Dbfetch
ID AF020337; SV 1; linear; genomic RNA; STD; VRL; 2157 BP. XX AC AF020337; XX DT 10-MAR-1998 (Rel. 54, Created) DT 10-MAR-1998 (Rel. 54, Last updated, Version 1) XX DE Rice ragged stunt virus segment S6 P6 gene, complete cds. XX KW . XX OS Rice ragged stunt virus OC Viruses; Riboviria; Reoviridae; Spinareovirinae; Oryzavirus. XX RN [1] RP 1-2157 RA Upadhyaya N.M., Li Z., Ramm K., Yang M., Gellatly J.A., Kositratana W., RA Gerlach W.L., Waterhouse P.M.; RT "Rice ragged stunt oryzavirus:complete sequence and genome organization"; RL Unpublished. XX RN [2] RP 1-2157 RA Upadhyaya N.M., Waterhouse P.M., Li Z.; RT ; RL Submitted (20-AUG-1997) to the INSDC. RL Plant Protection, CSIRO Plant Industry, Cnr. Barry Drive and Clunies Ross RL Street, Canberra, ACT 2601, Australia XX DR MD5; d0c00f16c54bdb60363f32a6dd989509. XX FH Key Location/Qualifiers FH FT source 1..2157 FT /organism="Rice ragged stunt virus" FT /chromosome="segment S6" FT /mol_type="genomic RNA" FT /note="Thai-isolate" FT /db_xref="taxon:42475" FT CDS 41..1819 FT /codon_start=1 FT /product="P6" FT /db_xref="GOA:O56045" FT /db_xref="UniProtKB/Swiss-Prot:O56045" FT /protein_id="AAC04675.1" FT /translation="MQLFIVKLDSRSSASNEILVLDINELRKYVSKHQLSFRGAQVHET FT NSEHSVRNWEDDNITMFFHTSNVFPSEKSVRHALFSRNSVHVCGPLNIGAFRDSLRVLQ FT SPQFPIHTYGDDITVFDKLREFVVVPNSLAVVDMDTSAWERYTYSLFTDEPGTITLADE FT TPPTISPTGRDSVSPVARFSPSISISSIAIGEVGSASKRRQRLVKQAKSSDKTPIPEIR FT LNKKDTVFAETGTEQASPKTEIVAATVHKIPVNHAEADKRVVVLKGRTKDKAQEVREVT FT SLARDTTGVEHELMQSVGDDSVQVSGELSGFGDESFEVSKTDVVGVENKQLALDRVPAL FT EPCGEVSEDEELVSEGMYAVPLDLDIYAEKCPSPTPPNSPKKREKADHEPIDISSAMMK FT LRLIAAAFQKEMMAYDKIDCLSSDDPAYLLAQFCLRNLNGVFVPEYVEEHSSDEENADD FT PNQGWNGTPVHGSREIFEKLSESRLASMEMISNVKPIRWNSKKTTYAVTIERGNPNLIV FT TQSLTRGQSSQFRKVIRAFGCSTDYCLERLASRDYDAILMLMSSLSGACHATKSYCYLQ FT IVAYGSFAAPECKELD" XX SQ Sequence 2157 BP; 589 A; 452 C; 552 G; 564 T; 0 other; gataaatcct ctgaaaagga gccaaacctc ttgctttgac atgcagctct tcatagtcaa 60 acttgacagt cgatcgtcgg cttccaacga aattcttgtt ttagacatca acgaattacg 120 taaatatgtt tcgaaacatc aactcagctt tcgcggtgct caagtccacg aaaccaattc 180 ggaacattcg gtgcgtaatt gggaggatga caacattact atgtttttcc acacgtcgaa 240 cgtttttcct tcagaaaaga gtgttagaca cgccttattt tctagaaact ctgtccatgt 300 atgcggcccg ctaaatatag gtgcatttcg cgattccttg cgtgtattac agagtcctca 360 atttccaatc catacttacg gtgacgacat cacggtgttt gataagttga gggaatttgt 420 agttgtgcct aatagtttag cagttgtaga catggacact tcagcctggg agcgttacac 480 ctactcgctc ttcacagatg agcccggaac gataactctg gcagacgaaa cgccacctac 540 tatcagccca acaggacgag attccgttag cccagtagct agattctcac cttcgatttc 600 aatctcaagc atcgctattg gtgaagttgg ttcggcaagt aaacgtaggc aaagattggt 660 taagcaggcc aagtcgtctg acaagactcc tattccggag attcgtctaa acaagaagga 720 tacagtgttt gctgagactg gtactgagca agctagtccc aagaccgaaa tcgtggctgc 780 cacagttcat aaaattcctg tcaatcatgc cgaggcggat aaacgcgtag tggtcttgaa 840 gggtcggaca aaagataaag cccaagaggt tagagaggta acgagtttag cgagagatac 900 aactggtgtg gaacatgagt tgatgcaatc agtcggtgat gatagtgtgc aagtgagcgg 960 tgaattgagc ggcttcggtg acgagtcctt cgaagtgtcg aaaacggatg ttgtcggagt 1020 agagaacaag caattggccc ttgatcgagt accagcactt gagccctgtg gggaggtgag 1080 tgaggacgag gagttagtgt cagagggaat gtacgctgta ccattagatt tggatattta 1140 tgctgagaaa tgtcctagcc cgacgccccc caatagtccg aagaagcgtg agaaggcgga 1200 ccatgagcca atagatattt cctcagcgat gatgaagcta agattgatcg ctgcggcgtt 1260 ccagaaggag atgatggctt atgataaaat agattgcctc agcagtgatg atccagccta 1320 cctacttgct caattctgcc ttagaaattt gaatggtgtg ttcgtgcccg agtacgttga 1380 ggaacacagt agtgatgagg agaatgcgga tgatcctaac caaggctgga atggtacacc 1440 ggttcacggt agtcgtgaga tctttgagaa attgagcgag tctaggttgg cgtctatgga 1500 aatgatatca aatgtgaaac cgattcgctg gaacagcaag aagacgactt acgctgtcac 1560 tattgagcgt ggaaatccaa atttgatcgt aacgcagtct ctgacgcgtg gccaatcatc 1620 tcaatttcga aaggtaatcc gtgcgttcgg ctgttcaact gactactgct tagagcgatt 1680 agcgtctcgt gattatgatg ctattcttat gttaatgtca agcctaagcg gagcatgcca 1740 tgctacaaag tcgtattgct accttcaaat tgtcgcttat gggagtttcg ccgcacctga 1800 atgtaaggag cttgattgat tcaccatttg catctttcaa gtgttacagt gccgtccctc 1860 atgaaatgcc acgacctcca accgtctaaa ggaaagcggg tcgctgcatt tgcagataag 1920 ttgatgcttg aaacctatct acgtaagtga agccgccact ttaaggatac gtcggctatg 1980 cttgaaacag tgtcaacaac aaacgccttt ccgttccgtg tggttgtgtt attagtgtca 2040 atgtctggta taggtcttgt aatacgaccg attatcgact agagagaatg gcacgaggac 2100 tgtgtcttgg gtaaggtaag ggctccgagg tgccactagg aggagatgga gaggtgc 2157 //