Dbfetch
ID AF013994; SV 1; linear; genomic RNA; STD; VRL; 2970 BP. XX AC AF013994; XX DT 07-JAN-1998 (Rel. 54, Created) DT 14-NOV-2006 (Rel. 89, Last updated, Version 5) XX DE Peanut yellow spot virus nonstructural protein and nucleocapsid protein DE genes, complete cds. XX KW . XX OS Peanut yellow spot virus OC Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Ellioviricetes; OC Bunyavirales; Tospoviridae; Orthotospovirus. XX RN [1] RP 1-2970 RX DOI; 10.1007/s007050050291. RX PUBMED; 9541618. RA Satyanarayana T., Gowda S., Reddy K.L., Mitchell S.E., Dawson W.O., RA Reddy D.V.; RT "Peanut yellow spot virus is a member of a new serogroup of Tospovirus RT genus based on small (S) RNA sequence and organization"; RL Arch. Virol. 143(2):353-364(1998). XX RN [2] RP 1-2970 RA Satyanarayana T.; RT ; RL Submitted (12-JUL-1997) to the INSDC. RL Plant Pathology, CREC, 700 Experiment Station Road, Lake Alfred, FL 33850, RL USA XX DR MD5; f33de69774b0302de23536a42396ca25. DR EuropePMC; PMC2828552; 20151164. DR EuropePMC; PMC3371012; 22715400. DR EuropePMC; PMC3388970; 21182398. DR EuropePMC; PMC4262298; 25506310. DR EuropePMC; PMC4263035; 25465801. DR EuropePMC; PMC4326804; 25540203. DR EuropePMC; PMC4439075; 25993336. XX FH Key Location/Qualifiers FH FT source 1..2970 FT /organism="Peanut yellow spot virus" FT /chromosome="S" FT /mol_type="genomic RNA" FT /db_xref="taxon:63443" FT repeat_region 1..22 FT /rpt_type=INVERTED FT /note="imperfect, terminal repeat" FT CDS 58..1500 FT /codon_start=1 FT /product="nonstructural protein" FT /note="ORF 1" FT /db_xref="InterPro:IPR004915" FT /db_xref="UniProtKB/TrEMBL:O55842" FT /protein_id="AAB94021.1" FT /translation="MSEMNSEKGKIIIPKEYDPEYCRQALLSHGSQVEKASSLDVYTIY FT EKNTLAFESIHITNPKFKVSSGYGTSGYVLNKDKVDASAEDLKLHNLETSTDSQDFYDS FT FNGPSGVDSTISLTGPEIVITISHPKQSAYAYKHNFHGRIAVNGEAKAMISDFKEFVDV FT YSSNPYNFLYNPKILNIEETSSTILFPVEQIGTLPSTISVFGRYFDKNHFSVVDANKYM FT SVKAVSDGAKYSNQGSHRQLHNKNLKAIEIASVSGIMPNTISKTTMQTKKNCTVYIQVQ FT VLDPSCKPEKKECLIQAKDDPYQRLVYCKSECLGQTKPGISTFLFKIICLDCTQSEVSH FT PTTYFAGALSTCLDLEEMPSLVRPASANLNAMVDTDREKINEIICKNLVAVHLELAQDI FT SKKLNKPINVFTIKDTSNMTGDTVDVNGKKFRILKDSSGDCYFTSATFEKTFIGAYKSC FT QTFIDYCDSKKLSINGDNVFIF" FT CDS complement(1086..1292) FT /codon_start=1 FT /product="ORF3" FT /db_xref="GOA:O55843" FT /db_xref="UniProtKB/TrEMBL:O55843" FT /protein_id="AAB94023.1" FT /translation="MVKTLIGLFNFLEISCANSRWTATRFLHMISFIFSLSVSTIAFRL FT ADAGLTREGISSKSRQVERAPAK" FT CDS complement(2154..2894) FT /codon_start=1 FT /product="nucleocapsid protein" FT /note="ORF 2" FT /db_xref="GOA:O55844" FT /db_xref="InterPro:IPR002517" FT /db_xref="UniProtKB/TrEMBL:O55844" FT /protein_id="AAB94022.1" FT /translation="MSTKGVVKVKNDRELFESLSKNAKVELEQEQISFTFKTFFDSKSS FT KVDLTEANMVLYINSANRLKLIGKENNAKTFLNINIVKSSPGVDEFTWSRLDSVIRMKY FT IDRIKDYNEDKLKAESAKLNNWLLEIFNLKQMSPKDEVIFKVITGGNLNHLMCFKTTFA FT HAFAIANYQHKRAEQLGITNFDTKAQLDRMIVIGERNKVLPSTAPLTLINQYFKNAMPK FT VKAAERDQSSKYEELQAAIGNGEL" FT repeat_region 2949..2970 FT /rpt_unit_seq="inverted" FT /note="imperfect, terminal repeat" XX SQ Sequence 2970 BP; 964 A; 556 C; 511 G; 939 T; 0 other; agagcaatcg gggcataaaa taaaaacaca taaactctat attctctaat ttcaatcatg 60 tcagagatga attcagaaaa aggaaaaatc ataatcccaa aggagtatga cccagaatac 120 tgcagacaag cattgctgtc tcatggcagt caagttgaaa aagcttcttc tctagatgtt 180 tacaccattt atgagaagaa cactttggca tttgaatcca tccacatcac taacccaaag 240 tttaaggttt catcaggcta tggcacttct ggatatgtct tgaacaaaga caaggttgat 300 gcttcagcag aagacttaaa gcttcataac ttggaaacat ccacagacag ccaggacttc 360 tatgattcct tcaatggtcc atcaggtgtg gactcgacca taagtcttac tgggcctgaa 420 attgttatta caatttcaca tccaaagcaa tctgcttatg cttataaaca caatttccat 480 ggtaggattg ctgttaatgg tgaagctaaa gccatgatat cagattttaa agaatttgtt 540 gatgtgtact ccagcaatcc ttacaatttc ttgtataatc caaagatctt gaacattgag 600 gagactagta gcacaatact gtttcctgtg gagcagatcg gaacacttcc ttcaaccatt 660 tcggtgtttg gcaggtactt tgacaaaaac catttctcag ttgttgatgc caacaaatat 720 atgtctgtca aagcagtgtc tgatggtgca aagtactcta atcaaggttc ccacagacaa 780 cttcataaca agaacttgaa agctatagag atagcttcgg tgtctgggat catgccaaac 840 actatttcca aaactacaat gcaaacaaag aagaattgca ctgtttacat ccaggttcaa 900 gtcctcgatc cttcttgcaa gcctgaaaaa aaggaatgct tgatccaagc taaagatgac 960 ccttaccaga gacttgttta ttgcaaatct gaatgcttag gtcaaactaa gccaggcatt 1020 tctacgtttt tgttcaagat catttgtctt gactgcactc aatcagaggt ttctcaccct 1080 acaacctact ttgctggagc tctttcaact tgcctagatt tggaagaaat gccttctctc 1140 gttagacccg catcagctaa cctgaatgct atggttgaca ctgacagaga gaagataaat 1200 gagatcatat gcaaaaatct ggtggcagtc catcttgaat tggcacaaga tatttctaag 1260 aaattgaaca agcctattaa tgttttcacc atcaaggata cttctaatat gactggagat 1320 acagtggatg taaatggcaa aaagttcaga attttgaaag actcttcagg ggactgctac 1380 tttacatcag ccacgtttga aaagaccttt atcggagcct ataaatcttg tcaaacattt 1440 attgattact gtgacagtaa gaagcttagc ataaatggtg ataatgtttt catcttttga 1500 atcagacatt ttcgtagggt aggatttcaa attttgaata aattgaaaag aaaaggaata 1560 aatacaaaaa acaaaaaaat caaaaaaatg ataaaaccaa ataaaaaaat taataaaaac 1620 aaaaacaaaa aaagaggact tcggtcccac acttggcaaa gatataacgg ctatcaagga 1680 ctggtctaaa cagtttaaag aatgtttaaa ttattgatta atcaaataag atgcagtaat 1740 ttaaaagaag acctttctaa tattcgagct tgaatcaaac agtcactcaa ctttgaaatc 1800 atattaaata tttgtgacca gtttctagat tatttggata atttagacca attttgggga 1860 tttctccctc ttttttttag gttttcactt ttttgatttt tttggttttt gtattttata 1920 atgtctttaa cacacataaa tctgatttaa acagacaagc acactttaac atttgcacaa 1980 tagtgctgag gtagcttaca ggtaacatag tttgacatca ggtaacatag cttagaaatg 2040 cataaatata aacacttctt tatcagaaga taagagaaaa gaagctgaat tataacagat 2100 aaatgcaatt taagtactag taaacctttg gcatcaatag atgtcttgtc agttcacagc 2160 tctccgttac ctatagctgc ctgaagctct tcatatttgg aagactgatc cctttcggca 2220 gccttgactt ttggcatggc atttttgaaa tactgattga tcaaagtcag tggggcagtt 2280 gatggcaaaa ctttattgcg ttcacctatc actatcattc tatcaagctg agccttagta 2340 tcaaagtttg tgataccaag ctgctcagct cttttgtgct gataatttgc aattgcaaag 2400 gcatgtgcaa aagttgtttt gaagcacatc agatggttca aattgccacc agttatgact 2460 ttgaagataa cctcatcttt tggtgacatc tgtttcaagt tgaaaatctc caaaagccag 2520 ttattcaatt ttgcgctttc agctttcagc ttgtcctcat tgtaatcctt gattctgtca 2580 atatatttca tccttatcac agaatccaac ctgctccaag taaactcatc tacgcctggt 2640 gagcttttca caatatttat attcaagaat gtcttggcat tgttctcctt accgatgagc 2700 ttcaatctat tggcactatt gatgtaaagc accatattgg cctcagtcaa atcaacttta 2760 gagcttttgc tatcgaagaa agtcttaaaa gtgaaagata tctgctcttg ctcaagctca 2820 accttagcat ttttggaaag agattcaaag agttctctgt cattctttac ctttacaacg 2880 ccttttgtag acatctttgc tttggtttct gatttgatta gactatgctg tagattttag 2940 ttgaattatt atttttgcct tgattgctct 2970 //