ID AF071551; SV 1; linear; genomic RNA; STD; VRL; 3379 BP. XX AC AF071551; XX DT 23-JUN-1998 (Rel. 56, Created) DT 23-JUN-1998 (Rel. 56, Last updated, Version 1) XX DE Cucumber mosaic virus RNA1 1a gene, complete cds. XX KW . XX OS Cucumber mosaic virus (cucumber mosaic cucumovirus) OC Viruses; Riboviria; Bromoviridae; Cucumovirus. XX RN [1] RP 1-3379 RA Zhang G., Wang L., Fang R.; RT "Nucleotide sequence of RNA1 of cucumber mosaic virus SD strain"; RL Unpublished. XX RN [2] RP 1-3379 RA Zhang G., Wang L., Fang R.; RT ; RL Submitted (11-JUN-1998) to the INSDC. RL Laboratory of Plant Biotechnology, Institute of Microbiology, Zhong Guan RL Cun, Beijing 100080, China XX DR MD5; 28c629aa8cf1233baacde744ac5b965c. DR EuropePMC; PMC136033; 11884564. DR EuropePMC; PMC5096307; 27814723. DR RFAM; RF01084; TLS-PK3. XX FH Key Location/Qualifiers FH FT source 1..3379 FT /organism="Cucumber mosaic virus" FT /chromosome="RNA1" FT /strain="SD" FT /mol_type="genomic RNA" FT /db_xref="taxon:12305" FT CDS 96..3077 FT /codon_start=1 FT /product="1a" FT /db_xref="GOA:O90227" FT /db_xref="InterPro:IPR002588" FT /db_xref="InterPro:IPR021002" FT /db_xref="InterPro:IPR022184" FT /db_xref="InterPro:IPR027351" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:O90227" FT /protein_id="AAC24006.1" FT /translation="MATSSFNINELVASHGDKGLLATALVDKTAHEQLEEQLQHQRRGR FT KVYIRNVLGVKDSEVIRNRYGGKYDLHLTQQEFAPHGLAGALRLCETLDCLDSFPSSGL FT RQDLVLDFEGSWVTHYLRGHNVHCCSPCLGIRDKMRHAERLMNMRKIILNDPQQFDGRQ FT PDFCTHPAADCKVQAHFAISIHGGYDMGFRGLCEAMNAHGTTILKGTMMFDGAMMFDDQ FT GVIPELNCQWRKIRSAFSETEDVTPLTEKLNSTIFSRVRKFKTMVAFDFINESTMSYVH FT DWENIKSFLTDQTYSYRGMTYGIERCVIHAGIMTYKIIGVPGMCPPELIRHCIWFPSIK FT DYVGLKIPASQDLVEWKTVRILTSTLRETEEIAMRCYNDKKAWMEQFKVILGVLSAKSS FT TIVINGMSMQSGERIDINDYHYIGFAILLHTKMKYEQLGKMYDMWNASSISKWFAALTR FT PLRVFFSGVVHALFPTLRPREEKEFLIKLSTFVTFNEECSFDGGEEWDVISSAAYVATQ FT AVTDGKVLAAQKAEKLAEKLAQPVIEVSDRPEASSQTPDDTADVCGREQEVSELDSLSA FT QTRSPITRVAERATAMLEYAAYEKQLHDTTVSNLRRIWNMAGGDDKRNSLEGNLKFVFD FT TYFTVDPMVNIRFSTGRWMRPVPEGIVYSVGYNERGLGPKSDGELYIVNSECVICNSES FT LSAVTRSLQAPTGTISQVDGVAGCGKTTAIKSIFDPSTDMIVTANKKSAQDVRMALFKS FT SDSKEACAFVRTADSVLLNECPTVSRVLVDEVVLLHFGQLCAVMSKLKAVRAICFGDSE FT QIAFSSRDASFDMRFSKIIPDETSDADTTFRSPQDVVPLVRLMATKALPKGTHSKYTKW FT VSQSKVRRSVTSRAIASVTLVDLDPSRFYITMTQADKASLISRAKEMNLPKTFWDERIK FT TVHESQGIPEDHVTLVRLKSTKCDLFKKFSYCLVALTRHKVTFRYEYCGVLNGDLVAEC FT IARA" XX SQ Sequence 3379 BP; 839 A; 752 C; 830 G; 958 T; 0 other; gttttattta caagagcgta cggttcaatc cctgcctccc ctgtaaaact accctttgaa 60 aacctctctt tcttaatctt ttctctgaaa ttcctatggc gacgtcctcg ttcaacatta 120 atgaattggt agcctcccac ggcgataaag gactactcgc gaccgccctc gttgataaga 180 cagctcatga gcagctcgag gagcaattac agcatcaacg tagaggccgt aaggtctaca 240 tccgaaacgt tttgggtgta aaggattccg aggtcatccg gaatcggtat ggagggaagt 300 acgacctcca tcttacccag caggagtttg ctccccacgg cctagctggt gccctccgct 360 tgtgtgaaac tctcgattgt ctagactctt tcccttcatc aggtctgcgg caggacctcg 420 tcttagactt cgaaggaagt tgggtcacac attacctccg cggacataac gtacactgct 480 gttccccttg tttgggtatc cgcgataaaa tgcgccacgc ggaacgtttg atgaacatgc 540 gcaagatcat cctgaacgat ccacaacagt tcgatggtcg acagccggac ttttgcactc 600 atccggctgc ggattgcaaa gtacaagccc actttgctat atctattcat ggaggttatg 660 atatgggctt tagaggacta tgtgaagcga tgaatgctca cggaaccact attttgaagg 720 gaacgatgat gttcgatggt gctatgatgt ttgacgacca aggtgtaata cctgagctta 780 attgtcagtg gaggaagatt aggagtgctt tctctgaaac tgaagacgtc acaccgctga 840 ccgagaaact taattccaca atattctccc gcgtgcgtaa attcaagact atggtggcct 900 ttgattttat caatgagtct accatgtctt atgttcatga ttgggagaat ataaaatctt 960 ttctcacgga tcagacttat tcataccgag ggatgactta cggtattgag cggtgcgtta 1020 ttcacgctgg tattatgacg tataagatca ttggtgtccc tgggatgtgc ccacctgaac 1080 tcattcggca ttgtatttgg ttcccctcta tcaaggacta tgttggtcta aagattcccg 1140 cgtcgcagga cttggttgaa tggaaaacag tgcgtatttt aacgtcaaca ttacgtgaga 1200 cggaagagat tgctatgagg tgttacaacg ataagaaagc gtggatggaa cagtttaagg 1260 ttatcctagg tgttttatcc gcgaaatcat ctaccattgt tattaatggt atgtccatgc 1320 aatctggcga acgcatagat attaacgatt accactatat tggcttcgct attcttcttc 1380 acacaaaaat gaagtatgaa caactgggaa aaatgtatga tatgtggaat gcttcgagta 1440 tttcgaagtg gtttgcagcg ttgactcgtc cgctgcgtgt atttttctcc ggtgtagttc 1500 acgcgctgtt cccgactttg agaccccgcg aggaaaaaga attcctgatt aagctctcca 1560 ccttcgttac tttcaatgaa gagtgctcat ttgatggtgg agaggaatgg gacgtgatat 1620 catctgctgc atacgttgct acgcaggctg ttaccgatgg gaaagttttg gctgcgcaga 1680 aagccgagaa gctcgctgag aagcttgcac aacccgtgat tgaggtatcg gacagacctg 1740 aggcgtcatc tcaaacgccc gatgatacgg ctgatgtttg tggaagagag caagaggttt 1800 cggaacttga ctctctatca gctcagacac gttcccccat cactagagtt gctgaaaggg 1860 ctactgctat gttagagtat gccgcttacg agaaacagct acatgatacc acggtgtcta 1920 atttgagacg tatttggaac atggcgggcg gtgatgacaa gaggaactcc ctcgaaggta 1980 atttgaagtt tgttttcgac acgtacttta ctgttgatcc catggtgaac attcgtttct 2040 ccacgggtcg gtggatgcgt cctgtgcccg agggaattgt ttactctgtt ggttataacg 2100 aacgcggttt aggtcctaag tctgatggag agctttacat tgtcaatagt gagtgtgtga 2160 tttgcaatag cgagtctttg tctgctgtca ctcgctcact acaagctcca actggaacta 2220 tcagtcaagt tgacggggtt gctggttgtg ggaagaccac ggcaataaaa tccatttttg 2280 atccgtccac tgacatgatc gtgaccgcga acaagaaatc cgctcaagac gttcgaatgg 2340 cactctttaa atcgtcagat tccaaagaag cttgcgcctt tgttcgtact gctgattctg 2400 tcctactcaa tgaatgtccg actgttagta gggttttggt ggacgaggtt gtgctgcttc 2460 actttggtca attgtgtgct gtcatgtcca agctgaaggc tgtgcgagct atatgttttg 2520 gggattcgga gcaaattgct ttttcttctc gcgatgcctc gtttgatatg cgtttctcga 2580 agattattcc tgatgaaact agtgatgcgg ataccacatt ccgtagccca caagacgttg 2640 tgccgcttgt gcgtttgatg gctacgaagg ctctcccgaa aggaactcat tcgaaatata 2700 cgaaatgggt ttctcaatct aaagtgagaa gatctgttac atctcgtgcc atcgctagtg 2760 tgacattggt tgatttggat ccttccaggt tttatatcac gatgacccaa gctgataagg 2820 cctcactgat ttcgagagca aaagagatga atctaccaaa gactttctgg gacgaaagaa 2880 tcaaaaccgt gcatgagtct caaggcatcc ctgaagatca cgttactttg gtaagattaa 2940 agagcacaaa atgtgacctg ttcaaaaaat tctcatattg tcttgttgcc ttgacaagac 3000 acaaggtcac attccgctac gagtactgtg gtgtattgaa cggcgattta gtcgccgaat 3060 gtattgctcg tgcttagcgg gttccccccg gcgggcctcc ctccagtttt ctgaggcggg 3120 agctgagttg gcagttctgc tacaaactgt ctgaagtcac taaacgcttt gcggtgaacg 3180 ggttgtccat ccagcttacg gctaaaatgg tcagtcgtgg agaaatccac gccagcagac 3240 ttacaagtct ctgaggcgcc tttgaaacca tctcctaggt ttcttcggaa ggacttcggt 3300 ccgtgtactt ctagcacaaa gtgctagttt cagggtacgg gtgccctccc actttgtggg 3360 agcctcctaa aggagacca 3379 //