ID   AF102023; SV 1; linear; genomic RNA; STD; VRL; 2204 BP.
XX
AC   AF102023;
XX
DT   11-NOV-1999 (Rel. 61, Created)
DT   18-APR-2000 (Rel. 63, Last updated, Version 3)
XX
DE   Influenza B virus (B/Yamagata/16/88) polymerase (PA) gene, complete cds.
XX
KW   .
XX
OS   Influenza B virus (B/Yamagata/16/1988)
OC   Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Insthoviricetes;
OC   Articulavirales; Orthomyxoviridae; Betainfluenzavirus.
XX
RN   [1]
RP   1-2204
RX   PUBMED; 10725418.
RA   Hiromoto Y., Saito T., Lindstrom S.E., Li Y., Nerome R., Sugita S.,
RA   Shinjoh M., Nerome K.;
RT   "Phylogenetic analysis of the three polymerase genes (PB1, PB2 and PA) of
RT   influenza B virus";
RL   J. Gen. Virol. 81(Pt 4):929-937(2000).
XX
RN   [2]
RP   1-2204
RA   Hiromoto Y.;
RT   ;
RL   Submitted (28-OCT-1998) to the INSDC.
RL   Virology I, National Institute of Infectious Diseases, 1-23-1 Toyama
RL   Shinjuku-ku, Tokyo 162-8640, Japan
XX
DR   MD5; 80398a3c0f1b16faec0bf205c3065c83.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2204
FT                   /organism="Influenza B virus (B/Yamagata/16/1988)"
FT                   /strain="B/Yamagata/16/88"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:416674"
FT   CDS             1..2181
FT                   /codon_start=1
FT                   /gene="PA"
FT                   /product="polymerase"
FT                   /db_xref="GOA:Q9QLI4"
FT                   /db_xref="InterPro:IPR001009"
FT                   /db_xref="InterPro:IPR037534"
FT                   /db_xref="InterPro:IPR038372"
FT                   /db_xref="UniProtKB/TrEMBL:Q9QLI4"
FT                   /protein_id="AAF06892.1"
FT                   /translation="MDTFITRNFQTTIIQKAKNTMAEFSEDPELQPAMLFNICVHLEVC
FT                   YVISDMNFLDEEGKAYTALEGQGKEQNLRPQYEVIEGMPRNIAWMVQRSLAQEHGIETP
FT                   KYLADLFDYKTKRFIEVGITKGLADDYFWKKKEKLGNSMELMIFSYNQDYSLSNESSLD
FT                   EEGKGRVLSRLTELQAELSLKNLWQVLIGEEDVEKGIDFKLGQTISRLRDISVPAGFSN
FT                   FEGMRSYIDNIDPKGAIERNLARMSPLVSATPKKLKWEDLRPIGPHIYNHELPEVPYNA
FT                   FLLMSDELGLANMTEGKSKKPKTLAKECLEKYSTLRDQTDPILIMKSEKANENFLWKLW
FT                   RDCVNTISNEEMSNELQKTNYAKWATGDGLTYQKIMKEVAIDDETMCQEEPKIPNKCRV
FT                   AAWVQTEMNLLSTLTSKRALDLPEIGPDVAPVEHVGSERRKYFVNEINYCKASTVMMKY
FT                   VLFHTSLLNESNASMGKYKVIPITNRVVNEKGESFDMLYGLAVKGQSHLRGDTDVVTVV
FT                   TFEFSSTDPRVDSGKWPKYTVFRIGSLFVSGREKSVYLYCRVNGTNKIQMKWGMEARRC
FT                   LLQSMQQMEAIVEQESSIQGYDMTKACFKGDRVNSPKTFSIGTQEGKLVKGSFGKALRV
FT                   IFTKCLMHYVFGNAQLEGFSAESRRLLLLIQALKDRKGPWVFDLEGMYSGIEECISNNP
FT                   WVIQSAYWFNEWLGFEKEGSKVLESVDEIMDE"
XX
SQ   Sequence 2204 BP; 827 A; 339 C; 509 G; 529 T; 0 other;
     atggatactt ttattacaag aaacttccag actacaataa tacaaaaggc caaaaacaca        60
     atggcagaat ttagtgaaga tcctgaatta caaccagcaa tgctattcaa catctgcgtc       120
     catctagagg tttgctatgt aataagtgac atgaattttc ttgacgaaga aggaaaagca       180
     tatacagcat tagaaggaca aggaaaagaa caaaacttga gaccacaata tgaagtaatt       240
     gagggaatgc caagaaacat agcatggatg gtccaaagat ccttagctca agagcatgga       300
     atagagactc caaagtatct ggctgatttg tttgattata aaaccaagag gtttatagaa       360
     gttggaataa caaaaggatt ggctgatgat tacttttgga aaaagaaaga aaagctggga       420
     aatagcatgg aactgatgat attcagctac aatcaagact attcgttaag taatgaatcc       480
     tcattggatg aggaagggaa agggagagtg ctaagcagac tcacagaact tcaggctgaa       540
     ttaagtctga aaaacctatg gcaagttctc ataggagaag aagatgttga aaagggaatt       600
     gactttaaac ttggacaaac aatatctaga ctaagggata tatctgttcc agctggtttc       660
     tccaattttg aaggaatgag gagctacata gacaatatag atcctaaagg agcaatagag       720
     agaaatctag caaggatgtc tcccttagta tcagccacac ctaaaaagtt gaaatgggag       780
     gacctaagac caatagggcc tcacatttac aaccatgagc taccagaagt tccatataat       840
     gcctttcttc taatgtctga tgaattgggg ctggccaata tgactgaggg aaagtccaaa       900
     aaaccgaaga cattagccaa agaatgtcta gaaaagtact caacactacg ggatcaaact       960
     gacccaatat taataatgaa aagcgaaaaa gctaacgaaa acttcctatg gaagctgtgg      1020
     agggactgtg taaatacaat aagtaatgag gaaatgagta acgagttaca gaaaaccaat      1080
     tatgccaagt gggccacagg agatggatta acataccaga aaataatgaa agaagtagca      1140
     atagatgacg aaacaatgtg ccaagaagag cctaaaatcc ctaacaaatg tagagtggct      1200
     gcttgggttc aaacagagat gaatctattg agcactctga caagtaaaag agctctggac      1260
     ctaccagaaa tagggccaga cgtagcaccc gtggagcatg tagggagtga aagaaggaaa      1320
     tactttgtta atgaaatcaa ctactgtaag gcctccacag ttatgatgaa gtatgtgctt      1380
     tttcacactt cattgttgaa tgaaagcaat gccagcatgg gaaaatataa agtaatacca      1440
     ataaccaata gagtagtaaa tgaaaaagga gaaagtttcg acatgcttta tggtctggcg      1500
     gttaaaggac aatctcatct gaggggagat actgatgttg taacagttgt gactttcgaa      1560
     tttagtagta cagatcccag agtggactca ggaaagtggc caaaatatac tgtgtttagg      1620
     attggctccc tatttgtgag tgggagggaa aaatctgtgt acctatattg ccgagtgaat      1680
     ggcacaaata agatccaaat gaaatgggga atggaagcta gaagatgtct gcttcaatca      1740
     atgcaacaaa tggaagcaat tgttgaacaa gaatcatcga tacaaggata tgacatgacc      1800
     aaagcttgtt tcaagggaga cagagtaaat agccccaaaa ctttcagtat tgggactcaa      1860
     gaaggaaaac tagtaaaagg atcctttggg aaagcactaa gagtaatatt taccaaatgt      1920
     ttgatgcact atgtatttgg aaatgcccaa ttggaggggt ttagtgccga gtctaggaga      1980
     cttctactgt taattcaagc attaaaggac agaaagggcc cttgggtgtt cgacttagag      2040
     ggaatgtatt ctggaataga agaatgtatt agtaacaacc cttgggtaat acagagtgca      2100
     tactggttca atgaatggtt gggctttgaa aaggagggga gtaaagtatt agaatcagta      2160
     gatgaaataa tggatgaatg aaaaaaagac atagtactca attt                       2204
//