ID   AB796394; SV 1; linear; genomic RNA; STD; VRL; 1733 BP.
XX
AC   AB796394;
XX
DT   15-MAR-2013 (Rel. 116, Created)
DT   30-SEP-2013 (Rel. 118, Last updated, Version 2)
XX
DE   Gentian Kobu-sho-associated virus gene for hypothetical polyprotein,
DE   putative RNA-dependent RNA polymerase domain, partial cds, isolate: Ty5.
XX
KW   .
XX
OS   Gentian Kobu-sho-associated virus
OC   Viruses; Riboviria; dsRNA viruses.
XX
RN   [1]
RP   1-1733
RA   Atsumi G., Sekine K.T.;
RT   ;
RL   Submitted (07-MAR-2013) to the INSDC.
RL   Contact:Go Atsumi Iwate biotechnology research center; 22-174-4 Narita,
RL   Kitakami, Iwate 024-0003, Japan URL    :http://www.ibrc.or.jp
XX
RN   [2]
RX   DOI; 10.1099/vir.0.053637-0.
RX   PUBMED; 23907397.
RA   Atsumi G., Tomita R., Kobayashi K., Sekine K.;
RT   "Prevalence and genetic diversity of an unusual virus associated with
RT   Kobu-sho disease of gentian in Japan";
RL   J. Gen. Virol. 94(Pt 10):2360-2365(2013).
XX
DR   MD5; 5edda109ccfd01e837bacba1bbca6606.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1733
FT                   /organism="Gentian Kobu-sho-associated virus"
FT                   /host="Gentiana triflora"
FT                   /cultivar="Giovanni"
FT                   /isolate="Ty5"
FT                   /mol_type="genomic RNA"
FT                   /country="Japan:Iwate, Morioka, Tamayama"
FT                   /isolation_source="Kobu-sho-affected stem"
FT                   /collection_date="2009"
FT                   /db_xref="taxon:1150353"
FT   CDS             <1..>1733
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="hypothetical polyprotein"
FT                   /note="putative RNA-dependent RNA polymerase domain"
FT                   /db_xref="GOA:M4ZUL5"
FT                   /db_xref="InterPro:IPR002166"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:M4ZUL5"
FT                   /protein_id="BAM99935.1"
FT                   /translation="VCRDKVETKAKKNIDNGRLLIPDCTDEIDPRGKSYKYLPYTKKEE
FT                   ARRARQDKLRQASNIAPRNIRFAEFVQRFADLIILGPVQKYHAHKEKLYYGSSTGTPLW
FT                   RLGNLTKALHDVYAPRHQQEFWESSELGCDVCGYYNNSSCSCLIVDGKLCQVHGLKHGE
FT                   TQSSKCKECKTHRGDSANEQEWFKNIMNNKTELLSEQAYIRMYDPSFRKGLERKALKAM
FT                   IASGDFSGFDGTVSKTDLVLNYIFYKNIYRSEYHLMLKTRWEHWMWALVINDHGHVIVS
FT                   DGQRSSGDQDTSFGNTMINGIYHFASTALSLGISIEEAATPIGEVWFRSDFDYTTPKYK
FT                   KLYLHRISHISDGDDNLHFGSKEDIEKFDKNGPMLLERAGKKIRCGTRSGYDLTESYSG
FT                   ISYCSHNYNRCRIGKISTPVEMAEMSGVAEMVPIDCVPKTFKKVDNDNLPLQHLRDKKL
FT                   GLRVEYMPARAMSEVIGKLVMTMKGSTANMDFTRDYGSSTKEQKRGQKNEEAIAITRGK
FT                   LLSYLLNYCQYSVVRILVMSAFSIIGDGVCNLQELKRRYNVPSIAKTIGSALRGVFNIS
FT                   TL"
XX
SQ   Sequence 1733 BP; 567 A; 358 C; 433 G; 375 T; 0 other;
     gtatgtagag ataaagtgga gactaaggcc aaaaagaaca tcgataatgg tcgtctacta        60
     ataccagatt gtacggacga gattgacccg agagggaaat cgtacaagta cttgccttat       120
     acaaagaagg aagaggctag aagagccagg caggataagc tgagacaggc gagcaatatc       180
     gcgccaagga acatccgctt tgcagaattc gtacaacgct ttgcggatct gataatttta       240
     ggacctgtgc agaaatatca cgcacataaa gagaaattat attatggatc atcaacaggg       300
     acgcctcttt ggaggctagg aaacttgacg aaagcgttgc acgatgtcta tgcacctaga       360
     caccaacaag agttctggga atcttctgaa cttgggtgcg atgtatgcgg ctattacaac       420
     aactcatcat gttcttgttt gattgttgat gggaagttgt gccaagtaca tggccttaag       480
     cacggggaga ctcagtcttc aaaatgcaaa gagtgtaaaa cacacagagg cgactcggca       540
     aacgagcaag agtggttcaa gaacatcatg aacaacaaaa cagaactgct cagtgaacaa       600
     gcctatatcc gcatgtacga ccctagcttt aggaaagggc tagagaggaa agcgctgaaa       660
     gcgatgatag caagtggaga tttctccggg ttcgacggaa cagtgtcaaa aacagatttg       720
     gtattaaatt atatattcta caagaacatc tatagaagtg aataccacct catgctcaaa       780
     acccggtggg aacattggat gtgggcgtta gtcataaacg accatgggca cgtcatcgtc       840
     agcgacggac agagatcctc aggagatcaa gacacaagtt ttggcaatac aatgatcaat       900
     ggtatttacc attttgccag tacagcactc tccttgggga tatcaattga agaagcggca       960
     actcccattg gggaagtatg gttccgaagt gactttgact acacaacacc gaagtacaag      1020
     aaattgtact tacatagaat cagtcacatc tcggacggag atgacaacct gcacttcggg      1080
     agcaaggaag acatagagaa atttgacaaa aacggaccta tgctcctgga acgtgcagga      1140
     aagaagatca gatgcggaac tcgatctgga tacgacctga cggaaagcta ctcagggatc      1200
     agttactgca gtcataatta caaccgatgc agaatcggaa aaatttcaac gccagtcgaa      1260
     atggcggaaa tgtcgggggt ggccgaaatg gtgcccatcg actgtgtccc taaaacattc      1320
     aagaaagtgg acaatgacaa tctcccgttg caacatctga gggacaaaaa actaggcctc      1380
     cgggtcgaat atatgccagc cagagctatg agcgaagtaa tcggcaagct ggtaatgaca      1440
     atgaaaggca gcactgccaa catggatttc acaagagact acggctcatc aacgaaagag      1500
     cagaagaggg gccaaaagaa cgaagaggcc attgccataa cacgaggcaa actgctcagc      1560
     tacctactga attattgtca gtattcagtg gtcagaattt tagtgatgag tgcgttttcc      1620
     attattggag acggtgtctg caacttgcag gaattaaagc gtcggtacaa cgtgcctagc      1680
     attgccaaga caattggctc tgctttgcgc ggggtattca acatctcgac gct             1733
//