ID   AF006073; SV 1; linear; mRNA; STD; VRL; 1927 BP.
XX
AC   AF006073;
XX
DT   14-JUL-1997 (Rel. 52, Created)
DT   05-JUN-2011 (Rel. 109, Last updated, Version 3)
XX
DE   Thogoto virus segment 3 PA polymerase subunit mRNA, complete cds.
XX
KW   .
XX
OS   Thogoto thogotovirus
OC   Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Insthoviricetes;
OC   Articulavirales; Orthomyxoviridae; Thogotovirus.
XX
RN   [1]
RP   1-1927
RX   DOI; 10.1016/S0168-1702(97)00072-5.
RX   PUBMED; 9282786.
RA   Leahy M.B., Dessens J.T., Weber F., Kochs G., Nuttall P.A.;
RT   "The fourth genus in the Orthomyxoviridae: sequence analyses of two Thogoto
RT   virus polymerase proteins and comparison with influenza viruses";
RL   Virus Res. 50(2):215-224(1997).
XX
RN   [2]
RP   1-1927
RA   Leahy M., Dessens J.T., Weber F., Kochs G., Nuttall P.A.;
RT   ;
RL   Submitted (30-MAY-1997) to the INSDC.
RL   Institute of Virology and Environmental Microbiology, NERC, Mansfield Road,
RL   Oxford OX1 3SR, Great Britain
XX
DR   MD5; 663c29d74fc6166704415a781021535e.
DR   EuropePMC; PMC114495; 11533190.
DR   EuropePMC; PMC1563815; 16873236.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1927
FT                   /organism="Thogoto thogotovirus"
FT                   /segment="3"
FT                   /mol_type="mRNA"
FT                   /note="THORNA3-D00540"
FT                   /db_xref="taxon:11569"
FT   CDS             21..1889
FT                   /codon_start=1
FT                   /product="PA polymerase subunit"
FT                   /note="THOV PA"
FT                   /db_xref="GOA:P27194"
FT                   /db_xref="InterPro:IPR001009"
FT                   /db_xref="InterPro:IPR038372"
FT                   /db_xref="PDB:4CGX"
FT                   /db_xref="PDB:4CHC"
FT                   /db_xref="UniProtKB/Swiss-Prot:P27194"
FT                   /protein_id="AAB62893.1"
FT                   /translation="MTDRPDHIDSRVWELSETQEDWITQVHGHVRRVVECWKYTICCLI
FT                   SNMHTHRGAPQYDVFKWQDRSTIEWICSKKKVQYPERDTPDLYDNERAVAYKVLLVSDL
FT                   SDHSPTSGIYHDLAFNLEGEAEESCALVLRGSQLQDIKGFLCRALEWVVSNNLTQEVVE
FT                   TISGEAKLQFSVGTTFRTLLKRDTDWDVIPTPRVEPNVPRIEGRRWTQMKKLPLLKEKE
FT                   GPPSPWRALLLGADSEYIVCPPGTDQEAISWIHSQSEIECIRESKSTPASVITCLTSSL
FT                   QSFAEGNPVRSRIHEDIIAFGINKKQEKKQSASSSASGEWKRAEYQVEEMSLPPWVEEE
FT                   MVLLRSDQEDNWIELEKNAIYTEVDGVAEGLVDKYIEIVGRTKVASVIEKWQIAATRTF
FT                   SQLHTDRSRITACPIITRDPSGNCQFWGMVLLGPHHVKRDTDNAPLLIAEIMGEDTEEK
FT                   YPKHSVFSLKVEGKQFLLSLKITSFSRNKLYTFSNIRRVLIQPASIYSQVVLSRAAENN
FT                   SLNLEVNPEIQLYLEGAQRGMTLYQWVRMILCLEFLMAIYNNPQMEGFLANMRRLHMSR
FT                   HAMMERRQVFLPFGSRPEDKVNECIINNPIVAYLAKGWNSMPNVYY"
XX
SQ   Sequence 1927 BP; 619 A; 422 C; 475 G; 411 T; 0 other;
     agcaaaaaca agcacttgac atgacagaca ggcccgacca catagacagc agagtatggg        60
     agctgtcaga aacacaggaa gactggatca cccaagtcca cggacacgtc aggagagtgg       120
     tagaatgctg gaaatacacc atatgctgtc tgataagcaa catgcacact cacaggggag       180
     caccacaata tgatgtcttc aagtggcagg acaggagcac catagaatgg atatgtagca       240
     agaaaaaagt ccaatacccg gaaagagaca caccagatct gtatgacaat gaacgggcag       300
     ttgcatacaa ggtacttctg gtttctgatc tctctgacca ttctcctaca tcaggcattt       360
     accacgacct agccttcaat ttagaagggg aggcagaaga atcttgtgca ttggtgctaa       420
     gagggagcca actgcaagac ataaaggggt ttttgtgcag ggcactggaa tgggttgtgt       480
     caaacaatct aacacaggag gttgtggaaa ctatcagtgg ggaggccaag ctccaatttt       540
     ctgtaggcac cactttcagg accttactga agagagacac agattgggat gtgataccta       600
     ctcccagagt agaacccaat gtcccaagga ttgaaggaag gaggtggaca cagatgaaga       660
     aacttccttt gctaaaagaa aaagagggcc cacccagccc atggagggct ctattgctgg       720
     gagcagactc agaatacatc gtgtgtcccc ccggaacaga ccaagaggcc atctcttgga       780
     tacactctca gtctgagatt gaatgcatta gggaatccaa atctacccca gcatcagtca       840
     tcacctgcct aacgtcaagc cttcaatcat ttgcagaggg gaacccagtg agatctagga       900
     tacacgaaga catcattgca tttggcataa acaaaaagca agagaagaag cagtctgctt       960
     catcttcagc ctctggagag tggaaaagag cagaatatca agtggaagaa atgtccttgc      1020
     caccctgggt agaggaagag atggtcctac tcaggagtga ccaggaagac aactggatag      1080
     agctagagaa aaatgcgatt tacactgagg ttgatggagt agcagaaggg ctggtggaca      1140
     agtacataga gatagtgggc agaacaaaag tggcatctgt catagaaaaa tggcaaattg      1200
     ctgccacccg gaccttctca caactgcaca ccgatcgtag cagaattaca gcttgcccca      1260
     taatcaccag agacccatca ggcaattgcc aattctgggg gatggtgctg cttgggcccc      1320
     atcatgtaaa gagagacaca gacaatgctc cgctgcttat agcggagata atgggagaag      1380
     acacagaaga gaagtaccct aagcacagcg tattttctct aaaggttgaa gggaaacagt      1440
     ttctgctctc tctgaagata acctcttttt cgaggaataa actgtacaca ttctccaaca      1500
     ttagaagagt tttgatacag ccagcatcaa tttactcaca agttgtactc tctagggcag      1560
     ctgagaacaa cagcctcaat ttagaggtaa acccagagat ccagctgtac ctagaaggcg      1620
     ctcagagggg gatgactctc taccaatggg tccggatgat cctatgtttg gaatttctga      1680
     tggcaattta caacaaccct cagatggaag gctttcttgc aaacatgaga cgactccata      1740
     tgtccaggca tgccatgatg gaaagaagac aggtcttcct accttttggg tcaagaccag      1800
     aagacaaagt taacgagtgc ataatcaaca acccaatagt ggcttatttg gcaaaaggct      1860
     ggaacagcat gcctaatgtg tactactaga gaggggtatt gcaagaaaaa agtgctttga      1920
     tttctct                                                                1927
//