ID   AF039529; SV 1; circular; genomic DNA; STD; VRL; 2707 BP.
XX
AC   AF039529;
XX
DT   29-DEC-1998 (Rel. 58, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 4)
XX
DE   Sugarcane streak Egypt virus - [Ben], complete genome.
XX
KW   .
XX
OS   Sugarcane streak Egypt virus - [Ben]
OC   Viruses; Geminiviridae; Mastrevirus.
XX
RN   [1]
RP   1-2707
RX   DOI; 10.1007/s007050050647.
RX   PUBMED; 10664387.
RA   Bigarre L., Salah M., Granier M., Frutos R., Thouvenel J., Peterschmitt M.;
RT   "Nucleotide sequence evidence for three distinct sugarcane streak
RT   mastreviruses";
RL   Arch. Virol. 144(12):2331-2344(1999).
XX
RN   [2]
RP   1-2707
RA   Bigarre L., Salah M., Granier M., Nicole M., Peterschmitt M.,
RA   Thouvenel J.C.;
RT   ;
RL   Submitted (22-DEC-1997) to the INSDC.
RL   CA-phyma, CIRAD, BP 5035, Montpellier 34080, France
XX
DR   MD5; bcf634a861d5e84db2a1b214c76a9014.
DR   EuropePMC; PMC1262190; 16244707.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2707
FT                   /organism="Sugarcane streak Egypt virus - [Ben]"
FT                   /strain="Beni-Suef"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:268784"
FT   misc_feature    join(2557..2707,1..131)
FT                   /note="long intergenic region (LIR)"
FT   gene            132..449
FT                   /gene="V1"
FT   CDS             132..449
FT                   /codon_start=1
FT                   /gene="V1"
FT                   /product="putative movement protein"
FT                   /note="MP"
FT                   /db_xref="GOA:Q9YXD8"
FT                   /db_xref="InterPro:IPR002621"
FT                   /db_xref="UniProtKB/TrEMBL:Q9YXD8"
FT                   /protein_id="AAC98080.1"
FT                   /translation="MDGSGGALPALPQSVLPRVPSPPPSAGVLPWSRVGEILIFTFVAL
FT                   VALYLLWLWVLRDLIFLVKARRGISTEEVSFGTSDLVGSQAPTPVGVSASCPPGPVPFT
FT                   A"
FT   gene            466..1209
FT                   /gene="V2"
FT                   /note="synonym: CP"
FT   CDS             466..1209
FT                   /codon_start=1
FT                   /gene="V2"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q9YXD7"
FT                   /db_xref="InterPro:IPR000143"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="UniProtKB/TrEMBL:Q9YXD7"
FT                   /protein_id="AAC98081.1"
FT                   /translation="MPLAGSKRKRADEVAWSKRGTKKKPERTSAARAGPSRRIRPPLQI
FT                   ATFVAAGQSLVSVPSGGVCELLGSYARGADEANRHTNETVTYKVALDYHFVATAAACKY
FT                   SSIGTGVAWLVYDAQPTGNTPTTKDIFGYSDSLVAFPYTWKVSREVCHRFVVKRRCTFT
FT                   METDGRIGSDVPPANTSWSPCKRAIYFHKFFTGLGVKTEWKNLTDGGVGAIKKGALYLV
FT                   IAPGNGLEFTCHGQARLYFKSVGNQ"
FT   misc_feature    1208..1405
FT                   /note="small intergenic region (SIR)"
FT   gene            complement(1406..>1816)
FT                   /gene="C2"
FT   CDS             complement(1409..>1816)
FT                   /codon_start=1
FT                   /gene="C2"
FT                   /product="RepB"
FT                   /db_xref="UniProtKB/TrEMBL:Q77Y11"
FT                   /protein_id="AAC98083.1"
FT                   /translation="RIQNIPGHRKQSLYILGPTRTGKSTWARSLGRHNYWQNNVDWSSY
FT                   DEEAVYNIIDDIPFKFCPCWKQLVGCQKEYVVNPKYGKKKKVASRSIPSIILANEDEDW
FT                   LTVMTPGQREYFEANAVIYIMTAGEKFYKPA"
FT   gene            complement(1726..2556)
FT                   /gene="C1"
FT   CDS             complement(1726..2556)
FT                   /codon_start=1
FT                   /gene="C1"
FT                   /product="RepA"
FT                   /db_xref="GOA:Q9YXD6"
FT                   /db_xref="InterPro:IPR001146"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:Q9YXD6"
FT                   /protein_id="AAC98082.1"
FT                   /translation="MTTVGSTESGSASRSFKHRNVNTFLTYSKCHLDPEAVGLHLWSLI
FT                   GHWNPAYIVVSREAHADGSWHIHALAQSVKPVQTTNPRFFDIEDFHPNIQSAKSADRVK
FT                   EYVLKNPIKQWEKGTFIPRKKSFATTSSEDRQPKPTKDDIVRDIIEHSTSKQEYLSMLQ
FT                   KALPYEWATKLQYFEYSASRLFPETAEVYTNPHPPTEPDLVNFETIEDWLNPNIYQVSP
FT                   EAYMLLTPTCLTLEEAISDLEWMQSASRTSQGTGNSLCTSWGQQEQGNQPGPEA"
XX
SQ   Sequence 2707 BP; 561 A; 659 C; 761 G; 726 T; 0 other;
     accgcgctct ctcatgcgag gcccaccagg ccgagcggtc ctgctttggg gccctatgtc        60
     tttcgttaaa gcctgtatgt aattaggcgc tttggatcgc atataagttc gtgcccaggc       120
     tcagtggtgc tatggacggc tctggaggag cgttgcctgc tttgcctcaa agtgttctgc       180
     cgcgggtacc ctcgccacct ccgtctgccg gagtgctgcc gtggagtcgc gtcggtgaga       240
     tattgatttt cacctttgtt gctttggtag ctctgtacct gttatggttg tgggtgctga       300
     gagatcttat cttccttgtt aaggctcgcc gcgggatctc aacggaggag gtgagctttg       360
     gtacgtcaga tctggttggt tcgcaggctc caacgccggt cggtgtctct gctagctgtc       420
     cgccgggacc tgtgccgttc acggcctagg tagccctcag ccaccatgcc tcttgccggc       480
     agcaaaagga agagggccga tgaggtggcc tggtctaagc gtggcactaa gaagaagcct       540
     gagcgtacat ctgccgctcg ggctggtccg tctaggcgga ttcgtccacc cctgcagata       600
     gccacgtttg tggcagccgg tcagtctctg gtgtctgtcc cttccggtgg tgtttgtgaa       660
     ctgctgggct cctatgctcg aggcgctgac gaggccaacc gtcacaccaa cgagactgtc       720
     acgtacaagg ttgccttgga ctaccacttc gttgctactg cagccgcctg caagtattct       780
     agcattggca ctggcgtggc ctggttggtg tatgatgcac agcctaccgg aaataccccg       840
     acgacgaagg acatcttcgg ctatagtgac tcccttgtgg cgttccccta cacatggaag       900
     gtttcaaggg aggtgtgtca tcgcttcgtg gtgaagagga gatgcacttt cacgatggag       960
     accgacggtc ggattgggtc ggatgttcct ccggcgaata cctcatggtc gccttgtaag      1020
     cgggcgattt acttccataa gttcttcacc ggcctgggtg tgaagacgga gtggaagaat      1080
     ctcacagacg gtggtgtggg agcgattaag aagggtgcgt tgtacctggt cattgcccct      1140
     ggcaacggtc tagagtttac ctgccatggg caggcccgtc tgtacttcaa atcagttggg      1200
     aatcagtgat tccctacaga ataataaaac aagttttata attccattga tattggacgc      1260
     agtacaatac agaatacaat gtctgcagat gtgcagacga caacattaaa ctggttttgt      1320
     gtgtcgcgag ggggaacccg gagcacgctc ccaaaacacc caacacacac acacccaact      1380
     gaagtttatt gaacatgcag ccgccggcct aagcaggctt gtagaacttc tcgcctgctg      1440
     tcataatgta tatgaccgcg tttgcctcga agtactcccg ctgtccggga gtcatgaccg      1500
     tcagccagtc ctcatcctcg ttggctagga ttattgatgg aatgctcctg gaagctacct      1560
     tcttcttctt accgtacttc gggttgacga cgtactcttt ctggcagcca accagctgct      1620
     tccagcaagg acagaacttg aaggggatat catctatgat gttgtagact gcttcctcat      1680
     cataggaaga ccagtccaca ttattctgcc agtagttgtg gcgccctagg cttctggccc      1740
     aggttgattt ccctgttctt gttggcccca ggatgtacag agactgtttc ctgtgccctg      1800
     ggatgttctg gatgcggatt gcatccattc taagtcagag attgcttcct caagggttaa      1860
     gcaggtagga gtaagcagca tgtaggcttc tggactaacc tgatagatgt tggggttgag      1920
     ccaatcttct atggtttcga agtttacgag gtccggttca gtgggaggat gaggattggt      1980
     gtatacttct gcagtttcag ggaacaatct ggaggctgag tactcaaagt actggagctt      2040
     cgttgcccac tcgtagggga gtgccttctg aagcattgaa aggtactctt gcttggaggt      2100
     ggagtgttcg atgatatctc tcacgatatc atcttttgtg ggtttaggtt gcctatcctc      2160
     agatgaagtg gtagcaaatg atttcttgcg tgggatgaaa gtacctttct cccactgttt      2220
     gatcgggttt ttgagcacgt attccttgac cctgtctgcg gacttggcac tctgaatgtt      2280
     aggatggaaa tcctcaatgt caaagaacct agggttcgta gtttgcacag gcttgacgct      2340
     ctgagctaag gcatggatat gccaggatcc atcagcatga gcttcccggc tcacgacgat      2400
     gtacgctgga ttccagtgac ctatgagact ccagagatgg agcccaacag cttcagggtc      2460
     tagatggcac ttggaatatg tgaggaatgt gtttacgttc ctgtgcttga aggaacggct      2520
     ggcagagcct gactctgttg atcctacggt tgtcatggct gggcgagagg tctgattctg      2580
     agtctcaact aactctccta caggtttgcg aatcgaaatc cgacctcccg tcttatatag      2640
     gagcttagtt gggccgggcc ggaaattttt tctgggccgc aatgagagag cgcaaaccga      2700
     taatatt                                                                2707
//