ID AF046996; SV 1; circular; genomic DNA; STD; VRL; 3179 BP. XX AC AF046996; XX DT 22-MAY-1998 (Rel. 55, Created) DT 03-MAR-2000 (Rel. 62, Last updated, Version 2) XX DE Woolly monkey hepatitis B Virus, complete genome. XX KW . XX OS Woolly monkey hepatitis B virus OC Viruses; Hepadnaviridae; Orthohepadnavirus. XX RN [1] RP 1-3179 RX DOI; 10.1073/pnas.95.10.5757. RX PUBMED; 9576957. RA Lanford R.E., Chavez D., Brasky K.M., Burns R.B.III., Rico-Hesse R.; RT "Isolation of a hepadnavirus from the woolly monkey, a New World primate"; RL Proc. Natl. Acad. Sci. U.S.A. 95(10):5757-5761(1998). XX RN [2] RP 1-3179 RA Lanford R.E., Chavez D., Burns R., Brasky K.M., Rico-Hesse R.; RT ; RL Submitted (05-FEB-1998) to the INSDC. RL Virology and Immunology, Southwest Foundation for Biomedical Research, 7620 RL N.W. Loop 410, San Antonio, TX 78227, USA XX DR MD5; 03a2a66ea29d305bd62584a4c628eaba. DR EuropePMC; PMC104317; 10438880. DR EuropePMC; PMC111792; 10684318. DR EuropePMC; PMC111941; 10756039. DR EuropePMC; PMC161928; 12829821. DR EuropePMC; PMC20452; 9576957. DR EuropePMC; PMC2894418; 17506609. DR EuropePMC; PMC2913959; 20633273. DR EuropePMC; PMC3374772; 22720022. DR EuropePMC; PMC3647427; 23631923. DR EuropePMC; PMC371212; 15013993. DR EuropePMC; PMC3901648; 24475029. DR EuropePMC; PMC4269919; 25495746. DR EuropePMC; PMC427827; 15184419. DR EuropePMC; PMC4980030; 27508385. DR EuropePMC; PMC5011399; 27630726. DR EuropePMC; PMC5320732; 28222808. DR EuropePMC; PMC5990914; 29910854. DR GOA; P0C6J0. DR InterPro; IPR013195; Hepatitis_B_virus_capsid_N. DR RFAM; RF01047; HBV_epsilon. DR UniProtKB/Swiss-Prot; P0C6J0; HBEAG_WMHBV. XX FH Key Location/Qualifiers FH FT source 1..3179 FT /organism="Woolly monkey hepatitis B virus" FT /host="Lagothrix lagotricha" FT /mol_type="genomic DNA" FT /db_xref="taxon:68416" FT CDS join(2309..3179,1..1637) FT /codon_start=1 FT /product="polymerase" FT /note="reverse transcriptase" FT /db_xref="GOA:O71304" FT /db_xref="InterPro:IPR000201" FT /db_xref="InterPro:IPR000477" FT /db_xref="InterPro:IPR001462" FT /db_xref="InterPro:IPR037531" FT /db_xref="UniProtKB/Swiss-Prot:O71304" FT /protein_id="AAC16908.1" FT /translation="MPLSYQHFRKLLLLDEGDPLEDALPRLADEDLNRRVAEGLNLQHL FT PVSIPWTHKVGPFSGLYSVSTLTFNPQWKTPQFPLIHLKEDLIPFIESYFGPLTSNEKR FT RLKLVLPARFYPKATKYFPLEKGIKPHYPNDVVNHYYQVQHYLHTLWEAGVLYKRETTH FT SASFFGTPYTWEHKLQHGTQPVNVQPAGILSQSSAGPPVQGQCRLSRLGQKSKQGPLAT FT SPRHGSGGLWSRTSATPWRPSGVEFTSSGFVCHSARHPSSSINQSRQRKETNTSYSSSE FT RHSPTSHDLEHVLLPELSSESKGQRPLLSCWWLNFKHCQPCSDHCLHHIVKLLDDWGPC FT QHHGHHFIRIPRTPSRITGGVFLVDKNPHNATESRLVVDFSQFSRGNTSVSWPKFAVPN FT LQSLTNLLSTDLSWVSLDVFAAFYHLPLHPASMPHLLVGSSGLPRYVARVSSSTNSYRN FT NNNNGTLQDLHANCSRHLFVSLMLLYQTYGRKLHLYSHPLIMGFRKVPMGLGLSPFLLA FT QFTSAICSVVRRAFPHCMAFSYMDDVVLGAKSVQHLESLLASVTTFLLALGIHLNPEKT FT KRWGKALNFMGYVIGGYGSLPQQHIRDKIALCFQKLPCNRPIDWKVCQRIVGLLGFVAP FT FTQCGYAALMPIYTCIQKHQAFTFSLVYKTFLKDQYMHLYPVARQRAGHCQVFADATPT FT GWGLVMGNQRMRGTFLSPLPIHTAELLAACFARCWSGAKLIGTDNAVVLSRKYTHFPWL FT LGCAATWILRGTCFVYVPSKLNPADDPSRGCLGLLKPLPRLLFQPSTGRTSLYAVSPPV FT PFHRPGRVLFASPLQPGDAWRPP" FT CDS join(2847..3179,1..843) FT /codon_start=1 FT /product="preS1 surface protein" FT /note="envelope protein" FT /db_xref="GOA:O71305" FT /db_xref="InterPro:IPR000349" FT /db_xref="UniProtKB/Swiss-Prot:O71305" FT /protein_id="AAC16905.1" FT /translation="MGLNQSTFNPLGFFPSHQLDPLFKANAGSADWDKNPNKDPWPQAH FT DTAVGAFGPGLVPPHGGLLGWSSQAQGLSVTVPDTPPPPSTNRDKGRKPTPATPPLRDT FT HPQAMTWNTSSFQSYLQNPKVRGLYFPAGGSTSSIVNPVPTTASTTSSSFSTTGVPVST FT MDITSSGFLGPLLALQAVFFLLTKILTMPQSLDSLWTSLNFLGGTPACPGLNSQSPTSS FT HSPTCCPPTCPGYRWMCLRRSIIFLFILLLCLIFLLVLLDYQGMLPVCPLLPTVTGTTT FT TTGPCRTCTPIVPGISSYPSCCCTKPTDGNCTCIPIPSSWAFAKFLWDWALARFSWLNS FT LLPFVQWFAGLSPTVWLLVIWMMWFWGPSLFSILSPFLPLLPLFFWLWAYI" FT CDS 157..843 FT /codon_start=1 FT /product="surface protein" FT /note="envelope protein" FT /db_xref="GOA:O71305" FT /db_xref="InterPro:IPR000349" FT /db_xref="UniProtKB/Swiss-Prot:O71305" FT /protein_id="AAC16906.1" FT /translation="MDITSSGFLGPLLALQAVFFLLTKILTMPQSLDSLWTSLNFLGGT FT PACPGLNSQSPTSSHSPTCCPPTCPGYRWMCLRRSIIFLFILLLCLIFLLVLLDYQGML FT PVCPLLPTVTGTTTTTGPCRTCTPIVPGISSYPSCCCTKPTDGNCTCIPIPSSWAFAKF FT LWDWALARFSWLNSLLPFVQWFAGLSPTVWLLVIWMMWFWGPSLFSILSPFLPLLPLFF FT WLWAYI" FT CDS 1382..1840 FT /codon_start=1 FT /product="X protein" FT /note="transactivator" FT /db_xref="GOA:O71302" FT /db_xref="InterPro:IPR000236" FT /db_xref="UniProtKB/Swiss-Prot:O71302" FT /protein_id="AAC16907.1" FT /translation="MAARLCCYLDPERDVLCLRPLQAEPSGRPFSGLSRPAETAAAAAV FT PAFHGAHLSLRGLPSCAFSSAGPCALRFTSATWRCMETPMNSVTCLRKRTLGLRTAPPT FT VMEQYIKDCLFEQWEEQGEEPRLKVFVLGGCRHKLVGTASPCIFFTSA" FT CDS 1903..2451 FT /codon_start=1 FT /product="core protein" FT /note="nucleocapsid protein" FT /db_xref="GOA:O71303" FT /db_xref="InterPro:IPR002006" FT /db_xref="InterPro:IPR036459" FT /db_xref="UniProtKB/Swiss-Prot:O71303" FT /protein_id="AAC16904.1" FT /translation="MDIDPYKEFGATVELLSFLPADFFPSVRDLLDTASALYREALESS FT DHCSPHHTALRQTVLCWGELMSLASWVGTNLEDPAARELVVSYVNDNMGLKVRQLLWFH FT ISCLTFGRETVLEYLVSFWVWIRTPPAYRPPNAPILSTLPETTVVRRRRPSGRRTPSPR FT RRRSQSPRRRRSQSPASSC" XX SQ Sequence 3179 BP; 713 A; 865 C; 701 G; 900 T; 0 other; aacacgtcct ccttccagag ttatcttcag aatccaaagg tcagaggcct ctactttcct 60 gctggtggct caacttcaag cattgtcaac cctgttccga ccactgcctc caccacatcg 120 tcaagcttct cgacgactgg ggtccctgtc agcaccatgg acatcacttc atcaggattc 180 ctaggacccc ttctcgcatt acaggcggtg tttttcttgt tgacaaaaat cctcacaatg 240 ccacagagtc tagactcgtt gtggacttct ctcaattttc tagggggaac accagcgtgt 300 cctggcctaa attcgcagtc cccaacctcc agtcactcac caacctgctg tccaccgact 360 tgtcctgggt atcgctggat gtgtttgcgg cgttctatca tcttcctctt catcctgctt 420 ctatgcctca tcttcttgtt ggttcttctg gactaccaag gtatgttgcc cgtgtgtcct 480 cttctaccaa cagttacagg aacaacaaca acaacgggac cctgcaggac ctgcacgcca 540 attgttccag gcatctcttc gtatccctca tgttgctgta ccaaacctac ggacggaaac 600 tgcacttgta ttcccatccc ctcatcatgg gctttcgcaa agttcctatg ggactgggcc 660 ttagcccgtt tctcctggct caattcactt ctgccatttg ttcagtggtt cgcagggctt 720 tcccccactg tatggctttt agttatatgg atgatgtggt tctgggggcc aagtctgttc 780 agcatcttga gtcccttctt gcctctgtta ccacttttct tttggctttg ggcatacatt 840 tgaaccctga aaagaccaaa agatggggaa aagccttaaa ttttatggga tatgtcattg 900 gagggtatgg ttctcttccc caacaacata ttagagataa gattgctttg tgcttccaga 960 aattaccatg taatcgacct attgattgga aagtctgtca gagaattgtt ggtttattgg 1020 gctttgttgc tccctttaca caatgtggat acgctgcttt aatgcctata tatacatgca 1080 tccaaaaaca tcaggccttt actttctctc ttgtgtacaa gacctttttg aaagatcaat 1140 acatgcacct ttaccccgtt gctaggcaac gagctgggca ctgccaagtg tttgctgacg 1200 caacccccac tggctggggc ttggtcatgg gcaatcagcg catgcgtggt acatttttgt 1260 ccccgctgcc tatccatact gcggaactcc ttgcagcctg ttttgctcgc tgctggtcag 1320 gggcaaaact catcggcact gacaacgctg ttgtgctgtc tcggaagtat acacacttcc 1380 catggctgct aggctgtgct gctacctgga tcctgagagg gacgtgcttt gtttacgtcc 1440 cctccaagct gaacccagcg gacgaccctt ctcggggttg tctcggcctg ctgaaaccgc 1500 tgccgcggct gctgttccag ccttccacgg ggcgcacctc tctctacgcg gtctcccctc 1560 ctgtgccttt tcatcggccg ggccgtgtgc tcttcgcttc acctctgcaa cctggagatg 1620 catggagacc cccatgaact ctgtcacctg cctgcgtaag aggacccttg gactccgcac 1680 tgcaccacct accgtgatgg agcaatacat caaagactgt ttgtttgaac agtgggaaga 1740 acaaggggag gagcctaggt taaaggtctt tgtattagga ggctgtaggc ataaattggt 1800 gggaactgcc tcaccatgca tctttttcac ctctgcctga tcatcttatg ttcatgtcct 1860 actgttcaag cctccaagct gtgccttggg tggcttttgg gcatggacat tgatccttat 1920 aaagaatttg gcgctactgt tgagttattg tcttttttgc ctgctgactt ctttccttcc 1980 gtacgggatt tgctggacac agcttctgct ctgtatagag aagccctgga gtcttccgac 2040 cactgttcac cgcaccatac tgccttgagg cagacggtac tgtgctgggg agaattaatg 2100 tccttagctt cttgggtggg aactaatttg gaggatcctg ctgctagaga attagtggtt 2160 agctatgtca atgacaacat gggactgaag gtgagacaac tcctttggtt ccatatttcc 2220 tgtctcactt ttggtaggga aactgttttg gaatatctgg tttctttttg ggtgtggata 2280 cgcacacctc ctgcatatag accacccaat gcccctatct tatcaacact tccggaaact 2340 actgttgtta gacgaaggag accctctgga agacgcactc cctcgcctcg cagacgaaga 2400 tctcaatcgc cgcgtcgcag aaggtctcaa tctccagcat cttcctgtta gtataccttg 2460 gactcataag gtggggccat tctcgggttt gtattctgtt tccactctca cattcaatcc 2520 acaatggaaa actccccaat ttcctttgat tcaccttaag gaagatttaa ttccttttat 2580 agagtcatat tttggccctc taactagcaa tgaaaaaagg agactcaaat tggttttacc 2640 agctagattt tatccaaagg ctaccaaata tttcccactg gagaaaggga ttaaacctca 2700 ttatcctaat gatgtagtta atcattatta ccaagttcag cattatttac ataccctttg 2760 ggaggcggga gtcttatata aaagagagac aactcacagt gcctcattct ttgggacacc 2820 gtacacttgg gaacataagc tacagcatgg gactcaacca gtcaacgttc aacccgctgg 2880 gattctttcc cagtcatcag ctggaccccc tgttcaaggc caatgcaggc tcagcagatt 2940 gggacaaaaa tccaaacaag gacccttggc cacaagccca cgacacggca gtgggggcct 3000 ttggtccagg actagtgcca ccccatggag gccttctggg gtggagttca caagctcagg 3060 gtttgtctgt cacagtgcca gacacccctc ctcctccatc aaccaatcgc gacaaaggaa 3120 ggaaaccaac accagctact cctcctctga gagacactca cccacaagcc atgacctgg 3179 //