Dbfetch
ID AF013285; SV 1; linear; genomic RNA; STD; VRL; 1652 BP. XX AC AF013285; XX DT 18-MAY-1998 (Rel. 55, Created) DT 26-NOV-2003 (Rel. 77, Last updated, Version 2) XX DE Prunus necrotic ringspot virus Mission RNA3 putative movement protein (3a) DE and coat protein (3b) genes, complete cds. XX KW . XX OS Prunus necrotic ringspot virus OC Viruses; Riboviria; Bromoviridae; Ilarvirus. XX RN [1] RP 1-1652 RX DOI; 10.1023/A:1008668129926. RX AGRICOLA; IND21237856. RA Scott S.W., Zimmermann M.T., Ge X., MacKenzie D.J.; RT "The coat proteins and putative movement proteins of isolates of Prunus RT necrotic ringspot virus from different host species and geographic origins RT are extensively conserved"; RL Eur. J. Plant Pathol. 104(2):155-161(1998). XX RN [2] RP 1-1652 RA Scott S.W., Zimmerman M.T., Ge X., Mackenzie D.J.; RT ; RL Submitted (10-JUL-1997) to the INSDC. RL Plant Pathology and Physiology, Clemson University, P.O. Box 340377, RL Clemson, SC 29634-0377, USA XX DR MD5; 98592a1b912a819ad007181e339f972c. DR EuropePMC; PMC1472603; 16731922. XX FH Key Location/Qualifiers FH FT source 1..1652 FT /organism="Prunus necrotic ringspot virus" FT /chromosome="RNA3" FT /isolate="Mission" FT /mol_type="genomic RNA" FT /db_xref="taxon:37733" FT CDS 23..874 FT /codon_start=1 FT /gene="3a" FT /product="putative movement protein" FT /db_xref="GOA:O70914" FT /db_xref="InterPro:IPR002538" FT /db_xref="UniProtKB/TrEMBL:O70914" FT /protein_id="AAC16498.1" FT /translation="MADVSKNPSTSDFSVVECSMDEMSQISEDLHKLMLSDEMKALPTK FT GCHILHLVNLPKSNVLRLASKEQKGFLSRQADKVKNKIYRCVGRIFLVYVPIIQATTSG FT LITLKLQNSDTGEISDVVTDVEANRAFVIMDRWGRSLVESADLNLLYYISCPDVRPGAR FT VGEMMAFWDERMSRQQTYLEKGNLILFPIAETKPSKYLNDKKVLMSMVRSRILAGTEGC FT DIAPENIEVKRLGDNRKVLTIQPKAPIVEEVKEKDEPTGSNGESHMEEKTVTVKVGSSG FT NA" FT CDS 949..1623 FT /codon_start=1 FT /gene="3b" FT /product="coat protein" FT /db_xref="GOA:O70915" FT /db_xref="InterPro:IPR002681" FT /db_xref="UniProtKB/TrEMBL:O70915" FT /protein_id="AAC16499.1" FT /translation="MVCRICNHTHAGGCRSCKKCHPNGALVPLRAQQRAANNPNRNPNR FT ASSGYRTVVRPQPVVKTIWTVRGPNVPPRIPKGFVAHNHREVTTTEAVKYLSIDFTTTL FT PQLMGQNLTLLTVIVRMNSMSSNGWIGMVEDYKVEQPDGPNALSRKGFLKDQPRGWQFE FT PPSDLDFDTFARTHRVVIEFKTEVPAGAKVLVRDLYVVVSDLPRVQIPTDVLLVDEDLL FT EI" XX SQ Sequence 1652 BP; 451 A; 336 C; 442 G; 423 T; 0 other; gttggttgaa tagtgtttca gtatggccga tgtcagtaaa aacccctcca ctagtgattt 60 ttcagtagtg gagtgttcta tggacgaaat gagccagata tcagaggatt tgcataaact 120 tatgctatcc gatgagatga aggcgttacc aacgaaaggt tgtcatatcc tgcatttggt 180 taacctcccg aaatccaatg tactaagatt agcgagcaag gaacagaaag gtttcctctc 240 gcgacaggcc gataaagtaa agaataagat ttacagatgt gtaggccgca tattcctcgt 300 ttatgtaccg atcatacagg caacgacttc gggcttaata acccttaagt tgcagaactc 360 cgatacagga gaaatttcag acgtcgtgac agacgtcgaa gccaatcgcg cctttgttat 420 tatggacaga tggggaagat ctctggtaga gtcagcagac ttgaatctgt tgtattatat 480 ttcatgtccg gacgtccgac ctggagccag agtgggagag atgatggctt tttgggatga 540 gaggatgtcg aggcagcaga cttacttgga gaaagggaat cttattttat tcccgattgc 600 cgagacaaaa ccttcgaaat atcttaatga taagaaggtt ttgatgtcga tggtccgaag 660 taggatattg gcaggtacag aagggtgcga tatagccccc gagaatatag aagttaaacg 720 attaggggac aatagaaagg ttttgaccat tcaaccgaaa gccccgattg tagaggaagt 780 taaggaaaaa gatgaaccga caggttcgaa tggtgaaagt catatggaag agaagactgt 840 gaccgttaag gtcggtagtt ctggaaatgc ttgagtgact gtgtcacgag cgtgcgcctt 900 tgcgcgagcg tttttctttc tttcttccga atttcttttc acccaacaat ggtttgccga 960 atttgcaatc atacccacgc tggtggatgc cgttcttgca agaagtgcca tccgaatgga 1020 gctctggtcc cactcagggc tcaacagagg gctgcgaata acccgaatag aaacccgaat 1080 agggcttcga gtgggtaccg gacagtggtc cgaccacaac cggtcgtgaa gaccatctgg 1140 accgtgagag gtccgaatgt ccctccccga attcctaagg ggtttgtagc acacaatcac 1200 cgagaggtga cgacgacaga ggcagtgaag tacttgagca tagacttcac gaccactctc 1260 cctcagttga tgggtcagaa tttgacccta ttgactgtta tagtccgaat gaactctatg 1320 agttcgaatg gttggattgg gatggtggag gactataagg tggaacaacc tgatggtccg 1380 aatgccctgt ctaggaaggg gttcttgaag gaccaaccga gaggttggca gttcgaacct 1440 ccttccgatt tagatttcga cacttttgcg cgtacgcatc gtgtcgttat cgaattcaag 1500 accgaagtgc ccgctggggc caaggtcttg gttagggatt tgtacgtagt ggtaagcgat 1560 ttaccacgag tgcaaattcc gactgatgtc ttgctggtcg atgaagacct gcttgagatc 1620 tagagtgaga taagcacact cgaatttctc cg 1652 //