ID AF112354; SV 1; circular; genomic DNA; STD; VRL; 2802 BP. XX AC AF112354; XX DT 30-JUN-1999 (Rel. 60, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 5) XX DE East African cassava mosaic Cameroon virus component A, complete sequence. XX KW . XX OS East African cassava mosaic Cameroon virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2802 RX PUBMED; 10640569. RA Fondong V.N., Pita J.S., Rey M.E., de Kochko A., Beachy R.N., Fauquet C.M.; RT "Evidence of synergism between African cassava mosaic virus and a new RT double-recombinant geminivirus infecting cassava in Cameroon"; RL J. Gen. Virol. 81(Pt 1):287-297(2000). XX RN [2] RP 1-2802 RA Fondong V., Kochko de A., Beachy R.N., Fauquet C.; RT ; RL Submitted (10-DEC-1998) to the INSDC. RL Cell Biology, ILTAB/IRD/TSRI, 10550 N. Torrey Pines Rd., San Diego, CA RL 92037, USA XX DR MD5; 3a7874342cf381d3c0033aab3407a5c4. DR EuropePMC; PMC1079959; 15784145. DR EuropePMC; PMC4810563; 26865712. XX FH Key Location/Qualifiers FH FT source 1..2802 FT /organism="East African cassava mosaic Cameroon virus" FT /segment="component A" FT /strain="WACMV/CM" FT /mol_type="genomic DNA" FT /db_xref="taxon:223262" FT gene 236..529 FT /gene="AV2" FT CDS 236..529 FT /codon_start=1 FT /gene="AV2" FT /product="precoat protein" FT /db_xref="GOA:Q9WR13" FT /db_xref="InterPro:IPR002511" FT /db_xref="InterPro:IPR005159" FT /db_xref="UniProtKB/TrEMBL:Q9WR13" FT /protein_id="AAD40944.1" FT /translation="MLAVKYLLHLEQEYDRGTVGAEYIRDLIGVLRCKSYGEATRRYNN FT LNTRIQGAEEAELRQPIHEPCGCPYCPRHQKQNMGQQAHVSEAQDVQDVSKP" FT gene 342..1115 FT /gene="AV1" FT CDS 342..1115 FT /codon_start=1 FT /gene="AV1" FT /product="coat protein" FT /note="CP" FT /db_xref="GOA:Q9WR12" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="UniProtKB/TrEMBL:Q9WR12" FT /protein_id="AAD40945.1" FT /translation="MAKRPGDIIISTPVSKVRRRLNFDSPYTNRVVAPTVRVTRSKIWA FT NRPMYRKPKMYRMYRSPDVPKGCEGPCKVQSYEQRDDVKHTGIVRCVSEVTRGSGITHR FT VGKRLCVKSIYILGKIWMDENIKKQNHTNHVMFFLVRDRRPYGPSPQDFGQVFNMFDNE FT PTTATVKNDYRDRFQVLRKFHATVVGGPSGMKEQALVKRFFRINNHIVYNHQEQAKYEN FT HTENALLLYMACTHASNPVYATLKIRIYFYDAVTN" FT gene complement(1112..1516) FT /gene="AC3" FT CDS complement(1112..1516) FT /codon_start=1 FT /gene="AC3" FT /product="replicational enhancer protein" FT /note="REn" FT /db_xref="GOA:Q9WR11" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:Q9WR11" FT /protein_id="AAD40948.1" FT /translation="MDLRTGEDIGALQWRSGAFIWEIPNPLYFTILNHDSMPFNMTHDI FT IDVQIRFNYNLRQALGMHKCFLNFRIWTRLHPQTWRFFRTFRTQVMKYLTNLGVISIST FT VIDAVHHVLNVVFVGTLSVSQDHAIKFNIY" FT gene complement(1257..1664) FT /gene="AC2" FT CDS complement(1257..1664) FT /codon_start=1 FT /gene="AC2" FT /product="transcriptional activator" FT /note="TRAP" FT /db_xref="GOA:Q9WR10" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:Q9WR10" FT /protein_id="AAD40947.1" FT /translation="MRSSSPSQSHSSPPPIKARHRQAKLRAPRRRRIDLTCGCSIYRSI FT NCHNHGFTHRGRHWCSSMEEWRLYLGDSKSPIFHNPQPRQHAVQHDSRHNRCPDSVQLQ FT PEASTGDAQVFSQLPDLDSFTSSDLAFLQNL" FT gene complement(1594..2652) FT /gene="AC1" FT CDS complement(1594..2652) FT /codon_start=1 FT /gene="AC1" FT /product="replicase" FT /note="DNA polymerase" FT /db_xref="GOA:Q9WR09" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:Q9WR09" FT /protein_id="AAD40946.1" FT /translation="MPRAGRFQINAKNYFITYPRCSLAKEEALSQLKAISYPTNIKFIR FT VCRELHQDGVPHLHVLIQFEGKFQCTNPRFFDLISPSRSTHFHPNIQGAKSSSDVKAYI FT EKGGEFLDDGIFQVDARSARGEGQHLAQVYAEALNASSKSEALQIIKEKDPKSFFLQFH FT NISANADRIFQAPPQTYVSPFLSSSFTQVPEEIEVWVSENICRPAARPWRPISIVLEGD FT SRTGKTMWARSLGPHNYLCGHLDLSPKIYSNDAWYNVIDDVDPHYLKHFKEFMGAQRDW FT QSNTKYGKPIQIKGGIPTIFLCNPGPNSSYKEYLDEDKNSNLKNWAIKNALFISLTEPL FT FSSTDQSQAQAS" FT gene complement(2519..2797) FT /gene="AC4" FT CDS complement(2519..2797) FT /codon_start=1 FT /gene="AC4" FT /product="transcriptional regulator AC4" FT /db_xref="UniProtKB/TrEMBL:Q9WR08" FT /protein_id="AAD40949.1" FT /translation="MAANIRNSNFEWKSTYLHICHWGTSYILPPIPPFPWSFECPPIQN FT DSQYAESRSFSNKCQKLFHNLSPMLLSKGRGPFPIKSHFLPDEYQIH" XX SQ Sequence 2802 BP; 757 A; 551 C; 712 G; 781 T; 1 other; taatattacc ggatggccgc gcccgaaaaa agcaggtggg ccccatgata gtccgcgtcc 60 gcaaaagaaa gtggtccccg cgcacgcatg tttgtcggcc aataatagtt gcgccttgaa 120 tgctagatat tgagttttga ctttaaatac ttcgtcacga agtagtgrag cgcgtcaaaa 180 tgtggaatcc cgttagttaa cgattttccg gaaacccgtt cacggtttcc gttcgatgct 240 tgctgttaaa tacctgttac atctggaaca ggaatatgat cgcggtactg tcggggcgga 300 gtatatacgt gatctaatag gggtgctacg gtgtaagagt tatggcgaag cgaccaggag 360 atataataat ctcaacaccc gtatccaagg tgcggaggag gctgaacttc gacagcccat 420 acacgaaccg tgtggttgcc cctactgtcc gcgtcaccag aagcaaaata tgggccaaca 480 ggcccatgta tcggaagccc aagatgtaca ggatgtatcg aagccctgac gtccctaagg 540 gctgtgaagg cccatgtaag gttcagtctt atgaacagag agatgatgtt aagcatactg 600 gtatagtccg atgtgtcagt gaagttacgc gtgggtcagg cattacccat agagttggga 660 agaggttgtg tgtgaagtcc atatatatat tgggcaagat ctggatggat gagaatatca 720 agaagcaaaa tcatacgaac catgttatgt tttttctcgt tcgagataga aggccttatg 780 ggccgagtcc tcaagatttt ggacaagtgt tcaacatgtt tgataatgaa cctacgactg 840 caactgtgaa gaatgattat agggaccggt ttcaggtgtt acgtaaattc catgcgactg 900 tagttggtgg accctcaggg atgaaggaac aagctttggt taagaggttt tttaggatca 960 ataatcatat agtgtataat catcaggaac aggccaagta tgagaatcat accgagaatg 1020 cgttgttatt gtatatggca tgtacacatg cctcaaatcc tgtgtacgct acgcttaaaa 1080 tacgcatcta tttctatgat gcagtgacaa attaataaat attaaatttg attgcatgat 1140 cttgggatac agatagggtt cccacaaaaa ctacattcaa tacatgatgc actgcatcta 1200 ttacagttga aatcgaaata acacctaaat tagtgagata tttcatgact tgtgtcctaa 1260 aggttctgaa gaaacgccaa gtctgaggat gtaaacgagt ccagatccgg aagttgagaa 1320 aacacttgtg catccccagt gcttgcctca ggttgtagtt gaaccgaatc tggacatcta 1380 ttatgtcgtg agtcatgttg aacggcatgc tgtcgtggtt gaggattgtg aaatataggg 1440 gatttggaat ctcccagata aaggcgccac tcctccattg aagagcacca atgtcttccc 1500 ctgtgcgtaa atccatggtt gtgacaatta atgctgcgat agatggaaca gccacaagtt 1560 aggtcgatgc gtcgacgtct aggtgctctg agcttagctt gcctgtgcct ggctttgatc 1620 ggtggaggag aagagtggct ctgtgaggga gatgaagagc gcattcttga ttgcccaatt 1680 cttgagattg gaattcttgt cctcgtctag gtattcttta taggacgaat tggggcccgg 1740 attgcataag aagatggtgg gaatcccacc tttaatttga atgggctttc cgtattttgt 1800 gtttgattgc caatctcgtt gggcccccat gaattctttg aaatgcttta gataatgcgg 1860 gtctacgtcg tcaatgacgt tgtaccatgc gtcgtttgaa tatatcttgg gagacagatc 1920 caggtgtcca catagatagt tatgtgggcc cagagatcgg gcccacatcg tcttcccggt 1980 tcggctatca ccttcgagaa caatactgat cggtctccat ggccgcgcag cgggacggca 2040 tatattttcg gatacccata cttctatttc ctctgggact tgcgtaaatg aggatgataa 2100 gaacggacta acgtaagttt gtggcggagc ctggaagatt cgatccgcgt tagcagatat 2160 gttatggaac tgtaaaaaaa aggactttgg atccttttct ttgataattt gaagagcttc 2220 tgatttagaa gaagcattca acgcttctgc atatacctga gctaaatgct ggccctcccc 2280 cctggcactt ctggcatcga cttggaaaat tccatcgtca agaaattccc ctcccttttc 2340 aatgtaagcc ttgacatcgg acgatgattt agctccctga atgttcggat ggaaatgtgt 2400 tgatcgggat ggggaaatga gatcgaagaa tctggggttg gtacattgga acttgccttc 2460 gaattggatg agaacatgga gatgaggcac cccatcctga tgtagttctc tgcaaaccct 2520 aatgaatttg atattcgtcg ggtaagaaat ggcttttaat tgggaaaggg cctcttcctt 2580 tgctaaggag catcggggat aggttatgaa ataatttttg gcatttattt gaaaacgacc 2640 ggctctcggc atattggctg tcgttttgta tcgggggaca ctcaaaactc caggggaacg 2700 gtggaatggg gggcaatata tatgatgtcc cccaatggca tatgtgtaaa taggtagact 2760 tccattcaaa atttgaattg cgaatattgg cggccatccg at 2802 //