ID   AF032404; SV 1; linear; genomic RNA; STD; VRL; 1235 BP.
XX
AC   AF032404;
XX
DT   08-JAN-1998 (Rel. 54, Created)
DT   03-MAR-2000 (Rel. 62, Last updated, Version 2)
XX
DE   Johnsongrass mosaic virus Krish-infecting strain polyprotein gene, partial
DE   cds.
XX
KW   .
XX
OS   Johnsongrass mosaic virus
OC   Viruses; Riboviria; Potyviridae; Potyvirus.
XX
RN   [1]
RP   1-1235
RA   Suranto, Gough K.H., Shukla D.D., Pallaghy C.K.;
RT   "Sequence of the coat protein region of the Krish-infecting strain of
RT   Johnsongrass mosaic potyvirus";
RL   Unpublished.
XX
RN   [2]
RP   1-1235
RA   Suranto, Gough K.H., Shukla D.D., Pallaghy C.K.;
RT   ;
RL   Submitted (29-OCT-1997) to the INSDC.
RL   Botany, La Trobe University, Kingsbury Drive, Bundoora, Vic 3083, Australia
XX
DR   MD5; c9d78fb7ed4b3e213b0f94bdad248541.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1235
FT                   /organism="Johnsongrass mosaic virus"
FT                   /strain="Krish-infecting"
FT                   /mol_type="genomic RNA"
FT                   /db_xref="taxon:31742"
FT   mRNA            <1..1235
FT                   /product="polyprotein"
FT   mat_peptide     <1..129
FT                   /product="large nuclear inclusion protein/polymerase"
FT                   /note="NIb"
FT   CDS             <1..1041
FT                   /codon_start=1
FT                   /product="polyprotein"
FT                   /db_xref="GOA:O56218"
FT                   /db_xref="InterPro:IPR001592"
FT                   /db_xref="UniProtKB/TrEMBL:O56218"
FT                   /protein_id="AAB94618.1"
FT                   /translation="LSETALRKLYLDESCDQSELLRYYEEMYKNAMTSEDVVDVKHQSG
FT                   NEDAGRQKSATPAANQTASGDGKPAQTAATAENKPSSDNTSNAQGTSQTKGDGESGGTN
FT                   ATAAKKDKDVDVGSTGTFVIPKLKKVSPKMRLPMVSNKAILNLDHLIQYKPDQRDISNA
FT                   RATHTQFQFWYNRIKKEYDVDDEQMRILMNGLMVWCIENGTSPDINGYWTMADGKDQSE
FT                   FPLKPIVENAKPTLRQCMMHFSDAAEAYIEMRNLDEPYMPRYGLLRNLNDKSLARYAFD
FT                   FYEINSRTPNRAREAHAQMKAAAIRGSTNHMFGLDGNVGESSENTERHTAADVSRNVHS
FT                   YRGAKI"
FT   mat_peptide     130..1038
FT                   /product="coat protein"
FT   3'UTR           1042..1235
XX
SQ   Sequence 1235 BP; 430 A; 236 C; 307 G; 262 T; 0 other;
     ttgtcagaga cagctctacg gaaattatat cttgatgagt catgcgatca aagtgaacta        60
     ctacgttatt atgaagagat gtacaagaac gcaatgacga gtgaagatgt ggtggatgta       120
     aaacatcagt cgggcaatga ggatgctggg agacagaaga gtgcaacacc agctgcaaat       180
     caaacagcaa gtggggatgg taaaccagca caaacggcag cgacagcaga gaacaagcca       240
     tcttcagata acacttcaaa cgctcaagga acttcacaaa ccaaaggaga tggtgaatcg       300
     ggtggaacga atgctacagc agcaaagaag gataaggatg ttgacgtcgg atcaactgga       360
     acttttgtaa tcccgaaatt gaagaaggtt tcaccaaaga tgcgtctacc catggtgagc       420
     aacaaagcca tactcaattt ggatcatcta atccaataca aaccagatca gagagacatt       480
     tcaaatgcac gagctacaca cacacaattc cagttctggt acaacagaat caagaaagag       540
     tatgatgttg atgatgagca aatgagaatt ttgatgaatg gattgatggt ttggtgtata       600
     gagaatggca catcccctga tataaatggt tattggacca tggcggatgg gaaagatcaa       660
     tcagagtttc cactaaaacc aatagtggaa aacgcaaaac caacattacg acagtgcatg       720
     atgcatttta gtgatgccgc agaagcatac attgaaatga gaaatttgga tgagccgtac       780
     atgccaagat acggtctcct taggaatcta aatgataaga gcctcgctcg atacgcattt       840
     gatttctatg agatcaattc gcgcacacca aatagagcga gagaggcaca tgcacaaatg       900
     aaggcagcag caattagagg gtccacgaat cacatgtttg gactcgacgg gaatgttgga       960
     gagagctctg agaacacaga gcggcacaca gctgcagatg tctcacggaa tgttcattcg      1020
     taccgtgggg ctaaaatcta aggaggagga acaaccgtct atctgacgtt aaaggatgac      1080
     tggccaagtc tgaaaattgg cgagatacca gttccgaata gtccatacag aactagaggt      1140
     gaacagagag cactataaag gtttagtagg gatcgagaga tgacacgtag gacctcaatg      1200
     accatgccta gcgctagcat tgtgtgaagc tctaa                                 1235
//