ID AF067124; SV 2; linear; genomic RNA; STD; VRL; 7644 BP. XX AC AF067124; XX DT 28-JUL-1999 (Rel. 60, Created) DT 02-JUL-2004 (Rel. 80, Last updated, Version 3) XX DE Wheat yellow mosaic virus RNA1 270 kDa precursor protein gene, complete DE cds. XX KW . XX OS Wheat yellow mosaic virus OC Viruses; Riboviria; Potyviridae; Bymovirus. XX RN [1] RP 1-7644 RX DOI; 10.1007/BF02881780. RX PUBMED; 18726520. RA Yu J., Yan L., Su N., Hou Z., Li D., Han C., Cai Z., Liu Y.; RT "Analysis of nucleotide sequence of wheat yellow mosaic virus genomic RT RNAs"; RL Sci. China, C, Life Sci. 42(5):554-560(1999). XX RN [2] RP 1-7644 RA Yu J.; RT ; RL Submitted (18-MAY-1998) to the INSDC. RL National Laboratory for Agrobiotechnoloy, China Agricultural University, RL No. 2 Yuanmingyuan West Rd., Beijing 100094, People's Republic of China XX RN [3] RC Sequence update by submitter RP 1-7644 RA Yu J.; RT ; RL Submitted (30-JUN-2004) to the INSDC. RL National Laboratory for Agrobiotechnoloy, China Agricultural University, RL No. 2 Yuanmingyuan West Rd., Beijing 100094, People's Republic of China XX DR MD5; 0a9f31b95979c9ab91159d38e927ddae. DR EuropePMC; PMC3260119; 22185375. DR EuropePMC; PMC6383263; 30786887. XX CC On Jun 30, 2004 this sequence version replaced gi:5596367. XX FH Key Location/Qualifiers FH FT source 1..7644 FT /organism="Wheat yellow mosaic virus" FT /chromosome="RNA1" FT /host="Triticum aestivum" FT /strain="C" FT /isolate="HC-1" FT /mol_type="genomic RNA" FT /country="China" FT /clone="pGWY30; pGWS409; pGWS12" FT /db_xref="taxon:75746" FT 5'UTR 1..162 FT CDS 163..7386 FT /codon_start=1 FT /product="270 kDa precursor protein" FT /note="encodes viral coat protein and polymerase" FT /db_xref="GOA:Q9QMA1" FT /db_xref="InterPro:IPR001205" FT /db_xref="InterPro:IPR001592" FT /db_xref="InterPro:IPR001650" FT /db_xref="InterPro:IPR001730" FT /db_xref="InterPro:IPR007094" FT /db_xref="InterPro:IPR009003" FT /db_xref="InterPro:IPR013648" FT /db_xref="InterPro:IPR014001" FT /db_xref="InterPro:IPR027417" FT /db_xref="UniProtKB/TrEMBL:Q9QMA1" FT /protein_id="AAD45560.1" FT /translation="MEQTAAQAAARHATHTNSAQEQPPVSPMNLSANFVAPELFYASNV FT EKIKSIMRMRRPTRIIDAISRDFELVAFLILSPAHLMQLETTLRCEMKSSIVPIANSDA FT GFETCAVLKTALDGMKYHFGTTTLEQGWTSMMKHADSCLQESSSSAVAMLQTQVQKVGS FT LLISGKNRVESCELYVLHLTARAFRTEYGLKGTCFGEHCALLHDLKACVCGTVPKEFLW FT AKTKKHSMFTIPEWIARTPTDCFMLCLRAIPIFRRCTMAMSLLYWSCVATVNFPSVMAF FT LFKRQFTKYIAHSFAKHSIYFLMLGIVALLWAFRTYASKNPKIALQARSANEKEKKLMM FT LLASAVGITYLFDYDIAEALGNSLHKISRLSSYLMDDHQGIASRMFSATHGLQAGDNTE FT DAVTTIISDLLSITFQIVDEDVTAGVLEEVSDTTFSSWVSVNTLAGRNMSRPLQYPVNQ FT TYPLTPMNVLLQLQAMVDSDNGWSMVVGHTGSGKSTYLPVQYSNYLAKKLDRRQQILVC FT EPTQAATENVCSGIAANLGGAVYGRHEGWSRMGDHCIQVMTYGSALQCHAMDPGFISTF FT DAIFLDEAHDVKEHSLVFESICNNFKSVRKFYVSATPRDGSSCPDATRKFPLTVQQSVC FT DSYKKFIAAQGGDDLLDVTRYDTVLVFLAGRPECVKAANAWNANITGEKRAFSLSSDNF FT ATDFAMLTERLKTHKTIIFTTNIIETGVTLSVDCVVDFGYTMRPSLDLNHKTLRLERRR FT VTANERKQRIGRAGRLKEGHAMCVGDEDRSVNVVSPGCLYGCGLLSFKHNVPFYMNDTF FT ESSWLEGVTKSQADTMTIFKLPIFLTRDLVNSDGSVAKEFLDILNKHQFTTSDIKQAPH FT SIARHLFPTWASYFALFQSINYGEEKDEIPSNLRHARVPFSISTLSKFDWNALALACKQ FT HRPTVASSFQSLDQPARVVTLQTNSANILGSIAHLCNMRNNYKTLIDSNNHVKQSMATN FT VMFKWFSSSHITANLDRNLSRCLANLSVVETTISALKQISAENSQVMASPTLQSHLENI FT IGELQSNDMLTDETLSNALGIFNPKTNLFLLLATKGFKLVYVICLLILINLIYRLLSHW FT RAWLKNKNDNVNSDALTNTMTVQEGSEILKEVLKMTPAMRREVTKDMKVAVAVADNDST FT FLSCFPYEHIDLEGKGNQYRPREDARLMYSTRDDATFDTWNEKAKEKRQKISDRAEPEM FT KQPYQKRPYYNFYDLQTDSNILEAIFYTTEGDEFFRTANPNKDMHSVAEKLKAFLDTKP FT IIGRLQRQLLEETAQVVIKDDKGTAHRMDISTHNPNTLKNNGSGRVGYDEHRGDFRQES FT PALESPYELEAEFGNSKDEVMLEASTGILLSQVSVDVATRIGRISIGTFNVNCFLYSDW FT ILAPAHFQDRNGAVTIEFPDQTVSTTTDNLNAHGVKRFYGLDLIAIRRPPSLRPEKKLV FT KAFAITEPVIAQMVFIDSQGIRKFSQSDWIRREAGSNRWSHKISTQNGMCGCLFWMLER FT TVSLGIHVATNRTTGRNEFQPFSREAVDFINGPGNKVPFSPWTFNRPACGYRQGEATFD FT SRTIQNQASDTLSKINNSILGFGSDLKGQLVQPVTPALRTRFEALFGGGSFELVGTMNK FT GLIDKHIIVGENDNVHDFMREHPTFAWLQGFMDEYAPSVLNYSAYYKDLCKYNRKKHQL FT SFNPHELRSATAGMIRMLEDAGLTQGDVRTPQQVVSDMQWNTSAGPSYQGKKRDVCAHL FT SEQEVLHLAETSRHRFLACNSIGIWNGSLKAELRTIEKVEAEKTRVFTASPITSLFAMK FT FYVDDFNKKFYATNLKAPHTVGINKFSRGWEMLHDKLNRPGWLHGSGDGSRFDSSIDPF FT FFDIIKEIRKHFLPVEHHRAIDLIYDEILNTNICLANGMVIRKNVGNNSGQPSTVVDNT FT LVLMVSFLYAYIHKTGDHMLKKLNDRFVFVCNGDDNKFAISPEFDAEFGHDFSPELTEL FT GLTYEFDDITDDICANPYMSLTMVRTPFGIGFSLPVERIVAIMQWAKKGGVLHSYLAGI FT SAIYESFNTPKLFKSVYAYLLWLTEEHGSDILAAMTGTATALPIPSMLDVYRLHYGDSS FT IELQAADTQTDAQKEEARLAAATKKAADDADAARLRKVEADRVEAARVKKASDDKKARD FT LTATKVDDGKIVADAGTKRTNAATKEKWSLPETKPVNAGLKLRISMDKLKSAPKSIVEH FT DNSVALDSEVKKWSDAVRTSLGITTDEAWFNALIPFLGWCANSGASDKHAENQTMQVDN FT GTGALTEMSLSPFIVHARLNGGLRRILRAYSDETLLLLQEHKIVTKWAMKHGASAHAAY FT AFDFFFPRPWMNPQDIEVAKQARLAALGTGTYNTMLTSDTTNLRKTTNRRVLDTDGHPE FT LT" FT 3'UTR 7387..7644 XX SQ Sequence 7644 BP; 2177 A; 2019 C; 1670 G; 1778 T; 0 other; aaaataaaac caccacaaac caaaaccatc aaaacgatca caagctaaca cataccttct 60 gcttcctttt gagcccaagc tttcgtctct cactcccctc gcgacgcctc actctttcca 120 atccagccct tcgcctttgc cttcttcttc actcccttcg agatggagca gacagcagcc 180 caggctgccg cgcgccacgc cacacacacg aactccgcac aagagcagcc tcctgtcagc 240 cctatgaatc tgtctgcaaa ctttgttgcc cctgagcttt tctacgcttc aaatgtcgag 300 aagatcaaga gtatcatgag gatgcgtaga ccgacgcgca tcattgatgc gatatccagg 360 gatttcgaac ttgttgcttt tctcatactc agccccgcac atctcatgca gctagaaacc 420 acactacgct gcgagatgaa atccagcatt gtacctattg caaactcaga tgctggtttt 480 gagacttgcg ccgtcctcaa aacagcgctc gatggaatga agtatcactt tggaacaacc 540 acactcgagc aaggctggac atccatgatg aaacacgctg acagctgcct gcaagagagt 600 tcttcctctg ccgtcgccat gttacaaact caagtccaga aagtcggctc cctcttaatc 660 agcggaaaaa atcgcgtaga aagttgcgaa ctttatgtct tacacctcac cgcgcgcgct 720 ttcaggaccg aatatggatt aaagggtact tgctttggag aacactgcgc tttgttgcac 780 gacttaaaag catgcgtttg tggtaccgtg ccaaaagagt ttttgtgggc gaaaaccaaa 840 aagcactcca tgttcactat cccagagtgg atcgcacgta cgccaacaga ctgtttcatg 900 ctgtgtcttc gcgctatacc tatctttcgt aggtgcacga tggcaatgtc tttactttat 960 tggtcgtgtg tagcaactgt taacttccct tctgttatgg cttttctttt taagcgtcag 1020 ttcactaaat acatagccca ttccttcgcc aagcactcca tctatttcct tatgttaggt 1080 attgtagccc tactatgggc atttcgcact tatgcttcga aaaacccaaa aatagctctc 1140 caagctagga gcgcaaacga aaaggaaaag aaactgatga tgttactcgc aagcgccgtt 1200 ggaatcacat atctatttga ctacgacatc gcagaagccc tagggaattc cctccataaa 1260 ataagtcgct tgtcgtctta tctaatggat gatcatcaag gaatagcctc tcgcatgttt 1320 agcgctactc acggacttca agctggggac aatacggagg atgcagtcac cacaatcatt 1380 agtgatctct tgtctatcac ctttcaaatt gtcgacgaag atgtaactgc tggagtttta 1440 gaagaggtca gcgacacaac tttcagtagt tgggttagcg ttaacactct cgctggaagg 1500 aacatgtcac gccccctgca ataccctgtg aatcagactt acccactcac accaatgaac 1560 gttttgctgc aactccaagc tatggttgat tcggacaatg gttggtcaat ggtcgttgga 1620 cacacgggat ctggaaaatc cacgtatctt cctgtccagt actctaacta ccttgccaag 1680 aaacttgacc gccgccaaca aattctagtt tgcgagccta cgcaagcagc cacagaaaat 1740 gtctgctcag gaattgctgc caacttagga ggagctgtgt atggaagaca tgaaggttgg 1800 tcgcgcatgg gagatcactg cattcaagtt atgacttacg gatcagctct acagtgccac 1860 gcaatggatc caggcttcat atcaaccttt gacgcaatat tccttgatga agctcacgat 1920 gtcaaagagc attcacttgt cttcgaaagc atctgcaaca acttcaagtc tgttagaaag 1980 ttctacgtat cagcaacccc ccgagatggc agttcatgcc cggatgcaac acgcaaattc 2040 cctctaacag ttcagcagag tgtgtgcgat tcatataaga aattcatagc tgcacagggt 2100 ggagatgatc ttctcgacgt cactagatac gacaccgttc ttgtttttct tgctggaaga 2160 ccagaatgcg ttaaagctgc aaatgcatgg aatgctaaca tcactggaga gaagcgagct 2220 ttctcgctat caagcgacaa cttcgccacc gattttgcaa tgctaacgga gcgcctcaaa 2280 acgcacaaaa ccatcatctt cacaacgaac atcatcgaaa ctggtgttac tcttagcgtt 2340 gactgtgttg ttgactttgg ctatactatg cgaccctccc tcgatctaaa ccacaaaaca 2400 ctacgccttg aacgccgtag agtgactgcg aatgagagaa agcaaaggat cggtagagct 2460 gggcgtctca aggagggaca tgccatgtgt gtgggggatg aagatcgatc tgtcaatgtc 2520 gtctcccccg gatgtctgta tgggtgcggg cttcttagct tcaagcacaa tgtgcccttc 2580 tacatgaacg acacctttga aagctcgtgg cttgaaggag ttactaagtc tcaggctgac 2640 actatgacaa ttttcaagct ccccatattc ctaacgcgcg atcttgttaa ctccgacggc 2700 tctgtagcaa aggagtttct tgacattctg aacaagcacc agttcacaac gagcgacatc 2760 aagcaagcgc cacacagcat agctcgtcac ctctttccaa cttgggcctc atactttgca 2820 ctcttccaat caatcaacta cggagaggag aaagacgaga tccccagcaa ccttcgccat 2880 gcgcgagttc ccttctccat ttcaacgctg tctaaattcg actggaatgc cttggcgctt 2940 gcatgtaagc agcatcgccc aacagtggca agctcattcc aaagccttga tcagccagcc 3000 cgcgttgtca ccctacaaac aaactctgca aacatcctcg gaagcatcgc ccatctctgc 3060 aacatgcgta acaattacaa aaccttgatt gacagcaaca accatgtaaa gcaatcaatg 3120 gcaaccaacg tcatgttcaa gtggttctca tcatcccaca tcacagctaa tcttgacagg 3180 aatttatccc gatgcttagc caacttgtca gttgtggaaa ccacgattag cgcgctaaag 3240 cagatttcag ctgaaaactc gcaggtgatg gcttctccaa cacttcagag tcacctagag 3300 aacataatcg gagaactaca atcaaacgat atgttgactg atgaaacatt gtcaaacgct 3360 ctaggcattt tcaacccaaa gaccaacctc ttcctccttc tcgcaactaa aggttttaaa 3420 cttgtctacg ttatctgcct gcttatatta ataaacctca tctaccgctt gctctcccac 3480 tggagagctt ggttgaagaa caagaacgat aacgtgaact ccgatgccct caccaacacc 3540 atgacagttc aggaaggaag cgaaattctc aaggaagtat tgaagatgac tccagcgatg 3600 cgcagggagg tgaccaagga tatgaaagtt gcagttgcag ttgctgataa tgacagcaca 3660 tttctttcgt gtttccctta cgaacacatt gacctcgagg gaaagggaaa ccagtatcga 3720 ccacgagagg acgcacgtct gatgtactcc acgagagacg acgcaacctt cgatacatgg 3780 aacgagaaag ctaaggagaa aaggcagaag atatcagacc gcgcagagcc agagatgaaa 3840 caaccttacc agaagcgtcc atactataac ttctacgacc ttcaaactga tagcaacatt 3900 ctcgaggcaa tattctacac cacggaaggt gacgaattct tccggacggc aaatcccaac 3960 aaggacatgc actcagtagc tgaaaaacta aaagccttcc ttgacacaaa accaatcata 4020 ggcagactcc agcgccagct ccttgaggaa accgctcagg tcgttatcaa agacgacaaa 4080 ggcactgccc acagaatgga catatcaacc cacaacccta acactcttaa gaacaatgga 4140 tcaggaagag ttgggtatga tgagcatcgc ggcgatttca ggcaagaaag ccctgcactt 4200 gagtcaccgt acgagttgga agctgaattt ggaaactcaa aggatgaagt catgcttgaa 4260 gcatcaacag gaattctcct atcccaggtc agcgttgatg ttgcgactcg aattggaaga 4320 ataagcatcg gaacgttcaa tgtcaattgc ttcctctaca gtgattggat actagcacct 4380 gctcattttc aggatcgaaa cggcgccgtc accatcgaat tcccagacca aacggtgagt 4440 accacaaccg acaatttaaa tgcgcacggt gttaagcgat tttacggact tgacctcata 4500 gccattcgga gaccaccaag cctccgacct gagaaaaagc tcgttaaagc gttcgccatc 4560 acagagccag tgatagcaca gatggtcttc attgacagcc aagggatccg aaagttttct 4620 caatccgact ggatcagacg ggaagctggc tctaacagat ggtcacacaa gatctcaact 4680 caaaatggga tgtgtggatg cctgttttgg atgttggaaa gaaccgtctc attgggaatt 4740 cacgttgcca cgaaccgcac cacaggacga aatgaattcc agcccttctc acgcgaggct 4800 gtcgacttca tcaacgggcc aggaaacaag gttcctttca gcccttggac ctttaaccgc 4860 cccgcctgtg gatacaggca aggagaagcc accttcgatt cacgcaccat acagaaccaa 4920 gcctccgaca ctctcagcaa gatcaacaac tccatccttg gctttggaag tgatttgaaa 4980 ggccagcttg ttcaacccgt aacaccagct ctacgcactc gctttgaggc cctgttcggt 5040 ggtggaagct tcgaactcgt cggaacaatg aacaaaggac tcatagacaa acacataatt 5100 gttggggaga acgacaacgt tcatgatttc atgagagagc accccacttt tgcttggctt 5160 cagggtttca tggacgaata cgcaccaagt gtcttgaact actcggctta ctacaaggat 5220 ctttgcaagt acaataggaa gaagcaccaa ctctccttca accctcacga gcttcggagt 5280 gccaccgctg gaatgatcag aatgttggaa gacgccggcc taactcaagg cgacgtgagg 5340 acaccccaac aggttgtttc agacatgcag tggaacactt ccgccggacc aagctaccag 5400 ggcaagaaaa gagacgtttg cgcacatctc agcgagcagg aagttctaca ccttgcagaa 5460 acgtcgcgac acagatttct agcctgcaat tccatcggca tttggaacgg atcgctcaaa 5520 gcagagctta ggacgattga gaaagtagaa gctgagaaaa ccagagtttt cacggcttcg 5580 ccaatcacga gcctattcgc catgaagttc tacgttgacg atttcaacaa gaagttctat 5640 gcgacaaacc tgaaagctcc acacacggta ggaatcaaca aattcagcag aggctgggaa 5700 atgctccacg acaagctcaa ccgcccaggt tggcttcacg gcagtggcga tgggtcacga 5760 ttcgatagtt caattgaccc tttcttcttc gacataatca aggagattcg aaagcacttt 5820 ctaccagttg agcaccatcg cgcaatcgac ctaatatacg acgagattct caacaccaac 5880 atttgtttgg caaatggcat ggtgattcga aagaacgttg ggaataacag cgggcagcca 5940 agcacggtcg tagacaacac acttgttctc atggtctctt ttctctacgc ttacattcat 6000 aaaaccgggg accatatgct caagaaactc aacgacagat ttgttttcgt ctgcaatggt 6060 gacgacaaca aatttgccat ttccccagaa ttcgacgccg agttcggtca cgacttttca 6120 ccggagctca cagagctagg tttgacgtac gagtttgacg acataacaga tgacatctgt 6180 gcaaacccct acatgtccct gaccatggtc cgcactccct ttggaattgg gttctctttg 6240 cccgtggaac gcattgtagc aataatgcag tgggctaaga agggcggcgt tctgcactct 6300 tacttggcag gaatctcagc catttacgaa agcttcaaca caccaaagtt gttcaaatca 6360 gtgtatgcgt atttgttatg gctgacagag gaacacggct ctgacatcct agctgcgatg 6420 accggaacag cgacagctct cccaattccc tccatgctcg atgtgtaccg cctccactat 6480 ggcgatagca gcattgagct ccaagcagct gacacacaaa cagacgcgca gaaggaggaa 6540 gctcgactgg cagccgccac caagaaggca gccgatgatg ccgacgctgc gcgtctccgc 6600 aaggttgaag cagatcgtgt tgaggccgca agagtgaaga aagcgagcga tgacaagaaa 6660 gccagggacc tcacagcaac caaggttgat gatggcaaaa ttgttgccga cgctggaaca 6720 aaaaggacca atgccgccac caaagagaaa tggtcacttc cagaaacaaa acccgtcaac 6780 gcaggactaa agcttcgaat ctcaatggac aaattaaaga gcgcacccaa atctatagtc 6840 gaacacgaca actccgtcgc tctagattca gaagttaaga agtggtcaga cgctgtacgg 6900 acaagtcttg gcatcaccac ggatgaggca tggttcaatg ccctcattcc cttcctcgga 6960 tggtgcgcca acagtggcgc ttcagacaaa cacgcagaaa accagaccat gcaagttgat 7020 aatggaactg gagctttaac cgagatgagt ctctccccat tcattgttca cgctaggttg 7080 aatggtggct tgagacggat cctgcgagcc tacagtgatg aaactttgct tctccttcag 7140 gaacacaaga ttgtcacaaa atgggccatg aaacacggcg catctgcaca cgccgcgtac 7200 gcttttgatt tctttttccc ccgcccgtgg atgaacccac aggacatcga agttgcgaaa 7260 caagcacgtc ttgctgcttt aggcacaggt acatacaata ccatgctcac ctccgacaca 7320 accaacctcc gcaagacaac caaccgcagg gttctggata ctgatggaca cccagaacta 7380 acctaaacca taacccccct ccgcctttta tattttgcac tttaaatttt cgcaaaccat 7440 caccaccttt cacggccacg gttacgatct ttaatttctg cacttgtatc aggctcggga 7500 cggttctatg cacaatatgt cttcgacagt tgccaaacca gtattttcca cgaggaagag 7560 tatggcgagc ttgagcagcc gtttttaatc atacgtcgtt gtatggtggc gcattcagtg 7620 cgtttacgag taccagaagg taat 7644 //