ID AF039031; SV 1; linear; genomic DNA; STD; VRL; 2582 BP. XX AC AF039031; XX DT 06-APR-1998 (Rel. 55, Created) DT 08-MAY-2018 (Rel. 136, Last updated, Version 4) XX DE Potato yellow mosaic virus strain PYMV/TT coat protein, replication DE enhancer protein (AC3), transcriptional activator (AC2), DE replication-associated protein (AC1), and AC4 (AC4) genes, complete cds. XX KW . XX OS Potato yellow mosaic virus OC Viruses; Geminiviridae; Begomovirus. XX RN [1] RP 1-2582 RA Humaharan P., Padidam M., Phelps R.H., Beachy R.N., Fauquet C.M.; RT "Distribution and diversity of geminiviruses in Trinidad and Tobago"; RL Unpublished. XX RN [2] RP 1-2582 RA Humaharan P., Padidam M., Phelps R.H., Beachy R.N., Fauquet C.M.; RT ; RL Submitted (17-DEC-1997) to the INSDC. RL Plant Division BCC206, The Scripps Research Institute, 10550 North Torrey RL Pines Rd, La Jolla, CA 92037, USA XX DR MD5; 1c1fdd639d37cadc4b89cfa140609b8c. XX FH Key Location/Qualifiers FH FT source 1..2582 FT /organism="Potato yellow mosaic virus" FT /chromosome="A component" FT /host="tomato" FT /strain="PYMV/TT; Trinidad and Tobago strain" FT /mol_type="genomic DNA" FT /note="infectious clone" FT /db_xref="taxon:10827" FT CDS 167..922 FT /codon_start=1 FT /product="coat protein" FT /db_xref="GOA:O71202" FT /db_xref="InterPro:IPR000263" FT /db_xref="InterPro:IPR000650" FT /db_xref="InterPro:IPR029053" FT /db_xref="UniProtKB/TrEMBL:O71202" FT /protein_id="AAC09253.1" FT /translation="MPKRDAPWRSMAGTSKVSRNANYSPRSGIGPRINKAAEWVNRPMY FT RKPRIYRTLRTPDVPRSCEGPCKVQSFEQRHDILHTGKVICISDVTRGNGITHRVGKRF FT CVKSVYILGKIWMDENIKLKNHTNSVMFWLVRDRRPYGTPMDFGQVFNMFDNEPSTATV FT KNDLRDRYQVMHRFYGKVTGGQYASNEQAIVRRFWKVNNHVVYNHQEAGKYENHTENAL FT LLYMACTHASNPVYATLKIRIYFYDSILN" FT gene complement(919..1317) FT /gene="AC3" FT CDS complement(919..1317) FT /codon_start=1 FT /gene="AC3" FT /product="replication enhancer protein" FT /db_xref="GOA:O71203" FT /db_xref="InterPro:IPR000657" FT /db_xref="UniProtKB/TrEMBL:O71203" FT /protein_id="AAC09256.1" FT /translation="MDSRTGELITARQAENGVFIWEIENPLYFKINRVEDILYTRTRIY FT TVQVRFNHNLRRALDLHKAYLNFQVWTTSMTASGSTYLARFRQLVLLYLDQLGVISINN FT VIRAVRFATDRSYVNYVLENHSIKLKFY" FT gene complement(1064..1453) FT /gene="AC2" FT CDS complement(1064..1453) FT /codon_start=1 FT /gene="AC2" FT /product="transcriptional activator" FT /db_xref="GOA:O71204" FT /db_xref="InterPro:IPR000942" FT /db_xref="UniProtKB/TrEMBL:O71204" FT /protein_id="AAC09255.1" FT /translation="MRSSSPSQPPSIKKAHRQAKRRAIRRRRIDLDCGCSIYFHIDCAG FT HGFTHRGAHHCTSGREWRVYLGDRKSPLFQDKPSRGHTIHQDQDIHRPSPVQSQPQESV FT GSPQSLPELPSLDDIDDSFWVDLFS" FT gene complement(1395..2447) FT /gene="AC1" FT CDS complement(1395..2447) FT /codon_start=1 FT /gene="AC1" FT /product="replication-associated protein" FT /note="Rep" FT /db_xref="GOA:O71205" FT /db_xref="InterPro:IPR001191" FT /db_xref="InterPro:IPR001301" FT /db_xref="InterPro:IPR022690" FT /db_xref="InterPro:IPR022692" FT /db_xref="UniProtKB/TrEMBL:O71205" FT /protein_id="AAC09254.1" FT /translation="MPPKRFRINSKNYFLTYPKCSLSKEEALSQLQNLNTPTNKKFIKI FT CRELHENGEPHLHVLVQFEGKYQCTNNRFFDLVSPTRSTHFHPNIQGAKSSSDVKSYID FT KDGDSVEWGEFQIDGRSARGGQQSVNDTYAKALNAASAAEALQIIKEEQPQHFFLQHHN FT LVANAAKIFTKAPEPWVPPFQLSSFTNVPDEMQEWADNYFGRGAAARPERPISIIIEGD FT SRTGKTMWARVLGPHNYLSGHLDFNSRVYSNGVEYNVIDDVAPQYLKLKHWKELLGAQK FT DWQSNCKYGKPVQIKGGIPSIVLCNPGEGSSYKAFLEKIENASLKNWTLKNAVFITLTA FT PLYQESTQTS" FT gene complement(2036..2293) FT /gene="AC4" FT CDS complement(2036..2293) FT /codon_start=1 FT /gene="AC4" FT /product="AC4" FT /db_xref="InterPro:IPR002488" FT /db_xref="UniProtKB/TrEMBL:O71206" FT /protein_id="AAC09257.1" FT /translation="MGNLISTCLSSSKVNISARITDSSIWSPQPGQHISIRTYRELNRA FT PTSSPISTRTEIQLNGENSRSTADLLEEVNSQLTIHMPRR" XX SQ Sequence 2582 BP; 662 A; 572 C; 600 G; 748 T; 0 other; accggatggc cgcgcgattt tttccctatg ggcctttctt taatgggctt taatttggcc 60 caatcatagt ctgtctgcca aacctaaata aatgaaaata ctttggcgct aagttagtct 120 tttgtctata aattaaagcc tcttggccca ctctctttaa ctcaaaatgc ctaagcgtga 180 cgctccatgg cgttcaatgg cgggaacctc aaaggttagc cgcaacgcta attactctcc 240 ccgttcagga attgggccaa gaattaacaa ggccgctgaa tgggttaaca ggcccatgta 300 caggaagccc aggatatacc ggacgctcag gacgcccgat gtaccaagaa gctgtgaagg 360 gccttgtaag gtccagtctt tcgagcagcg acatgacatc ttacacactg gtaaggttat 420 atgcatatct gacgttactc gcggtaacgg tattacccac cgtgtcggga agcggttttg 480 tgttaagtcc gtctacatat taggcaagat atggatggac gagaatatca agctcaagaa 540 ccacaccaac agcgtcatgt tctggctagt cagagatcgt agaccgtatg gaacacctat 600 ggatttcgga caagtgttca acatgttcga caacgagcct agtaccgcca cagttaagaa 660 cgatcttcgt gatcgttacc aggtcatgca taggttctat ggcaaggtga caggcggaca 720 gtatgccagc aacgagcagg ctattgtcag gcggttctgg aaggtcaaca accacgtggt 780 ctacaatcat caggaagctg gcaagtacga gaaccatacc gagaacgccc tattattgta 840 catggcatgt actcatgcct caaaccctgt atatgcaacg cttaagattc ggatctattt 900 ttatgattcg atcttaaatt aataaaattt taattttatt gaatgatttt caagtacata 960 atttacatat gatcggtctg ttgcaaaacg aacagctcta attacattgt taattgaaat 1020 aacgcctaac tgatctaaat acaacaggac taattgtcta aacctagcta aataagtcga 1080 cccagaagct gtcatcgatg tcgtccagac ttggaagttc aggtaggctt tgtggagatc 1140 caacgctctc ctgaggttgt gattgaaccg gacttggacg gtgtatatcc tggtcctggt 1200 gtatagtatg tcctctactc ggtttatctt gaaatagagg ggattttcta tctcccagat 1260 aaacacgcca ttctctgcct gacgtgcagt gatgagctcc cctgtgcgtg aatccatgtc 1320 ctgcgcagtc tatgtggaag tatatggagc aaccgcaatc taagtcaatg cgtctcctcc 1380 tgatggccct cctcttagct tgtctgtgtg ctttcttgat agaggggggc tgtgagggtg 1440 atgaagaccg cattcttgag agtccagttt ttgagagacg cattttctat tttctcgagg 1500 aaagctttat agctggaacc ctcgccagga ttgcagagca cgattgatgg gatccctcct 1560 ttaatttgaa cgggctttcc gtacttgcaa tttgattgcc aatctttttg ggccccgaga 1620 agttctttcc agtgctttaa ctttaggtat tgcggtgcga cgtcatcaat gacgttatac 1680 tccactccat tcgaatagac cctagaattg aaatcgagat gaccgctcaa gtaattatgt 1740 gggcctaaga cccgtgccca catcgtcttg cccgttcgag agtcaccctc aattatgata 1800 ctaataggtc tctccggccg cgcagcggca ccccttccga aataattatc tgcccactct 1860 tgcatctcgt caggcacgtt agtgaaagaa gagagttgaa acggaggaac ccacggttct 1920 ggagccttgg taaatatttt agctgcgtta gcaacaagat tatgatgttg aaggaaaaag 1980 tgttgtggtt gttcctcctt aataatttgc agagcttctg cggcagatgc agcattcaac 2040 gccttggcat atgtatcgtt aactgactgt tgacctcctc tagcagatct gccgtcgatc 2100 tggaattctc cccattcaac tgaatctccg tccttgtcga tataggactt gacgtcggag 2160 ctcgatttag ctccctgtat gttcggatgg aaatgtgttg acctggttgg ggagaccaga 2220 tcgaagaatc tgttattcgt gcactgatat ttaccttcga actggacaag cacgtggaga 2280 tgaggttccc cattctcgtg caattctctg caaatcttga tgaatttctt gttagtcgga 2340 gtgtttaggt tttgtagttg ggaaagtgcc tcctctttgc taagagagca tttgggatat 2400 gtgaggaaat agtttttaga gttaattcta aagcgtttgg gtggcatttt tgtaataaag 2460 gctgtgtaca ccgattggag ctctctcaaa cttactcatt caatcggtgt attggggtac 2520 tatatatact ataaccctca ttagaggatc ttggacacgt ggcggccatc cgctataata 2580 tt 2582 //