ID   AF004985; SV 1; linear; mRNA; STD; VRL; 2212 BP.
XX
AC   AF004985;
XX
DT   04-JUL-1997 (Rel. 52, Created)
DT   05-JUN-2011 (Rel. 109, Last updated, Version 3)
XX
DE   Thogoto virus segment 2 PB1 protein mRNA, complete cds.
XX
KW   .
XX
OS   Thogoto thogotovirus
OC   Viruses; Riboviria; Negarnaviricota; Polyploviricotina; Insthoviricetes;
OC   Articulavirales; Orthomyxoviridae; Thogotovirus.
XX
RN   [1]
RP   1-2212
RX   DOI; 10.1016/S0168-1702(97)00072-5.
RX   PUBMED; 9282786.
RA   Leahy M.B., Dessens J.T., Weber F., Kochs G., Nuttall P.A.;
RT   "The fourth genus in the Orthomyxoviridae: sequence analyses of two Thogoto
RT   virus polymerase proteins and comparison with influenza viruses";
RL   Virus Res. 50(2):215-224(1997).
XX
RN   [2]
RP   1-2212
RA   Leahy M.B., Dessens J.T., Weber F., Kochs G., Nuttall P.A.;
RT   ;
RL   Submitted (21-MAY-1997) to the INSDC.
RL   Institute of Virology and Environmental Microbiology, NERC, Mansfield Road,
RL   Oxford OX1 3SR, UK
XX
DR   MD5; 6c364216b9f10eb22526e47aa3f4f5ee.
DR   EuropePMC; PMC104458; 9971796.
DR   EuropePMC; PMC114495; 11533190.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..2212
FT                   /organism="Thogoto thogotovirus"
FT                   /segment="2"
FT                   /mol_type="mRNA"
FT                   /db_xref="taxon:11569"
FT   CDS             26..2158
FT                   /codon_start=1
FT                   /product="PB1 protein"
FT                   /function="polymerase"
FT                   /db_xref="GOA:O41353"
FT                   /db_xref="InterPro:IPR001407"
FT                   /db_xref="InterPro:IPR007099"
FT                   /db_xref="UniProtKB/Swiss-Prot:O41353"
FT                   /protein_id="AAC25959.1"
FT                   /translation="MNLFTPRSEINPTTTQELLYAYTGPAPVAYGTRTRAVLENIIRPY
FT                   QYFYKEPNVQRALDIKTGCKEPEDINVEGPSSGFHTASVLKLADNFFRKYRPAMEKLKY
FT                   WILVKLPKLKYAELSKGRQTYSFIHKRNLPAPIALEETVEFLEQNLRRKIGPTLLSYCQ
FT                   AIADVMELDETTYEGARDPRPWDIQLEEIDSDEEDPLFRQVGREETYTIKFSREELWDQ
FT                   MRTLNTMCKHLERGRLNRRTIATPSMLIRGFVKIVEDAAKEILENVPTSGVPVGGEEKL
FT                   AKLASKQTFHTAVTGELSGDQEKFNECLDPDAMRLMWTVFLRKLGCPDWIMELFNIPFM
FT                   VFKSKLADMGEGLVYTKGKLTDRKPLGEMPSEFDDLVRNVVGNSISCRLGMFMGMYNLT
FT                   STLLALISIEREELTGSHVESSDDFIHFFNCKTHEEMFKQAETLRLTLKLVGINMSPSK
FT                   CILISPAGIGEFNSKFHHRDFVGNVATELPALVPNGTNPMTDLAMGLNVIKHSVNTGQM
FT                   NLCTGALAMRIFNHAYKYAYMALGVTRRTRFMEENAITPLLTNQGASPVHSFSTMHLDE
FT                   VALRRHLGLLDEETLRRILNPNNPVTQKGDPSMFFRIENKMPQIMEDYSVPSCFKYTLS
FT                   RNRTIQDKPHKALLNKEERYQRVTSIINKLFPEVLIQEASAPGTVRESLKRRLELVVER
FT                   SDLDEERKKRILSRIF"
XX
SQ   Sequence 2212 BP; 708 A; 514 C; 532 G; 458 T; 0 other;
     agcaaaaaca ggcgctccaa acacaatgaa cctgttcacc ccacgctcag agatcaatcc        60
     caccaccact caggagctac tatacgccta cacaggaccg gcgcccgttg cttatggcac       120
     aagaaccaga gcagtattag agaacataat cagaccttac caatacttct acaaagaacc       180
     caatgtccag agagctctag acatcaagac aggatgcaag gagccagaag atataaatgt       240
     ggaaggtcct agcagtggat ttcacaccgc aagtgtgtta aagctagctg acaatttctt       300
     tagaaaatac aggcctgcta tggaaaaatt gaagtactgg atacttgtaa agcttccgaa       360
     gctcaagtat gcagagctga gcaagggcag gcagacctac agttttatac acaaaaggaa       420
     cctcccagca cctatcgccc tagaagagac agtggagttc ttagaacaaa atctaagaag       480
     aaaaataggc ccaaccctcc tatcttactg ccaggcgatt gcagacgtga tggagctaga       540
     tgagaccact tatgaaggcg cgagagatcc caggccctgg gacatccagc tagaagagat       600
     cgactcagat gaagaagacc ctctgttcag acaagtaggt agggaagaga cctacaccat       660
     caagttcagc agagaagaac tatgggacca gatgagaacc ttgaatacta tgtgcaaaca       720
     cctagagaga gggaggttaa acagaaggac catagctacc cccagcatgt tgataagagg       780
     gtttgtaaaa attgtagagg atgcagccaa agagatcctc gagaatgtcc ctacctctgg       840
     agtgccagtg ggaggagaag aaaaattggc caagctcgcc agcaagcaaa cctttcacac       900
     agcagtcaca ggagagctga gcggcgatca agaaaagttc aatgagtgtt tggacccaga       960
     tgcaatgcgc ctcatgtgga ccgtgttctt gagaaagcta gggtgccctg actggataat      1020
     ggagttgttc aatataccat ttatggtatt caagtcaaag ttagcagaca tgggagaagg      1080
     attagtatac accaaaggga aactcactga cagaaaacca ttgggagaaa tgccttcaga      1140
     gtttgacgat cttgtgagga atgtggtggg caacagcatt tcgtgcaggc tgggaatgtt      1200
     catgggaatg tacaacctca cgtcgactct gcttgcactg atctcaatag agagagaaga      1260
     gctcacagga tcgcacgtgg agagtagtga tgacttcatc cacttcttca actgcaagac      1320
     acatgaagag atgttcaaac aggcggagac actccgactg actttgaaac tagttggcat      1380
     caacatgtct ccttccaaat gcatattgat cagccctgca gggataggag agttcaactc      1440
     caaattccat caccgtgact ttgtggggaa cgtggccacc gaactaccag cattggttcc      1500
     gaatgggaca aacccaatga cagacttggc aatgggccta aatgtgatca agcattctgt      1560
     caacaccggt caaatgaacc tatgcactgg agcattagcc atgagaatct tcaaccatgc      1620
     ctacaaatat gcatatatgg cattaggggt aaccagaagg acccgattca tggaagaaaa      1680
     tgcaatcacc cctctgctga caaatcaggg ggcctcccca gtacacagct tctccaccat      1740
     gcatctggac gaagtggcac tcagacgcca tctgggcctt ctagacgaag agaccctgag      1800
     gagaatactg aacccgaaca acccagttac tcaaaagggg gacccttcca tgttctttag      1860
     aatagagaac aagatgcccc agatcatgga agactacagt gtgcctagct gctttaaata      1920
     caccttgtct cggaatagaa ccattcagga caaaccccac aaggctttac taaacaaaga      1980
     agagagatat caaagagtga cctctatcat aaacaagctg ttccccgagg tgctcatcca      2040
     agaggcatct gctccaggca cggtcagaga gagccttaag agaaggcttg agctggtggt      2100
     ggagaggtct gacctggacg aggagaggaa gaagaggatc ctttccagga tcttctgaat      2160
     gggcacatca ctacactagt tttcttttgt aaaaaagcgc cttgatttct ct              2212
//