ID   AF039909; SV 1; circular; other RNA; STD; VRL; 220 BP.
XX
AC   AF039909;
XX
DT   13-JAN-1998 (Rel. 54, Created)
DT   16-SEP-2003 (Rel. 77, Last updated, Version 4)
XX
DE   RYMV small circular viroid-like RNA hammerhead ribozyme.
XX
KW   .
XX
OS   Rice yellow mottle virus satellite
OC   Viruses; Satellites; RNA satellites; Single stranded RNA satellites;
OC   Circular single stranded RNA satellites.
XX
RN   [1]
RP   1-220
RX   DOI; 10.1006/viro.1997.8962.
RX   PUBMED; 9499801.
RA   Collins R.F., Gellatly D.L., Sehgal O.P., Abouhaidar M.G.;
RT   "Self-cleaving circular RNA associated with rice yellow mottle virus is the
RT   smallest viroid-like RNA";
RL   Virology 241(2):269-275(1998).
XX
RN   [2]
RP   1-220
RA   Collins R.F., Gellatly D.L., Sehgal O.P., Abouhaidar M.G.;
RT   ;
RL   Submitted (24-DEC-1997) to the INSDC.
RL   Botany, Univ. of Toronto, 25 Willcocks St., Toronto, Ont. M5S 3B2, Canada
XX
DR   MD5; fcc6ebad22542ccca0a27aa5581319d4.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..220
FT                   /organism="Rice yellow mottle virus satellite"
FT                   /isolate="RYMV-I; RYMV-K"
FT                   /mol_type="other RNA"
FT                   /note="full name: small circular viroid-like RNA associated
FT                   with rice yellow mottle virus"
FT                   /db_xref="taxon:195056"
FT   misc_RNA        1..220
FT                   /note="possibly translated as a dimer; similar to sat-RNA
FT                   of lucerne transient streak sobemovirus (sat-LTSV)"
FT   misc_RNA        join(164..179,43..55)
FT                   /product="hammerhead ribozyme"
FT                   /note="similar to hammerhead ribozyme of newt and sat-RNA
FT                   of carnation small viroid-like RNA"
FT   misc_feature    177^178
FT                   /note="self-cleavage on (+) sense polarity"
XX
SQ   Sequence 220 BP; 41 A; 63 C; 77 G; 39 T; 0 other;
     ccagctgcgc agggggcgga gattttgttt cgagccttac cgacactgat gagccaagag        60
     gaacttggag gcacccagga atttcacccg ggtcgacctg ggcggctagg agccgtgcac       120
     agggcgtcgc tgtggagcga gcctggcctc caaggggcct ggaggcgaaa ccggtctgtt       180
     gggaccactc ggaccatcag tcatcgtgct ccggcagctt                             220
//