ID   AF039528; SV 1; circular; genomic DNA; STD; VRL; 2707 BP.
XX
AC   AF039528;
XX
DT   29-DEC-1998 (Rel. 58, Created)
DT   15-APR-2005 (Rel. 83, Last updated, Version 4)
XX
DE   Sugarcane streak Egypt virus - [Aswan], complete genome.
XX
KW   .
XX
OS   Sugarcane streak Egypt virus - [Aswan]
OC   Viruses; Geminiviridae; Mastrevirus.
XX
RN   [1]
RP   1-2707
RX   DOI; 10.1007/s007050050647.
RX   PUBMED; 10664387.
RA   Bigarre L., Salah M., Granier M., Frutos R., Thouvenel J., Peterschmitt M.;
RT   "Nucleotide sequence evidence for three distinct sugarcane streak
RT   mastreviruses";
RL   Arch. Virol. 144(12):2331-2344(1999).
XX
RN   [2]
RP   1-2707
RA   Bigarre L., Salah M., Granier M., Nicole M., Peterschmitt M.,
RA   Thouvenel J.C.;
RT   ;
RL   Submitted (22-DEC-1997) to the INSDC.
RL   CA-phyma, CIRAD, BP 5035, Montpellier 34080, France
XX
DR   MD5; 99f6c2306eded7d43cb0afdd99c98dba.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2707
FT                   /organism="Sugarcane streak Egypt virus - [Aswan]"
FT                   /strain="Aswan"
FT                   /mol_type="genomic DNA"
FT                   /db_xref="taxon:268783"
FT   misc_feature    join(2558..2707,1..132)
FT                   /note="long intergenic region (LIR)"
FT   gene            133..450
FT                   /gene="V1"
FT   CDS             133..450
FT                   /codon_start=1
FT                   /gene="V1"
FT                   /product="putative movement protein"
FT                   /note="MP"
FT                   /db_xref="GOA:Q9YXE2"
FT                   /db_xref="InterPro:IPR002621"
FT                   /db_xref="UniProtKB/TrEMBL:Q9YXE2"
FT                   /protein_id="AAC98076.1"
FT                   /translation="MDGSGGALPALPQSVLPRVPSPPPSAGVLPWSRVGEIVIFTFVAL
FT                   IALYLLWLWVLRDLIFLVKARRGISTEEVSFGTSDLVVSQAPTPVGVSASCPPGPVPFT
FT                   A"
FT   gene            467..1210
FT                   /gene="V2"
FT                   /note="synonym: CP"
FT   CDS             467..1210
FT                   /codon_start=1
FT                   /gene="V2"
FT                   /product="coat protein"
FT                   /db_xref="GOA:Q9YXE1"
FT                   /db_xref="InterPro:IPR000143"
FT                   /db_xref="InterPro:IPR000263"
FT                   /db_xref="UniProtKB/TrEMBL:Q9YXE1"
FT                   /protein_id="AAC98077.1"
FT                   /translation="MPLAGSKRKRADEVAWSKRGTKKKPERTSAARAGPSRRIRPPLQI
FT                   ATFVAAGQSMVSVPSGGVCELLGSYARGADEANRHTNETVTYKVALDYHFVATAAACKY
FT                   SSIGTGVAWLVYDAQPTGNTPTTKDIFGYNDSLVAFPYTWKVSREVCHRFVVKRRCTFT
FT                   METDGRIGSDVPPANTSWSPCKRAIYFHKFFTGLGVKTEWKNLTDGGVGAIKKGALYLV
FT                   IAPGNGLEFTCHGQARLYFKSVGNQ"
FT   misc_feature    1211..1408
FT                   /note="small intergenic region (SIR)"
FT   gene            complement(1409..>1817)
FT                   /gene="C2"
FT   CDS             complement(1410..>1817)
FT                   /codon_start=1
FT                   /gene="C2"
FT                   /product="RepB"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:Q9YXE0"
FT                   /protein_id="AAC98079.1"
FT                   /translation="RIQNIPGHRKQSLYILGPTRTGKSTWARSLGRHNYWQNNVDWSSY
FT                   DEEAVYNIIDDIPFKFCPCWKQLVGCQKEYVVNPKYGKKKKVASKSIPSIILANEDEDW
FT                   LTVMTPGQREYFEANAVIYIMTAGEKFYKPA"
FT   gene            complement(1727..2557)
FT                   /gene="C1"
FT   CDS             complement(1727..2557)
FT                   /codon_start=1
FT                   /gene="C1"
FT                   /product="RepA"
FT                   /db_xref="GOA:Q9YXD9"
FT                   /db_xref="InterPro:IPR001146"
FT                   /db_xref="InterPro:IPR001191"
FT                   /db_xref="InterPro:IPR022690"
FT                   /db_xref="InterPro:IPR022692"
FT                   /db_xref="UniProtKB/TrEMBL:Q9YXD9"
FT                   /protein_id="AAC98078.1"
FT                   /translation="MTTVGSTDSGSAVRSFKHRNVNTFLTYPKCHLEPEAVGLHLWSLI
FT                   GHWNPAYIVVSREAHADGSWHIHALAQSVKPVQTTNPRFFDIEDFHPNIQSAKSADRVK
FT                   EYVLKNPIKQWEKGTFIPRKKSFATTSSEDRQPKPTKDDIVRDIIEHSTSKQEYLSMLQ
FT                   KALPYEWATKLQYFEYSASRLFPETAEVYTNPHPPTEPDLINFETIEDWLNPNIYQVSP
FT                   EAYMLLTPTCLTLEDAISDLEWMQSASRTSQGTGNNLSTSLGQQEQGNQHGQEA"
XX
SQ   Sequence 2707 BP; 573 A; 645 C; 755 G; 734 T; 0 other;
     accgcgctct ctcatgcgag gcccaccagg gccgagcggt cctgctttgg ggccctatgt        60
     ctttcgttaa agcctgtatg taataaggcg ctttggatcg catataagtt cgtgcccagg       120
     ctcagtggtg ctatggacgg ctctggagga gcgttgcctg ctttgcctca aagtgttctg       180
     ccgcgggtac cctcgccacc tccgtctgcc ggagtgctgc cgtggagtcg cgtcggtgag       240
     atagtgattt tcacctttgt tgctttgata gctttgtacc tgttatggtt gtgggtgctg       300
     agagatctta tcttccttgt taaggctcgc cgcgggatct caacggagga ggtgagcttt       360
     ggtacgtcag atctggttgt ttcgcaggct ccaacgccgg tcggtgtctc tgctagctgt       420
     ccgccgggac ctgtgccgtt cacggcctag gtagccctca gccaccatgc ctcttgccgg       480
     cagcaaaagg aagagggccg atgaggtggc ctggtctaag cgtggcacta agaagaagcc       540
     agagcgtaca tctgccgctc gggctggtcc gtctaggcgg attcgtccac ccttgcagat       600
     agccacgttt gtggcagccg gtcagtctat ggtgtctgtc ccttccggtg gggtctgtga       660
     actgctgggc tcctatgctc gaggcgctga cgaggccaac cgtcacacca acgagactgt       720
     cacgtacaag gttgccttgg actaccactt cgttgctact gcagccgcct gcaagtattc       780
     cagcattggc actggcgtgg cctggttggt gtatgacgca cagcctaccg gaaatacccc       840
     gacgacgaag gacatcttcg gctataatga ctcccttgtg gcgttcccct acacatggaa       900
     ggtttcaagg gaggtgtgtc atcgcttcgt ggtgaagagg agatgcactt tcacgatgga       960
     gaccgacggt cggattgggt cggatgttcc tccggcgaat acctcatggt cgccttgtaa      1020
     gcgggcgatt tacttccata agttcttcac cggcctgggt gtgaagacgg agtggaagaa      1080
     tctcacagac ggtggtgtgg gagcgattaa gaagggtgcg ttgtacctgg tcattgcccc      1140
     tggcaatggt ctagagttta cctgccatgg gcaggcccgt ctgtatttca aatcagttgg      1200
     gaatcagtga ttccctacag aataataaaa caagttttat aatttcattg atattggacg      1260
     aagtacaata caggatacaa tgtctgcaga tgtgcagacg acaacataaa actggttttg      1320
     tgtgtcgcga gggggaaccc ggagcacgct cccaaaacac ccaacacaca cacacccaac      1380
     tgaagattat tgaacatgca gccgccggcc taagcaggct tgtagaactt ctcgcctgct      1440
     gtcataatgt atatgaccgc gtttgcctcg aagtactccc gttgtccggg agtcatcacc      1500
     gtcagccagt cctcatcctc gttggctagg attattgatg gaatgctctt agaagctacc      1560
     ttcttcttct taccgtactt cgggttgacg acgtactctt tctggcagcc aaccagctgc      1620
     ttccagcaag gacagaattt gaagggtata tcatctatga tgttgtagac tgcttcctca      1680
     tcataggaag accagtccac attattctgc cagtagttgt ggcgccctag gcttcttgcc      1740
     catgttgatt tccctgttct tgttggccca aggatgtaga gagattgttt cctgtgccct      1800
     gggatgttct ggatgcggat tgcatccatt ctaagtcaga aattgcgtcc tcaagggtta      1860
     agcaggtagg agtaagcagc atgtaggctt ctggactaac ctgatagatg ttggggttga      1920
     gccaatcttc tatggtttcg aagtttatga ggtccggttc agtgggagga tgaggattgg      1980
     tgtatacttc tgcagtttca gggaacaatc tggaggctga gtactcaaag tactggagct      2040
     tcgttgccca ctcgtagggg agtgccttct gaagcatgga aaggtactct tgcttcgagg      2100
     tggagtgttc gatgatatct ctcacgatat catcttttgt gggtttaggt tgcctatcct      2160
     cagatgaagt ggtagcaaag gattttttgc gtgggatgaa agtacctttc tcccattgtt      2220
     tgatcgggtt tttgagcacg tattccttga ccctgtctgc ggacttggca ctctgaatgt      2280
     taggatggaa atcctcaatg tcaaagaacc tagggttcgt agtttgtaca ggcttgacgc      2340
     tctgagctaa ggcatggata tgccaggatc catcagcatg agcttccctg ctcacgacga      2400
     tgtaagctgg attccagtga cctatgagac tccagagatg gagccctaca gcttcaggtt      2460
     ctagatggca cttcggatat gtgagaaatg tgtttacgtt cctgtgcttg aaggaacgga      2520
     cggcagagcc tgagtctgtt gatcctacgg ttgtcatggc tgggcgagag gtctgattct      2580
     gagtctcaac taactctcct acaggtttgc gaatcgaaat ccgacctccc gtcttatata      2640
     gaagcttagt tgggctgggc cagaattttt tctgggccgg aatgagagag cgcaaaccca      2700
     taatatt                                                                2707
//