcc atgctgcaga agatttacct tggctctttt       120
     aaatggaagg tgtccgatgg ggggggttca tttctcaaaa ccttttccct tccgtctgat       180
     atatgggctg ctaacgatag gatgaagaat ttcctcagct atttccagta ttatacttgt       240
     gagggaatga catttacgct cacaatcacc agtattgggt tgcatggagg cacgctgctt       300
     gtakcctggg atgccttgag tagtgccaca cgaagaggga tcgtttcaat gatacagctg       360
     agtaacctcc cctcaatgac gttgcatgcg agtgggagtt ctattggcac gcttactgtg       420
     acctctcctg cgattcaaca ccagatttgc acatcaggaa gtgaaggctc tatagctaac       480
     ttgggctcgc ttgtgatttc agtagcaaat gtgctgtgtg ccgactccgc atcggcccag       540
     gaacttaatg tcaatgcttg ggtacagttc gacaagccca agcttagtta ttggacagca       600
     caacattcaa ttgcacag                                                     618
//