ID   AF110795; SV 1; linear; mRNA; STD; VRL; 1542 BP.
XX
AC   AF110795;
XX
DT   02-JAN-2000 (Rel. 62, Created)
DT   24-NOV-2000 (Rel. 65, Last updated, Version 3)
XX
DE   Raspberry ringspot virus putative coat protein mRNA, partial cds.
XX
KW   .
XX
OS   Raspberry ringspot virus
OC   Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Nepovirus.
XX
RN   [1]
RP   1-1542
RX   DOI; 10.1016/S0168-1702(00)00158-1.
RX   PUBMED; 10958983.
RA   Scott S.W., Zimmerman M.T., Jones A.T., Le Gall O.;
RT   "Differences between the coat protein amino acid sequences of English and
RT   Scottish serotypes of Raspberry ringspot virus exposed on the surface of
RT   virus particles";
RL   Virus Res. 68(2):119-126(2000).
XX
RN   [2]
RP   1-1542
RA   Scott S.W., Zimmerman M.T., Jones A.T., Le Gall O.;
RT   ;
RL   Submitted (03-DEC-1998) to the INSDC.
RL   Plant Pathology and Physiology, Clemson University, P.O. Box 340377, 120
RL   Long Hall, Clemson, SC 29634-0377, USA
XX
DR   MD5; 646ee7a3b1329ed6d1e83f11f1d6baf2.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1542
FT                   /organism="Raspberry ringspot virus"
FT                   /strain="Lloyd George"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:12809"
FT   CDS             <1..>1542
FT                   /codon_start=1
FT                   /product="putative coat protein"
FT                   /note="CP"
FT                   /db_xref="GOA:Q9QAH4"
FT                   /db_xref="InterPro:IPR005054"
FT                   /db_xref="InterPro:IPR005305"
FT                   /db_xref="InterPro:IPR005306"
FT                   /db_xref="InterPro:IPR029053"
FT                   /db_xref="UniProtKB/TrEMBL:Q9QAH4"
FT                   /protein_id="AAF21935.1"
FT                   /translation="AYEVDPLHLLYYESVDVPKDTLAGTLLTRIDVRAKAATFDSAVWR
FT                   QWVRDGCLKPKIKVRITAATSCFSGIVLGVCFDAYRRIPAATTKGITASLVTGLPNTIW
FT                   ATRDTSEVEWDIDLAAVCGHTFFALEDTFGYMDFLIYVLRGNEITAVADWSIYVSFHVD
FT                   WTQESMLATLIPTFVWPPKPTDISLLKEVWGPYRFTLDGTEAKGSFAIMPGTAIPHGQQ
FT                   IVRTFPRVVAAHFRSWTGKVRMSIQEVSSIFLTGTYMVGVSWNATADLADIVTRKHWIV
FT                   KSNEIFEVDLYCPYGENPTFTGQANGKPFIIVHKLGGIVGPKDSVGTFGFMIHIHGLTG
FT                   VYRNPTLHSGDRSVGSAWFRISNIVDDNLVFNIPGRIEDIIAAAGKYDVTNYVNPTSLL
FT                   FSVTGLHGGIIRLHITWCPNTNLGESKGTLKYMQYLYHTATENFFGDQATRGIIDQDGF
FT                   TVDIACGDFFGATRVGLPGEVERLGIYSSNAKSIAEIRVCFEVLSMNLYGSTIKVT"
XX
SQ   Sequence 1542 BP; 385 A; 318 C; 381 G; 458 T; 0 other;
     gcctatgagg tagatccatt acacttgttg tattatgaat ccgttgatgt gccaaaggat        60
     actcttgctg gtaccttgtt gactcggatt gacgttcgag caaaggctgc aacctttgat       120
     agtgctgtat ggcgacaatg ggttagagat ggttgtctca aacccaaaat caaggtacgc       180
     atcactgcag ccacatcgtg tttctccggt attgtactgg gtgtatgttt tgatgcatac       240
     cggagaatcc cagcagctac aacaaagggt atcaccgcat cccttgtgac aggcttgccc       300
     aataccatct gggcaacacg tgacacctca gaggtcgaat gggatatcga tctcgcggca       360
     gtgtgtggac atactttctt tgcgttagaa gacacctttg gatacatgga ttttctgatc       420
     tatgtactca gaggtaatga aatcaccgcc gttgccgatt ggtcaatata tgtttccttt       480
     catgttgatt ggacacagga aagtatgttg gccacactta tccctacttt tgtatggccc       540
     ccaaagccga ctgatatatc tcttcttaag gaagtgtggg gaccataccg ttttacgctg       600
     gatggtaccg aggctaaagg aagttttgct ataatgcccg gtacagctat tccccatggg       660
     cagcagattg tgcgcacatt tccccgagtc gttgccgcac acttccgatc atggactgga       720
     aaggtcagga tgtccattca agaagtttct tctattttcc tgaccggaac atatatggtt       780
     ggtgtgtcct ggaatgctac tgcggatctt gccgacattg tcactcggaa acattggatt       840
     gtaaagtcca atgagatttt tgaagtggac ctatattgtc catatggtga gaatcccacc       900
     tttacgggcc aggctaatgg aaagccattc attatagtgc acaaacttgg tggaattgtt       960
     gggcccaagg actcagttgg gacgtttggt tttatgatac acatacatgg tttgactggt      1020
     gtatatagga acccaacgtt acacagtggt gatcgttctg tggggagtgc ctggttccgc      1080
     atcagtaaca ttgtcgatga caatctggtg tttaacatac caggtagaat cgaagatatc      1140
     attgcggctg ctgggaaata tgatgtcaca aattatgtca atcctactag cttgctgttt      1200
     tcagtaaccg gattgcatgg tggtattata cgtctccata ttacgtggtg tccaaatacc      1260
     aatcttggtg agtcaaaggg tactttgaag tatatgcaat atctgtacca tacggccact      1320
     gagaatttct ttggcgacca agcaacacgt gggatcattg accaggatgg tttcacagtt      1380
     gatattgctt gtggtgattt ctttggcgct acgagagttg gtttgcccgg ggaagttgaa      1440
     agactcggca tttacagttc gaatgccaag tccattgctg aaattagggt ttgttttgaa      1500
     gtgctatcca tgaatttgta cggtagcacc atcaaagtga cg                         1542
//