ID   AF111114; SV 1; linear; mRNA; STD; VRL; 1542 BP.
XX
AC   AF111114;
XX
DT   02-JAN-2000 (Rel. 62, Created)
DT   24-NOV-2000 (Rel. 65, Last updated, Version 3)
XX
DE   Raspberry ringspot virus putative coat protein mRNA, partial cds.
XX
KW   .
XX
OS   Raspberry ringspot virus
OC   Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus.
XX
RN   [1]
RP   1-1542
RX   DOI; 10.1016/S0168-1702(00)00158-1.
RX   PUBMED; 10958983.
RA   Scott S.W., Zimmerman M.T., Jones A.T., Le Gall O.;
RT   "Differences between the coat protein amino acid sequences of English and
RT   Scottish serotypes of Raspberry ringspot virus exposed on the surface of
RT   virus particles";
RL   Virus Res. 68(2):119-126(2000).
XX
RN   [2]
RP   1-1542
RA   Scott S.W., Zimmerman M.T., Jones A.T., Le Gall O.;
RT   ;
RL   Submitted (04-DEC-1998) to the INSDC.
RL   Plant Pathology and Physiology, Clemson University, P.O. Box 340377, 120
RL   Long Hall, Clemson, SC 29634-0377, USA
XX
DR   MD5; 49c07e438170ea34380a3e751be21470.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1542
FT                   /organism="Raspberry ringspot virus"
FT                   /strain="MX"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:12809"
FT   CDS             <1..>1542
FT                   /codon_start=1
FT                   /product="putative coat protein"
FT                   /note="CP"
FT                   /db_xref="GOA:Q9QAH3"
FT                   /db_xref="InterPro:IPR005054"
FT                   /db_xref="InterPro:IPR005305"
FT                   /db_xref="InterPro:IPR005306"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:Q9QAH3"
FT                   /protein_id="AAF21937.1"
FT                   /translation="AYEVDPLHLLYYEEVTVPKDTLGGALLARIDVRAKAATFDSAVWR
FT                   QWVRDGCLKPRIKMRITAATSCFSGIVLGACLDAYRRIPATTKADFTASLVTGLPNAMW
FT                   ATRDTSEIEWDIDLAAVCGHTFFALEDTFGYMDFLIYVLRGNEITAVADWSMYVSFHVD
FT                   WTQESMSATLIPTFVWPPKPSDIFLFKEVWGPYHFSLDGTEAKVDLDIMPGMAIPRGHT
FT                   TVRTFPRVVAAHFRSWTGKIKMSIQEVSSIFLTGTYVVGVSWNVTADLADIVTRKHWIV
FT                   KSGEIFELDLYCPYGKNPTFTGLANGKPYIIVHKLGGIIGPKDSVGTFGFMIHIHGLTG
FT                   MYKNPTLHSGDRSVGSAWFRITNIADDNLVFNIPGKIEDMAAVTGNYDVTNYVNPTSLL
FT                   FSVTGLHGGVIRLHITWCPSVNLGEAKGTLKYMQYLYHTSTENFFGDQATRGIIDQDGF
FT                   TVDIACGDFFGATRVGLTGEIERLGIYSSNAKSIAEIRVSFEILSMNFYGSTIKVT"
XX
SQ   Sequence 1542 BP; 382 A; 316 C; 378 G; 466 T; 0 other;
     gcctatgagg tagatccact acatttgttg tattatgagg aagtcactgt tccgaaggat        60
     acccttggtg gcgctttatt ggcccggata gatgttcgag ctaaggctgc aacttttgac       120
     agtgccgtat ggcgacaatg ggtaagagat ggttgtctca aacccagaat caaaatgcgc       180
     attactgcag ctacttcgtg tttttccggt atagtgctgg gcgcatgcct cgatgcttat       240
     cgcagaattc ctgcaactac gaaggcggat ttcaccgcct cccttgtaac aggactgcct       300
     aatgccatgt gggcaacgcg cgatacttca gagatcgagt gggatatcga tctcgcagca       360
     gtgtgcggac atactttttt tgcactcgag gatacctttg ggtacatgga ttttttaatc       420
     tatgtgctca ggggtaatga aatcactgct gtagctgatt ggtcgatgta cgtttccttt       480
     catgttgatt ggacgcagga aagtatgtcg gccacactta tcccaacctt tgtatggccc       540
     ccgaaaccat ctgacatatt tctttttaaa gaagtttggg gaccatacca tttctcgttg       600
     gatggtaccg aggcaaaagt cgatcttgat ataatgcccg gtatggccat cccccgtgga       660
     cacacaactg tgcgcacttt cccgcgtgtc gttgccgcac acttccggtc atggactggg       720
     aagatcaaaa tgtccattca ggaggtgtct tccatctttc tgactggaac atatgtggtt       780
     ggtgtgtcct ggaacgtcac tgcagatctc gctgatattg tcactcggaa gcactggatt       840
     gtcaaatccg gtgaaatttt tgagcttgat ctgtattgtc cctatggaaa aaaccctacc       900
     ttcacaggcc tagccaatgg taaaccatat atcattgtgc acaagcttgg aggaatcatt       960
     ggccccaaag attctgtagg aacgtttgga tttatgatac acatacacgg tctaactggc      1020
     atgtataaaa atcctacgtt gcatagtggt gatcgttctg tggggagtgc ttggttccgt      1080
     attaccaata tcgctgatga taatctggta tttaatatac caggcaaaat tgaggatatg      1140
     gctgcggtta ctgggaatta tgatgtcacc aactatgtta atccaactag tttgctgttt      1200
     tcagttactg gattgcatgg tggtgttata cgtctccata ttacgtggtg cccaagtgtg      1260
     aatcttggtg aagcgaaagg tacattgaaa tatatgcaat atctgtacca tacatctacc      1320
     gagaatttct ttggtgatca ggcaacgcgt ggaattatcg atcaggatgg ttttacggtt      1380
     gacattgcct gtggcgattt ctttggtgct acaagggttg gactgactgg ggaaattgag      1440
     agacttggta tttacagttc gaatgccaag tccatagctg aaattagggt ttcctttgaa      1500
     atactatcca tgaatttcta tggtagtact ataaaggtga cg                         1542
//