ID AF110996; SV 1; circular; genomic DNA; STD; VRL; 3024 BP. XX AC AF110996; XX DT 29-MAR-1999 (Rel. 59, Created) DT 03-MAR-2000 (Rel. 62, Last updated, Version 3) XX DE Snow goose hepatitis B virus isolate SGHBV1-13, complete genome. XX KW . XX OS Snow goose hepatitis B virus OC Viruses; Hepadnaviridae; Avihepadnavirus. XX RN [1] RP 1-3024 RX DOI; 10.1006/viro.1999.9844. RX PUBMED; 10489339. RA Chang S.F., Netter H.J., Bruns M., Schneider R., Frolich K., Will H.; RT "A new avian hepadnavirus infecting snow geese (Anser caerulescens) RT produces a significant fraction of virions containing single-stranded DNA"; RL Virology 262(1):39-54(1999). XX RN [2] RP 1-3024 RA Chang S.-F., Netter H.J., Bruns M., Schneider R., Froelich K., Will H.; RT ; RL Submitted (03-DEC-1998) to the INSDC. RL Heinrich-Pette-Institut, Martinistr. 52, Hamburg D-20251, Germany XX DR MD5; 49ea354ecb7a55e8dcadfe147341ebf5. DR EuropePMC; PMC140978; 12525630. DR EuropePMC; PMC2620893; 19004940. DR EuropePMC; PMC548436; 15708992. DR RFAM; RF01313; AHBV_epsilon. XX FH Key Location/Qualifiers FH FT source 1..3024 FT /organism="Snow goose hepatitis B virus" FT /host="Anser caerulescens" FT /isolate="SGHBV1-13" FT /mol_type="genomic DNA" FT /db_xref="taxon:89623" FT CDS join(2521..3024,1..414) FT /codon_start=1 FT /product="preC antigen" FT /db_xref="GOA:Q9W8I1" FT /db_xref="InterPro:IPR002006" FT /db_xref="InterPro:IPR036459" FT /db_xref="UniProtKB/TrEMBL:Q9W8I1" FT /protein_id="AAD21984.1" FT /translation="MWNLRITPLSFGAACQGIFTSTLLLSCLTVPLVCTIVYDTCLYMD FT VNASRALANVYDLPDDFFPKIEDLVRDAKDALEPYWKSDSIKKHVLIATHFVDLIEDFW FT QTTQGMHEIAEAIRAVIPPTTAPVPSGYLIQHDEAEEIPLGDLFKEQEERIVSFQPDYP FT ITARIHAHLKAYAKINEESLDRARRLLWWHYNCLLWGEATVTNYISRLRTWLSTPEKYR FT GRDAPTIEAITRPIQVAQGGRKTSTATRKPRGLEPRRRKVKTTVVYGRRRSKSRERRAS FT SPQRAGSPLPRSSSSHHRSPSPRK" FT CDS join(2650..3024,1..414) FT /codon_start=1 FT /product="core antigen" FT /db_xref="GOA:Q9W8R3" FT /db_xref="InterPro:IPR002006" FT /db_xref="InterPro:IPR036459" FT /db_xref="UniProtKB/TrEMBL:Q9W8R3" FT /protein_id="AAD21981.1" FT /translation="MDVNASRALANVYDLPDDFFPKIEDLVRDAKDALEPYWKSDSIKK FT HVLIATHFVDLIEDFWQTTQGMHEIAEAIRAVIPPTTAPVPSGYLIQHDEAEEIPLGDL FT FKEQEERIVSFQPDYPITARIHAHLKAYAKINEESLDRARRLLWWHYNCLLWGEATVTN FT YISRLRTWLSTPEKYRGRDAPTIEAITRPIQVAQGGRKTSTATRKPRGLEPRRRKVKTT FT VVYGRRRSKSRERRASSPQRAGSPLPRSSSSHHRSPSPRK" FT CDS 170..2533 FT /codon_start=1 FT /product="DNA-directed DNA polymerase" FT /db_xref="GOA:Q9WFA2" FT /db_xref="InterPro:IPR000201" FT /db_xref="InterPro:IPR000477" FT /db_xref="InterPro:IPR001462" FT /db_xref="UniProtKB/TrEMBL:Q9WFA2" FT /protein_id="AAD21980.1" FT /translation="MPRPLKQSLDQSKWLREAEKHLRLLENLVDSNLEEEKLKPQLSMG FT EDVQSPGKGEPLHPNVRAPLSHVVRAATTDLPRLGNKLPARHHLGKLSGLYQMKGCTFN FT PNWKVPDISDTHFDIDVTNECPSRNWKYLTPAKFWPKSISYFPIQAGVKNKYPDNVMQH FT ESIVGKYLSKLYEAGILYKRVSKHLVTFKGQPYNWERQYLVNQHLVPDGATSSKINGCS FT ENRRRRNTFKSTGRTHDTKRDSNLVREIPINRSRDGSCANNGRNKHPAKTGCLARRGRK FT EGRSHEPYPSRDSSTPLDTRRRSESSGGFSQISGRKTSRNHHHSTNTNSVETATRGRSS FT PGNQVVTRNATANPEFRASRACNKVPPRQEEENVWYLRGNTSWPNRITGKLFLVDKNSR FT NTTEARLVVDFSQFSKGKNAMRFPRYWSPNLTTLRRILPVGMPRISLDLSQAFYHLPLN FT PASSSRLAVSDGQRVYYFRKAPMGVGLSPFLLHLFTTALGSEISRRFNVWTFTYMDDFL FT LCHPNARHLNSISHAVCTFLQELGIRINFDKTTPSPVNEIRFLGYQIDHHYMRIEESRW FT KELRTVIKKIKPGEWYDWKCIQRFVGHLNFVLPFTKGNIEMLKPMYAAITNKVNFSFSS FT AYRTLLYKLTMGVCKLQINPKSSVPLPRVATDATPTHGAISHITGGSAVFAFSKVRDIH FT IQELLMVCLAGIMIKPRCILSDSTFVCHKRYQTLPWHFAMYAKQLLSPIQLYFVPSKYN FT PADGPSRHKPSDWTALTYTPLSKAIYIPHRLCGT" FT CDS 801..1790 FT /codon_start=1 FT /product="preS antigen" FT /db_xref="GOA:Q9WFA3" FT /db_xref="InterPro:IPR000349" FT /db_xref="UniProtKB/TrEMBL:Q9WFA3" FT /protein_id="AAD21982.1" FT /translation="MGQHQAKSMDARRIEGGEILLNQLAGRMIPKGTVTWSGKFPSIDH FT VMDHVQTMEEINTLQKQGAWPEGAGRRVGLTNPTPQEIPQPHWTPEEDQKAREAFRRYQ FT EERPPETTTIPPTPTPWKLQPGDDPLLGTKSLLETRLQTQNSEPAVPVIKYPLVKKKKM FT SGTFEGILAGLIGLLVSFFLLIKILEILRKLDWWWISLSSPKGKMQCAFPDTGAQISPH FT YVGSCPWGCPGFLWTYLRLFIIFLLILLVAAGLLYLTDNGSTILGKLQWESVSALFSSI FT SSLLPSDQKSLVALMFGLLLIWMTSSSATQTLVTLTQLATLSALFYKS" FT CDS 1287..1790 FT /codon_start=1 FT /product="S antigen" FT /db_xref="GOA:Q9WFA4" FT /db_xref="InterPro:IPR000349" FT /db_xref="UniProtKB/TrEMBL:Q9WFA4" FT /protein_id="AAD21983.1" FT /translation="MSGTFEGILAGLIGLLVSFFLLIKILEILRKLDWWWISLSSPKGK FT MQCAFPDTGAQISPHYVGSCPWGCPGFLWTYLRLFIIFLLILLVAAGLLYLTDNGSTIL FT GKLQWESVSALFSSISSLLPSDQKSLVALMFGLLLIWMTSSSATQTLVTLTQLATLSAL FT FYKS" XX SQ Sequence 3024 BP; 911 A; 680 C; 615 G; 818 T; 0 other; catgcacatc taaaagctta tgcaaaaatt aacgaggaat ctttggatcg ggctagacga 60 ttgctttggt ggcattacaa ctgtttactg tggggagaag ctactgtaac aaactatatt 120 tcccgcctcc gtacttggtt gtcaactcct gaaaagtata gaggcaggga tgccccgacc 180 attgaagcaa tcactagacc aatccaagtg gctcagggag gcagaaaaac atctacggct 240 actagaaaac ctcgtggact cgaacctaga agaagaaaag ttaaaaccac agttgtctat 300 gggagaagac gttcaaagtc ccgggaaagg agagcctctt caccccaacg tgcgggctcc 360 cctctcccac gtagttcgag cagccaccac cgatctccct cgcctaggaa ataaattacc 420 tgctaggcat cacttaggaa aattgtcagg tttatatcaa atgaagggct gtacttttaa 480 cccaaattgg aaagttcctg atatttcgga tactcatttt gatattgacg ttacaaatga 540 gtgcccttcc cgaaattgga aatatctgac tccggccaaa ttttggccca agagcatttc 600 ctactttcct atacaggcag gggttaaaaa caagtatcct gacaatgtga tgcaacatga 660 atcaatagta ggtaaatatt tgagcaagct ctatgaagca ggaatccttt ataagcgagt 720 atctaaacat ttggtcacat ttaaaggaca accttataat tgggaacgac aataccttgt 780 caatcaacat ctagtacctg atggggcaac atcaagcaaa atcaatggat gctcggagaa 840 tcgaaggagg agaaatactt ttaaatcaac tggcaggacg catgatacca aaagggacag 900 taacttggtc cgggaaattc ccatcaatag atcacgtgat ggatcatgtg caaacaatgg 960 aagaaataaa caccctgcaa aaacagggtg cctggccaga aggggcagga aggagggtag 1020 gtctcacgaa ccctacccct caagagattc ctcaacccca ctggacacca gaagaagatc 1080 agaaagctcg ggaggctttt cgcagatatc aggaagaaag acctccagaa accaccacca 1140 ttccaccaac accaactccg tggaaactgc aacccgggga cgatcctctc ctgggaacca 1200 agtcgttact agaaacgcga ctgcaaaccc agaattccga gccagccgtg cctgtaataa 1260 agtaccccct cgtcaagaag aagaaaatgt ctggtacctt cgagggaata ctagctggcc 1320 taatcggatt actggtaagc tttttcttgt tgataaaaat tctagaaata ctacggaagc 1380 tagattggtg gtggatttct ctcagttctc caaagggaaa aatgcaatgc gctttcccag 1440 atactggagc ccaaatctca ccacattacg taggatcctg cccgtgggga tgcccaggat 1500 ttctctggac ttatctcagg ctttttatca tcttcctctt aatcctgcta gtagcagcag 1560 gcttgctgta tctgacggac aacgggtcta ctattttagg aaagctccaa tgggagtcgg 1620 tctcagccct tttctcctcc atctcttcac tactgccctc ggatcagaaa tctctcgtcg 1680 ctttaatgtt tggactttta cttatatgga tgacttcctc ctctgccacc caaacgctcg 1740 tcaccttaac tcaattagcc acgctgtctg cacttttcta caagagctag gaatccgaat 1800 aaactttgac aaaaccacac catctccggt taatgaaatt agattcctcg gatatcaaat 1860 tgatcatcac tacatgagga ttgaagaaag cagatggaaa gaattaagaa ctgtaattaa 1920 gaaaattaaa ccaggagaat ggtatgactg gaaatgtatt caacgatttg ttgggcattt 1980 aaactttgta ttacctttta ctaaaggtaa tattgaaatg ttgaaaccaa tgtatgctgc 2040 tattactaac aaagttaact ttagcttctc ttctgcttat aggactttgc tatataaact 2100 aactatgggt gtttgtaaat tgcaaataaa tccaaagtcc tctgtacctt tgccacgtgt 2160 agccactgat gctacaccaa cacatggcgc aatatcccat atcaccggcg ggagcgcagt 2220 gtttgccttt tcaaaggtca gggacattca tatccaggaa ctgcttatgg tatgtttagc 2280 tgggataatg attaaaccca gatgtatctt atcagactcc acctttgttt gccacaaacg 2340 atatcagaca ttaccatggc attttgctat gtatgctaaa caattgctat ctcctataca 2400 attgtacttt gttcctagta aatacaatcc tgctgacggc ccatccaggc acaagccgtc 2460 tgattggaca gctcttacat acacccctct ctcgaaagca atatatattc cacataggct 2520 atgtggaact taagaattac acccctctcc ttcggagctg cttgccaagg tatatttacg 2580 tctacattgc tgttgtcatg tttgactgta cctttggtat gtaccatcgt ttatgatact 2640 tgcttatata tggatgttaa tgcttctaga gctttagcca atgtgtatga tctgcctgat 2700 gatttctttc caaaaattga ggatcttgta agggatgcta aggatgcttt ggaaccttat 2760 tggaaatctg actcaataaa gaaacatgta ttaatcgcta ctcattttgt tgatcttatt 2820 gaggattttt ggcagactac acagggtatg catgaaatcg ctgaagctat aagggcagtg 2880 attccaccga caactgctcc tgttccctct ggatatctca tccagcatga cgaagctgaa 2940 gagattccat taggggattt attcaaagaa caggaggaaa ggatagttag ttttcaacct 3000 gactatccaa taacagcgag aatt 3024 //