ID AF059533; SV 1; linear; genomic RNA; STD; VRL; 3356 BP. XX AC AF059533; XX DT 16-NOV-1998 (Rel. 57, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 2) XX DE Squash mosaic virus RNA-2 strain Kimble polyprotein 2 gene, complete cds. XX KW . XX OS Squash mosaic virus OC Viruses; Riboviria; Picornavirales; Secoviridae; Comovirinae; Comovirus. XX RN [1] RP 1-3356 RX PUBMED; 9780037. RA Haudenshield J.S., Palukaitis P.F.; RT "Diversity among isolates of squash mosaic virus"; RL J. Gen. Virol. 79(Pt):0(0). XX RN [2] RP 1-3356 RA Haudenshield J.S., Palukaitis P.F.; RT ; RL Submitted (23-MAR-1998) to the INSDC. RL Plant Pathology, Cornell University, 344 Plant Science Bldg, Ithaca, NY RL 14853, USA XX DR MD5; 3353419240fe66241a13ec43eb4ac9da. XX FH Key Location/Qualifiers FH FT source 1..3356 FT /organism="Squash mosaic virus" FT /chromosome="RNA-2" FT /strain="Kimble" FT /mol_type="genomic RNA" FT /db_xref="taxon:12263" FT CDS 203..3232 FT /codon_start=1 FT /product="polyprotein 2" FT /db_xref="GOA:Q9YWJ9" FT /db_xref="InterPro:IPR003181" FT /db_xref="InterPro:IPR003182" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:Q9YWJ9" FT /protein_id="AAC77444.1" FT /translation="MWHFCEQVYECFEGYHRDYSVQTVPVEYLASHYIVNKFRPDPLAV FT LWLFCLGIWWEIIQILHHLFQYKEPALFVGSCQNLAAFLEEKYSMEVIQKEGLAASALK FT DKERLTEKAVVNQPLSNLIPHSNKMYERSKSLLSGLKRGLIKQKEIAFDKLMGGSTIDF FT QHIPTGTLTPGENKVLDIPIVPQHLLTSTNITDYHQANKKNANGATALHVGAIEVIMDC FT FTSPDSNICGGMLLVDTAHLNPDNAIRSVFVAPFIGGRPIRVLLFPDTLVEIAPNMNSR FT FKLLCTTSNGDVAPDFNLAMVKVNVAGCAVSLTKTYTPTAYLEQELIKEKGAIVQYLNR FT HTFSMHRNNQMTKEEMQKQRLSFRLESALTLQEKHPLHATFCKSTNFVYKIGGDAKEGS FT NGNLTVNESQLSSHSPSAHVLHKHNNSGDNEVEFSEIGVVVPGAGRTKAYGQNELDLAQ FT LSLDDTSSLRGTALQTKLATSRIILSKTMVGNTVLREDLLATFLQDSNERAAIDLIRTH FT VIRGKIRCVASINVPENTGCALAICFNSGITGAADTDIYTTSSQDAIVWNPACEKAVEL FT TFNPNPCGDAWNFVFLQQTKAHFAVQCVTGWTTTPLTDLALVLTWHIDRSLCVPKTLTI FT SSAHASFPINRWMGKLSFPQGPARVLKRMPLAIGGGAGTKDAILMNMPNAVISLHRYFR FT GDFVFEITKMSSPYIKATIAFFIAFGDITEEMTNLESFPHKLVQFAEIQGRTTITFTQS FT EFLTAWSTQVLSTVDPQKDGCPHLYALLHDSATSTIEGNFVIGVKLLDIRNYRAYGHNP FT GFEGARLLGISGQSTMVQQLGTYNPIWMVRTPLESTAQQNFASFTADLMESTISGDSTG FT NWNITVYPSPIANLLKVAAWKKGTIRFQLICRGAAVKQSDWAASARIDLINNLSNKALP FT ARSWYITKPRGGDIEFDLEIAGPNNGFEMANSSWAFQTTWYLEIAIDNPKQFTLFELNA FT CLMEDFEVAGNTLNPPILLS" XX SQ Sequence 3356 BP; 895 A; 692 C; 742 G; 1027 T; 0 other; aaaaattttt aataaccgtc ttcttgggat caaaggatcc ccacccaaag tgttctttaa 60 aagtgatctt ctgctccctc ttcgcacttt acggcttcgg tagactgtgc caagagtttt 120 ctccctcttt ctcttctttc cttaaccctt ttaagatttc agccaaatgt atgcatttgc 180 ttaattcaat taatttgcat tcatgtggca tttctgcgaa caagtttacg agtgttttga 240 gggttaccat agagactact ctgttcaaac ggtccccgtg gaatacttag cctcacacta 300 tattgtcaac aagtttagac ccgaccctct agctgttttg tggcttttct gtttggggat 360 ttggtgggag attattcaga tactccatca tctatttcag tataaggaac cagcactttt 420 tgttggcagt tgtcaaaatc ttgctgcttt tttagaggaa aagtactcca tggaagtgat 480 tcaaaaggaa ggcttggctg cttcggcact caaggacaag gagcgattga ccgaaaaagc 540 tgtggtcaat caacccctga gtaatttaat tccccattcg aataaaatgt atgagcgaag 600 taagagtctc ctatctggtc ttaagcgtgg tttgataaag caaaaagaga tagcttttga 660 caagctcatg ggaggttcaa caattgattt ccagcatatc ccaacaggaa ctctcacacc 720 tggtgagaac aaagtgctag acataccaat tgttccacag catttgttga ctagtacaaa 780 tataacagat taccaccagg ctaacaagaa aaatgctaat ggtgctactg cactccatgt 840 tggggctata gaggtcatta tggattgctt cacctctcct gatagtaata tttgtggtgg 900 catgctgttg gttgatacag cacatctaaa tccggataat gccataagaa gcgtgttcgt 960 tgcgccattt ataggtggtc gtcctattcg agttttgcta tttccagaca ccttggtgga 1020 gattgccccg aacatgaact cccgattcaa attgctatgt actacgagta acggcgatgt 1080 tgcaccagat tttaatttgg cgatggtcaa agtcaacgtt gcaggttgtg ctgttagttt 1140 gactaagaca tacactccta cagcttatct cgagcaagag ttaatcaaag aaaagggggc 1200 cattgtccaa tatttgaaca ggcacacctt ctctatgcat cggaacaatc agatgacaaa 1260 ggaagagatg caaaagcagc gcctatcttt tagattggaa agtgctctca ctttgcagga 1320 aaagcatcct ttgcacgcca ctttctgcaa atcaactaac tttgtttaca agattggtgg 1380 ggatgcaaaa gagggcagca atggcaatct aactgttaat gaaagccaat tgtcctcaca 1440 ctctccttct gcacatgttt tgcacaagca caacaacagt ggtgacaatg aagtagagtt 1500 ctcagaaatt ggtgtagttg taccaggtgc tggcagaacc aaggcttatg gccaaaatga 1560 gctagatctt gcgcaacttt ctctggacga caccagttct cttcgtggaa ctgcgttgca 1620 gaccaaactg gccacgtccc gtatcatttt gagtaagaca atggttggaa atactgtgct 1680 cagggaggat ttgcttgcca cctttttgca agatagcaat gagagggccg ctatagattt 1740 gattcgcacc catgtcatta gaggcaaaat acgctgtgtt gcttctatca atgttccaga 1800 aaatacaggt tgtgcattag ctatctgttt caacagtggc ataacaggag ctgcagatac 1860 agacatttat accacaagtt ctcaggatgc cattgtgtgg aatcctgctt gcgagaaagc 1920 tgttgagttg acattcaacc ccaatccttg tggtgatgct tggaattttg tgtttctgca 1980 acaaacaaag gcacattttg ccgttcagtg tgtgaccggg tggactacaa cgccacttac 2040 agatttagcg ttggtgctta catggcacat tgatagaagc ttgtgtgtgc ccaaaacttt 2100 gacaattagc tctgcacatg cttcttttcc aataaatcgt tggatgggaa agttgtcctt 2160 tccgcaaggg cctgcgcgtg ttcttaagag gatgcccttg gccattggtg gcggggctgg 2220 taccaaagat gctatcttga tgaatatgcc aaacgctgtt atttcacttc atcgatattt 2280 tagaggggat tttgtctttg aaataacaaa gatgagttct ccttatatca aggcaaccat 2340 tgctttcttt atagcgtttg gtgatattac ggaggaaatg actaacttgg agagttttcc 2400 ccacaagctt gtgcagtttg ctgaaattca ggggcgcact accataacgt tcacgcaaag 2460 cgaatttttg acggcatggt ctacacaagt attaagcact gttgatcctc agaaagatgg 2520 gtgtccccac ttgtatgcac tcttgcacga ttctgctacg tcaaccattg aaggaaattt 2580 tgtcattggt gttaaattgc tggatattag gaactatcgt gcttacggcc ataaccctgg 2640 ttttgaggga gctcgcttac taggaatttc tgggcagagt accatggtac agcagcttgg 2700 aacttataat ccaatctgga tggttcgtac gcccttagaa agtacagccc aacagaattt 2760 tgcgagtttc actgctgatt tgatggaatc cacgataagt ggggactcta ccggaaattg 2820 gaatattaca gtttacccga gtcctatagc taatttattg aaagtggctg cttggaagaa 2880 agggactata agatttcaac ttatttgtcg gggtgctgct gttaagcagt ctgactgggc 2940 tgcgtcagct agaatagact tgattaacaa cctctcgaac aaagctttac ccgcacgttc 3000 ctggtacatt actaagccac gaggaggcga catcgagttt gacttagaga tagcgggacc 3060 aaacaatggt ttcgaaatgg cgaactccag ttgggctttc cagaccacat ggtatttgga 3120 aattgccata gacaatccta agcaattcac tctttttgag ttaaatgctt gtcttatgga 3180 agactttgaa gtggctggaa atactttaaa tccacctatt ttgctttcat agttgtttcg 3240 ttgtttgttt ccttcttttc tgggttttgt tgtggcttct ttcccagttc gctttagaag 3300 cctctctttg taaattttaa gagcttgttt tctttgatgc attctctttt cttttt 3356 //