ID AF020660; SV 1; linear; genomic DNA; STD; VRL; 2955 BP. XX AC AF020660; XX DT 29-SEP-1997 (Rel. 52, Created) DT 05-AUG-2023 (Rel. 144, Last updated, Version 4) XX DE Tomato spotted wilt virus strain TSWV-D non-structural protein (NSs) and DE nucleocapsid protein (Nc) genes, complete cds. XX KW . XX OS Orthotospovirus tomatomaculae OC Viruses; Riboviria; Orthornavirae; Negarnaviricota; Polyploviricotina; OC Ellioviricetes; Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-2955 RX DOI; 10.1006/viro.1998.9131. RX PUBMED; 9581790. RA Qiu W.P., Geske S.M., Hickey C.M., Moyer J.W.; RT "Tomato spotted wilt Tospovirus genome reassortment and genome RT segment-specific adaptation"; RL Virology 244(1):186-194(1998). XX RN [2] RP 1-2955 RA Qiu W.-P., Geske S.M., Hickey C.M., Moyer J.W.; RT ; RL Submitted (23-AUG-1997) to the INSDC. RL Plant Pathology, North Carolina State University, Raleigh, NC 27695 XX DR MD5; 950cc57c8ae8c0ca12901d97bf0d7943. XX FH Key Location/Qualifiers FH FT source 1..2955 FT /organism="Orthotospovirus tomatomaculae" FT /chromosome="S RNA" FT /strain="TSWV-D" FT /mol_type="genomic DNA" FT /db_xref="taxon:3052585" FT CDS 89..1492 FT /codon_start=1 FT /gene="NSs" FT /product="non-structural protein" FT /db_xref="InterPro:IPR004915" FT /db_xref="UniProtKB/TrEMBL:O37369" FT /protein_id="AAC59458.1" FT /translation="MSSSVYESIIQTRASVWGSTASGKAVVDSYWIHELGTGSPLVQTQ FT LYSDSRSKSSFGYTAKVGNLPCEEEEILSQHVYIPIFDDIDFSINIDDSVLALSVCSNT FT VNTNGVKHQGHLKVLSPAQLHSIGSTMNRSDITDRFQLQEKDIIPNDRYIEAANKGSLS FT CVKEHTYKIEMCYNQALGKVNVLSPNRNVHEWLYSFKPSFNQVESNNRTVNSLAVKSLL FT MSAENNIMPNPQAFVKASTDSHFKLSLWLRVPKVLKQVSIQKLFKVAGDETNKTFYLSI FT ACIPNHNSVETALNISVICKHQLPIRKCKIPFELSMMFSDLKEPYNIVHDPSYPQRIVH FT ALLETHTSFAQVLCNNLQEDVIIYTLNNYVLTPGKLDLGERTLNYSEDICKRKYFLSKT FT LECLPSNTRTMSYLDSIQIPSWKIDFARGEIKISPQPVSVAKSLLKLDLSRIEKKESKI FT PETYASGSK" FT gene 89..1492 FT /gene="NSs" FT CDS complement(2028..2804) FT /codon_start=1 FT /gene="Nc" FT /product="nucleocapsid protein" FT /db_xref="GOA:O37370" FT /db_xref="InterPro:IPR002517" FT /db_xref="UniProtKB/TrEMBL:O37370" FT /protein_id="AAC59459.1" FT /translation="MSKVKLTKENIVALLTQGKDLEFEEDQNLVAFNFKTFCLENLDQI FT KKMSVISCLTFLKNRQSIMKVIKQSDFTFGKITIKKTSDRIGATDMTFRRLDSLIRVRL FT VEETGNSENLNTIKSKIASHPLIQAYGLPLDDAKSVRLAIMLGGSLPLIASVDSFEMIS FT VVLAIYQDAKYKDLGIDPKKYDTREALGKVCTVLKSKAFEMNEDQVKKGKEYAAILSSS FT NPNAKGSIAMEHYSETLNKFYEMFGVKKQAKLAELA" FT gene complement(2028..2804) FT /gene="Nc" XX SQ Sequence 2955 BP; 936 A; 546 C; 476 G; 997 T; 0 other; agagcaattg tgtcataatt ttattcttaa tcaaacctca cttagaaaat cacaatactg 60 taataagaac acagtaccaa taaccataat gtcttcaagt gtttatgagt cgatcattca 120 gacaagagct tcagtctggg gatcaactgc atctggtaaa gctgttgtag attcttactg 180 gattcatgaa cttggcactg gttctccact agttcaaacc cagctgtatt ctgattcaag 240 aagcaaaagt agctttggct atactgcaaa ggtagggaat cttccctgtg aagaagaaga 300 gattctttct cagcatgtgt atatccctat ttttgatgat attgatttta gcattaatat 360 tgatgactct gttctggcac tatctgtttg ctcaaataca gtcaatacta acggagtgaa 420 acatcaaggt catttgaaag ttttgtctcc tgctcagctc cactctattg gatctaccat 480 gaacagatct gatattacag accgattcca gcttcaagaa aaagacataa ttcccaatga 540 cagatacatc gaagctgcaa acaaaggctc tttgtcttgt gtcaaagagc atacctataa 600 gatcgagatg tgctataatc aagctttggg caaagtgaat gttttatccc ctaacaggaa 660 tgtccatgaa tggctgtaca gtttcaagcc aagtttcaat caagttgaaa gcaacaacag 720 aactgtaaat tctcttgcag tgaaatctct gctcatgtca gcagaaaaca acatcatgcc 780 taaccctcag gcttttgtca aagcttccac tgattctcat ttcaaactga gcctctggct 840 aagggtccca aaggttctga agcaggtctc tattcagaag ttgttcaaag ttgcaggaga 900 cgaaacaaat aaaacatttt atttatctat tgcttgcatt ccaaaccata acagtgttga 960 gacagcttta aacatttctg ttatttgcaa gcatcagctc ccaattcgta aatgtaaaat 1020 tccttttgaa ttatcaatga tgttttctga tttaaaggag ccttacaaca ttgttcatga 1080 tccttcgtat cctcagagga ttgttcatgc tctgcttgaa actcacacat cttttgcaca 1140 agttctttgc aacaacttac aagaagatgt gatcatctac actttgaaca actatgtgct 1200 aactcctgga aagttagatt taggtgaaag aaccttaaat tacagtgaag atatctgcaa 1260 aaggaaatat ttcctttcaa aaacacttga atgtcttcca tctaacacac gaactatgtc 1320 ttacttggac agcatccaaa tcccttcctg gaagatagac tttgccaggg gagaaattaa 1380 gatttctcca caacctgttt cagttgcaaa atctttgtta aagcttgatt taagcaggat 1440 cgaaaagaaa gaatctaaga ttccagaaac atatgcttca ggatcaaaat aatcttgctg 1500 tgtccggttt ttctaattat gttatgttta ttttcttttt tacttataat tatttctctg 1560 ttttgtcatt tcttttaagt tcctcctgtt taatagaaac cataaaacaa aaataaaata 1620 aaaataaaat caaaaatgaa acaaaaatca aaaaatgaaa caaaaataaa aaataaaaaa 1680 tgaaataaaa acaacaaaaa aattaaaaaa cagaaaccca aaaaagatcc cgaaagggac 1740 aatcttggcc aaatttgggt tttgttttgt ttttgttttt tgttttttgt ttttattttt 1800 attttattta tttattttat tttattttta ttttttattt tgttttttat tttatgtttt 1860 ttgttgtttt tgttattttg tttatttatt aagcataaca cacagaaagc aaactttaat 1920 taaacacact tattttaaat ttaacacact aagcaagcac aagcaataaa gataaaaaaa 1980 gctttatata tttgtagact tttccataat ttaacttaca gctgatttta agcaagttct 2040 gcgagttttg cctgtttttt aaccccgaac atttcataga acttgttaag agtttcactg 2100 taatgttcca tagcaatact tcctttagca ttaggattgc tggagctgag tatagcagca 2160 tactcttttc ctttcttcac ctgatcttca ttcatttcaa atgctttgct tttcagcaca 2220 gtgcaaactt ttcctaaggc ttctctggtg tcatacttct ttgggtcaat cccgaggtct 2280 ttgtattttg catcctgata tatagccaag acaacactga tcatctcaaa gctatcaact 2340 gaagcaataa gaggtaagct acctcccagc attatggcaa gcctcacaga ctttgcatca 2400 tcaagaggta atccataggc ttgaatcaaa gggtgggaag caatcttaga tttgatagta 2460 ttgagattct cagaattccc agtttcctct acaagcctga ccctgatcaa gctatcaagc 2520 cttctgaagg tcatgtcagt ggctccaatc ctgtctgaag ttttctttat ggtaatttta 2580 ccaaaagtaa aatcactttg tttaataacc ttcattatac tctgacgatt cttcaggaat 2640 gtcagacatg aaataacgct catcttcttg atctggtcga ggttttccag acaaaaagtc 2700 ttgaagttga atgctaccag attctgatct tcctcaaact caaggtcttt gccttgtgtc 2760 aacaaagcaa caatgttttc cttagtgagc ttaaccttag acatgatgat tgtagaagtt 2820 gttatatgct ttgaccgtat gtaattcaag gtgcgaaagt gcaactctgt attccgcagt 2880 cgtttcttag ggttttaatg tgatgatttg taagactgag tgttaaggtt tgaataaaat 2940 tgacacaatt gctct 2955 //