ID   AF103991; SV 1; linear; genomic RNA; STD; VRL; 2216 BP.
XX
AC   AF103991;
XX
DT   12-MAR-1999 (Rel. 59, Created)
DT   28-SEP-1999 (Rel. 61, Last updated, Version 2)
XX
DE   Cucumber mosaic virus RNA3 strain pepo 3a protein and coat protein genes,
DE   complete cds.
XX
KW   .
XX
OS   Cucumber mosaic virus (cucumber mosaic cucumovirus)
OC   Viruses; Riboviria; Bromoviridae; Cucumovirus.
XX
RN   [1]
RP   1-2216
RA   Saitoh H., Fujiwara M., Kobori T., Ohki S.T., Osaki T.;
RT   "Nucleotide Sequence Analysis for RNA 3 of pepo-, SO- and MY17-Strains of
RT   Cucumber Mosaic Virus and its Comparison with Y-Strain";
RL   Bull. Osaka Prefect. Univ., Ser. B Agric. Life Sci. 51:33-37(1997).
XX
RN   [2]
RP   1-2216
RA   Saitoh H., Fijiwara M., Kobori T., Ohki S.T., Osaki T.;
RT   "Comparison of RNA 3 Sequence among Y-, pepo-, SO- and MY17-Strains of
RT   Cucumber Mosaic Virus";
RL   Nippon Shokubutsu Byori Gakkaiho 65:0(1998).
XX
RN   [3]
RP   1-2216
RA   Saitoh H., Fijiwara M., Kobori T., Ohki S.T., Osaki T.;
RT   ;
RL   Submitted (04-NOV-1998) to the INSDC.
RL   College of Agriculture, Osaka Prefecture University, Gakuen-cho, Sakai
RL   599-8531, Japan
XX
DR   MD5; f4587f1572606ac204da338651396fee.
DR   EuropePMC; PMC3550734; 23637513.
DR   EuropePMC; PMC3550809; 23730005.
DR   RFAM; RF01084; TLS-PK3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2216
FT                   /organism="Cucumber mosaic virus"
FT                   /chromosome="RNA3"
FT                   /strain="pepo"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:12305"
FT   CDS             120..959
FT                   /codon_start=1
FT                   /product="3a protein"
FT                   /note="movement protein"
FT                   /db_xref="InterPro:IPR000603"
FT                   /db_xref="UniProtKB/TrEMBL:Q77SM6"
FT                   /protein_id="AAD17924.1"
FT                   /translation="MAFQGTSRTLTQQSSAATSDDLQKILFSPEAIKKMATECDLGRHH
FT                   WMRADNAISVRPLVPEVTHGRIASFFKSGYDVGELCSKGYMSVPQVLCAVTRTVSTDAE
FT                   GSLRIYLADLGDKELSPIDGQCVSLHNHDLPALVSFQPTYDCPMETVGNRKRCFAVVIE
FT                   RHGYIGYTGTTASVCSNWQARFSSKNNNYTHIAAGKTLVLPFNRLAEQTKPSAVARLLK
FT                   SQLNNIESSQYLLTNVKINQNARSESEELNVESPPAAIGSSSASRSEAFRPQVVNGL"
FT   CDS             1257..1913
FT                   /codon_start=1
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q9YJR4"
FT                   /db_xref="InterPro:IPR000247"
FT                   /db_xref="InterPro:IPR023800"
FT                   /db_xref="InterPro:IPR037137"
FT                   /db_xref="UniProtKB/TrEMBL:Q9YJR4"
FT                   /protein_id="AAD17925.1"
FT                   /translation="MDKSESTGAGRNRRRRPRRGSRSAPSSADANFRVLSQQLSRLNKT
FT                   LSAGRPTINHPTFVGSERCKPGYTFTSITLKPPKIDRGSYYGKRLLLPDSVTEYDKKLV
FT                   SRIQIRVNPLPKFDSTVWVTVRKVPASSDLSVAAISAMFADGASPVLVYQYAASGVQAN
FT                   NKLLYDLSAMRADIGDMRKYAVLVYSKDDALETDELVLHVDVEHQRIPTSGVLPV"
XX
SQ   Sequence 2216 BP; 512 A; 526 C; 530 G; 648 T; 0 other;
     gtaatcttac cactgtgtgt gtgcgtgtgt gtgtgtcgag tcgtgttgtc cgcacatttg        60
     agtcgtgttg tccgcacatt ttattttatc tttatacagt gtgttagatt tcccgaggca       120
     tggctttcca aggtaccagt aggactttaa ctcaacagtc ctcagcggct acgtctgacg       180
     atcttcaaaa gatattattt agccctgaag ccattaagaa aatggctact gagtgtgacc       240
     taggccggca tcattggatg cgcgctgata atgctatttc agtccggccc ctcgttcccg       300
     aagtaaccca cggtcgtatt gcttccttct ttaaatctgg atatgatgtt ggtgaattat       360
     gctcaaaagg atacatgagc gtccctcagg tgttgtgtgc tgttactcga acggtttcca       420
     ctgatgctga agggtccttg agaatttact tagctgatct aggtgacaag gagttatctc       480
     ctatagatgg gcaatgcgtt tcgttacata accatgatct tcccgctttg gtgtctttcc       540
     aaccgacgta tgactgtcct atggaaacag ttgggaatcg caagcggtgt tttgctgtcg       600
     ttatcgaaag acatggttac attgggtata ccggtaccac agctagcgtg tgtagtaatt       660
     ggcaagcaag gttttcttct aagaataaca actacactca tatcgcagct gggaagactc       720
     tagtactgcc tttcaacaga ttagctgagc aaacaaaacc gtcagctgtc gctcgcctgt       780
     tgaagtcgca actgaacaac attgaatctt cgcaatatct gttaacgaat gtgaagatta       840
     atcagaatgc gcgcagtgag tccgaggaat taaatgttga gagccctccc gccgcaatcg       900
     ggagttcttc cgcgtcccgc tccgaagcct tcagaccgca ggtggttaac ggtctttagc       960
     actttggtgc atattagtat ataagtattt gtgtgtctgt acataatact atatctatag      1020
     tgtcctgtgt gagttgatac agtagacatc tgtgacgcga tgccgtgttg agaagggaac      1080
     acatctggtt ttagtaagcc tacatcacag ttttgaggtt caattcctct tactccctgt      1140
     tgagcccctt actttctcat ggatgcttct ccgcgagatt gcgttattgt ctactgacta      1200
     tatagagagt gtgtgtgctg tgttttctct tttgtgtcgt agaattgagt cgagtcatgg      1260
     acaaatctga atcaaccggt gctggtcgta accgtcgacg tcgtccgcgt cgtggttccc      1320
     gctccgcccc ctcctccgcg gatgccaact ttagagtctt gtcgcagcag ctttcgcgac      1380
     ttaacaagac gttgtcagcc ggtcgtccaa ctattaacca cccaaccttt gtagggagtg      1440
     agcgttgtaa acctgggtac acgttcacat ctattaccct aaagccacca aaaatagacc      1500
     gcgggtccta ttatggtaaa aggttgttat tacctgattc agtcacggaa tatgataaga      1560
     aacttgtttc gcgcattcaa attcgagtta atcctttgcc gaaatttgat tctaccgtgt      1620
     gggtgacagt ccgtaaagtt cctgcctcct cggacttatc cgttgccgcc atctctgcta      1680
     tgttcgcgga cggagcctca ccggtactgg tttatcagta tgctgcatct ggagttcaag      1740
     ctaacaacaa actgttatat gatctttcgg cgatgcgcgc tgatataggc gacatgagaa      1800
     agtacgccgt cctcgtgtac tcaaaagacg atgcactcga gacggacgag ctggtacttc      1860
     atgttgacgt cgagcaccaa cgcattccca cgtctggggt gctcccagtc tgattccgtg      1920
     ttttccagaa ccctccctcc gatttctgtg gcgggagctg agttggcagt tctgctataa      1980
     actgtctgaa gtcactaaac gtttttacgg tgaacgggtt gtccatccag cttacggcta      2040
     aaatggtcag tcgtggagaa atccacgcca gcagacttac aagtctctga ggcgcctttg      2100
     aaaccatctc ctaggtttct tcggaaggac ttcggtccgt gtacttctag cacaatgtgc      2160
     tagtttcagg gtacgggtgc ccccccactt tcgtgggggc ctccaaaagg agacca          2216
//