ID AF033813; SV 1; linear; genomic RNA; STD; VRL; 5833 BP. XX AC AF033813; XX DT 23-JAN-1998 (Rel. 54, Created) DT 15-APR-2005 (Rel. 83, Last updated, Version 4) XX DE Moloney murine sarcoma virus, complete genome. XX KW . XX OS Moloney murine sarcoma virus OC Viruses; Ortervirales; Retroviridae; Orthoretrovirinae; Gammaretrovirus. XX RN [1] RP 1-5833 RA Petropoulos C.J.; RT "Appendix 2: Retroviral taxonomy, protein structure, sequences, and genetic RT maps"; RL (in) Coffin J.M. (Eds.); RL RETROVIRUSES; RL Cold Spring Harbor Laboratory Press, Cold Spring Harbor, New York, NY, USA RL (1997) XX RN [2] RP 1-5833 RA Chappey C.; RT ; RL Submitted (12-NOV-1997) to the INSDC. RL NIH, NLM, Rockville Pike, Bethesda, MD 20894, USA XX DR MD5; 9cea473a815125bdc80a91e17652ea9a. DR EuropePMC; PMC102031; 11024121. DR EuropePMC; PMC104250; 10438813. DR EuropePMC; PMC3835772; 24298557. DR RFAM; RF00374; Gammaretro_CES. DR RFAM; RF01073; GP_knot1. XX FH Key Location/Qualifiers FH FT source 1..5833 FT /organism="Moloney murine sarcoma virus" FT /mol_type="genomic RNA" FT /db_xref="taxon:11809" FT mRNA join(1..145,3408..5833) FT /product="MOS" FT 5'UTR 70..145 FT mRNA 557..2173 FT /gene="gag" FT /product="Pr65" FT CDS 557..2173 FT /codon_start=1 FT /gene="gag" FT /product="Pr65" FT /db_xref="GOA:O56222" FT /db_xref="InterPro:IPR000840" FT /db_xref="InterPro:IPR001878" FT /db_xref="InterPro:IPR002079" FT /db_xref="InterPro:IPR003036" FT /db_xref="InterPro:IPR008919" FT /db_xref="InterPro:IPR010999" FT /db_xref="InterPro:IPR036875" FT /db_xref="InterPro:IPR036946" FT /db_xref="UniProtKB/TrEMBL:O56222" FT /protein_id="AAC82570.1" FT /translation="MGQTVTTPLSLTLDHWKDVERLAHNQSVDVKKRRWVTFCSAEWPT FT FNVGWPRDGTFNRDLITQVKIKVFSPGPHGHPDQVPYIVTWEALAFDPPPWVKPFVHPK FT PPPPLLPSAPSLPLEPPLSTPPQSSLYPALTPSLGAKPKPQVLSDSGGPLIDLLTEDPP FT PYRDPRPPPSDRDGDSGEATPAGEAPDPSPMASRLRGRREPPVADSTTSQAFPLRTGGN FT GQLQYWPFSSSDLYNWKNNNPSFSEDPGKLTALIESVLITHQPTWDDCQQLLGTLLTGE FT EKQRVLLEARKAVRGDDGRPTQLPNEVDAAFPLERPDWEYTTQAGRNHLVHYRQLLIAG FT LQNAGRSPTNLAKVKGITQGPNESPSAFLERLKEAYRRYTPYDPEDPGQETNVSMSFIW FT QSAPDIGRKLERLEDLRNKTLGDLVREAERIFNKRETPEEREERIRREREEKEERRRTE FT DEQKEKERDRRRHREMSRLLATVVSGQRQDRQEGERRRSQLDCDQCTYCEEQGHWAKDC FT PKRPRGPRGPRPQTSLLTLDD" FT mat_peptide 560..952 FT /gene="gag" FT /product="MA" FT mat_peptide 1202..1993 FT /gene="gag" FT /product="CA" FT mat_peptide 1991..2170 FT /gene="gag" FT /product="NC" FT CDS 3390..4514 FT /codon_start=1 FT /product="MOS" FT /db_xref="GOA:Q85651" FT /db_xref="InterPro:IPR000719" FT /db_xref="InterPro:IPR008271" FT /db_xref="InterPro:IPR011009" FT /db_xref="InterPro:IPR017441" FT /db_xref="UniProtKB/TrEMBL:Q85651" FT /protein_id="AAC82571.1" FT /translation="MAHSTPCSQTSLAVPNHFSLVSHVTVPSEGVMPSPLSLCRYLPRE FT LSPSVDSRSCSIPLVAPRKAGKLFLGTTPPRAPGLPRRLAWFSIDWEQVCLMHRLGSGG FT FGSVYKATYHGVPVAIKQVNKCTEDLRASQRSFWAELNIAGLRHDNIVRVVAASTRTPE FT DSNSLGTIIMEFGGNVTLHQVIYDATRSPEPLSCRKQLSLGKCLKYSLDVVNGLLFLHS FT QSILHLDLKPANILISEQDVCKISDFGCSQKLQVLRGRQASPPHIGGTYTHQAPEILKG FT EIATPKADIYSFGITLWQMTTREVPYSGEPQYVQYAVVAYNLRPSLAGAVFTASLTGKA FT LQNIIQSCWEARGLQRPSAELLQRDLKAFRGTLG" FT mat_peptide 3405..4511 FT /product="MOS" FT 3'UTR 4800..5244 XX SQ Sequence 5833 BP; 1427 A; 1673 C; 1484 G; 1249 T; 0 other; attcccaata aagcctcttg ctgtttgcat ccgaatcgtg gtctcgctgt tccttgggag 60 ggtctcctct gagtgattga ctacccacga cgggggtctt tcatttgggg gctcgtccgg 120 gatttggaga cccctgccca gggaccaccg acccaccacc gggaggtaag ctggccagca 180 acttatctgt gtctgtccga ttgtctagtg tctatgtttg atgttatgcg cctgcgtctg 240 tactagttag ctaactagct ctgtatctgg cggacccgtg gtggaactga cgagttctga 300 acacccggcc gcaaccctgg gagacgtccc agggactttg ggggccgttt ttgtggcccg 360 acctgaggaa gggagtcgat gtggaatccg accccgtcag gatatgtggt tctggtagga 420 gacgagaacc taaaacagtt cccgcctccg tctgaatttt tgctttcggt ttggaaccga 480 agccgcgcgt cttgtctgct gcagcatcgt tctgtgttgt ctctgtctga ctgtgtttct 540 gtatttgtct gaaaatatgg gccagactgt taccactccc ttaagtttga ccttagatca 600 ctggaaagat gtcgagcggc tcgctcacaa ccagtcggta gatgtcaaga agagacgttg 660 ggttaccttc tgctctgcag aatggccaac ctttaacgtc ggatggccgc gagacggcac 720 ctttaaccga gacctcatca cccaggttaa gatcaaggtc ttttcacctg gcccgcatgg 780 acacccagac caggtcccct acatcgtgac ctgggaagcc ttggcttttg acccccctcc 840 ctgggtcaag ccctttgtac accctaagcc tccgcctcct cttcttccat ccgcgccgtc 900 tctccccctt gaacctcctc tttcgacccc gcctcaatcc tccctttatc cagccctcac 960 tccttctttg ggcgccaaac ctaaacctca agttctttct gacagtgggg ggccgctcat 1020 cgacctactt acagaagacc ccccgcctta tagggaccca agaccacccc cttccgacag 1080 ggacggagat agtggagaag cgacccctgc gggagaggca ccggacccct ccccaatggc 1140 atctcgcctg cgtgggagac gggagccccc tgtggccgac tccactacct cgcaggcatt 1200 ccccctccgc acaggaggaa acggacagct tcaatactgg ccgttctcct cttctgacct 1260 ttacaactgg aaaaataata acccttcttt ttctgaagat ccaggtaaac tgacagctct 1320 gatcgagtct gtcctcatca cccatcagcc cacctgggac gactgtcagc agctgttggg 1380 gactctgctg accggggaag aaaaacaacg ggtgctctta gaggctagaa aggcggtgcg 1440 gggcgatgat gggcgcccca ctcaactgcc caatgaagtc gatgccgctt ttcccctcga 1500 gcgcccagac tgggagtaca ccacccaggc aggtaggaac cacctagtcc actatcgcca 1560 gttgctcata gcgggtctcc aaaacgcggg cagaagcccc accaatttgg ccaaggtaaa 1620 aggaataaca caagggccca atgagtctcc ctcggccttc ctagagagac ttaaggaagc 1680 ctatcgcagg tacactcctt atgaccctga ggacccaggg caagaaacta atgtgtctat 1740 gtctttcatt tggcagtctg ccccagacat tgggagaaag ttagagaggt tagaagattt 1800 gagaaacaag acgcttggag atttggttag agaggcagaa aggatcttta ataaacgaga 1860 aaccccggaa gaaagagagg aacgtatcag gagagaaaga gaggaaaagg aagaacgccg 1920 taggacagag gatgagcaga aagagaaaga aagagatcgt aggagacata gagagatgag 1980 caggctattg gccactgtcg ttagtggaca gagacaggat agacaggaag gagaacgaag 2040 gaggtcccaa ctcgactgcg accagtgtac ctactgcgaa gaacaagggc actgggctaa 2100 agattgtccc aagagaccac gaggacctcg gggaccaaga ccccagacct ccctcctgac 2160 cctagatgac tagggaggtc agggtcagga gcccccccct gaacccagga taaccctcaa 2220 agtcgggggg caacccgtca ccttcctggt agatactggg gcccagacca acaaaaggcc 2280 tatcaagaaa tcaagcaagt tcttctaact gccccagccc tggggttgcc agatttgact 2340 aagccctttg aactctttgt cgacgagaag cagggctacg ccaaaggtgt cctaacgcaa 2400 aaactgggac cttggcgtcg gccggtggcc tacctgtcca aacagctaga cccagtagca 2460 gctgggtgac ccccttgcct acggatggta gcagccattg ccgtactgac aaaggatgca 2520 ggcaagctaa ccatgggaca gccactagtc attctggccc cccatgcagt agaggcacta 2580 gtcaaacaac cccccgaccg ctggctttcc aacgcccgga tgactcacta tcaggccttg 2640 cttttggaca cggaccgggt ccagttcaga ccggtggtag ccctgaaccc ggctacgctg 2700 ctcccactgc ctgagaaagg gctgcaacac aactgccttg atatcctggc cgaagctcat 2760 ggaacccgac ccgacctaac ggaccagccg ctcccagacg ccgaccacac ctggtacacg 2820 gatggaagca gtcttttaca agagggacag cgtaaggcgg gagctgcggt gaccaccgag 2880 accgagaagc cttcccaacc aagaaaaaaa accgccaagg tcgtaaatct tccccaggtt 2940 cggcatgctt caggtattgg gaactgacaa tgggcctgcc ttcgtctcca aggtgagtca 3000 gacagtggcc gatctgttgg ggattgattg gaaattacat tgtgcataca gaccccaaag 3060 ctcaggccag gtagaaagaa taaatagaac catcaaggag actttaacta aattaacgct 3120 tgcaactggc tctagggact gggtgctcct actcccctta gccctgtatc gagcccgcaa 3180 cacgccgggc ccccatggcc tcaccccata tgagatctta tgtggggcac ccccgcccct 3240 tgtaaacttc cctgaccctg acatgacaag agttactaac agcccctctc tccaagctca 3300 catacaggct ctctacttag tccagcacga agtctggaga cctctggcgg cagcctacca 3360 agaacaactg gaccatcctc tagactgaca tggcgcattc aacgccatgc tcccaaactt 3420 ccctggctgt tcctaatcat ttctccctag tgtctcatgt gactgtccca tctgagggtg 3480 taatgccttc gcctctaagc ctgtgtcgct acctccctcg tgagctgtcg ccatcggtag 3540 actcgcggtc ctgcagcatt cctttggtgg ccccgaggaa ggcagggaag ctcttcctgg 3600 ggaccactcc tcctcgggct cccggactgc cacgccggct ggcctggttc tccatagact 3660 gggaacaggt atgtctgatg cataggctgg gctctggagg gtttggctcg gtgtacaaag 3720 ccacttacca cggtgttcct gtggccatca agcaagtaaa caagtgcacc gaggacctac 3780 gtgcatccca gcggagtttc tgggctgaac tgaacattgc aggactacgc cacgacaaca 3840 tagttcgggt tgtggctgcc agcacgcgca cgcccgaaga ctccaacagc ctaggtacca 3900 taatcatgga gtttgggggc aacgtgactc tacaccaagt catctacgat gccacccgct 3960 caccggagcc tctcagctgc agaaaacaac taagtttggg gaagtgcctc aagtattccc 4020 tagatgttgt taacggcctg ctttttctcc actcacaaag cattttgcac ttggacctga 4080 agccagcgaa cattttgatt agtgagcagg acgtttgtaa gatcagtgac ttcggctgct 4140 cccagaagct gcaggttctg cggggccggc aggcgtcccc tccccacata gggggcacgt 4200 acacgcacca agctccggag atcctaaaag gagagattgc cacgcccaaa gctgacatct 4260 actcttttgg aatcaccctg tggcagatga ctaccagaga ggtgccttac tccggcgaac 4320 ctcagtacgt gcagtatgca gtggtagcct acaatctgcg tccctcactg gcaggagcgg 4380 tgttcaccgc ctccctgact ggaaaggcac tgcagaacat catccagagc tgctgggagg 4440 cccgcggcct gcagaggccg agtgcagaac tgctccaaag ggacctcaag gctttccgag 4500 ggacactagg ctgactccat cgagccagtg tagagataag cttttgtttc tgtttatttt 4560 ttatgggacc ccttattgta ctcctaatga ttttgctctt cggaccctgc attcttaatc 4620 gattagtcca atttgttaaa gacaggatat cagtggtcca ggctctagct ttgactcaac 4680 aatatcacca gctgaagcct atagagtacg agccatagtt aaaataaaag attttattta 4740 gtctccagaa aaagggggga atgaaagacc ccacccgtag gtggcaagct agcttaagta 4800 acgccacttt gcaaggcatg gaaaaataca taactgagaa tagaaaagtt cagatcaagg 4860 tcaggaacaa agaaacagct gaataccaaa caggatatct gtggtaagcg gttcctgccc 4920 cggctcaggg ccaagaacag atgagacagc tgagtgatgg gccaaacagg atatctgtgg 4980 taagcagttc ctgccccggc tcggggccaa gaacagatgg tccccagatg cggtccagcc 5040 ctcagcagtt tctagtgaat catcagatgt ttccagggtg ccccaaggac ctgaaaatga 5100 ccctgtacct tatttgaact aaccaatcag ttcgcttctc gcttctgttc gcgcgcttcc 5160 gctctccgag ctcaataaaa gagcccacaa cccctcactc ggcgcgccag tcttccgata 5220 gactgcgtcg cccgggtacc cgtattccca ataaagcctc ttgctgtttg catccgaatc 5280 gtggtctcgc tgttccttgg gagggtctcc tctgagtgat tgactaccca cgacgggggt 5340 ctttcattaa atgaaagacc ccacccgtag gtggcaagct agcttaagta acgccacttt 5400 gcaaggcatg gaaaaataca taactgagaa tagaaaagtt cagatcaagg tcaggaacaa 5460 agaaacagct gaataccaaa caggatatct gtggtaagcg gttcctgccc cggctcaggg 5520 ccaagaacag atgagacagc tgagtgatgg gccaaacagg atatctgtgg taagcagttc 5580 ctgccccggc tcggggccaa gaacagatgg tccccagatg cggtccagcc ctcagcagtt 5640 tctagtgaat catcagatgt ttccagggtg ccccaaggac ctgaaaatga ccctgtacct 5700 tatttgaact aaccaatcag ttcgcttctc gcttctgttc gcgcgcttcc gctctccgag 5760 ctcaataaaa gagcccacaa cccctcactc ggcgcgccag tcttccgata gactgcgtcg 5820 cccgggtacc cgt 5833 //