ID   AB796388; SV 1; linear; genomic RNA; STD; VRL; 1733 BP.
XX
AC   AB796388;
XX
DT   15-MAR-2013 (Rel. 116, Created)
DT   30-SEP-2013 (Rel. 118, Last updated, Version 2)
XX
DE   Gentian Kobu-sho-associated virus gene for hypothetical polyprotein,
DE   putative RNA-dependent RNA polymerase domain, partial cds, isolate: Oh2.
XX
KW   .
XX
OS   Gentian Kobu-sho-associated virus
OC   Viruses; Riboviria; dsRNA viruses.
XX
RN   [1]
RP   1-1733
RA   Atsumi G., Sekine K.T.;
RT   ;
RL   Submitted (07-MAR-2013) to the INSDC.
RL   Contact:Go Atsumi Iwate biotechnology research center; 22-174-4 Narita,
RL   Kitakami, Iwate 024-0003, Japan URL    :http://www.ibrc.or.jp
XX
RN   [2]
RX   DOI; 10.1099/vir.0.053637-0.
RX   PUBMED; 23907397.
RA   Atsumi G., Tomita R., Kobayashi K., Sekine K.;
RT   "Prevalence and genetic diversity of an unusual virus associated with
RT   Kobu-sho disease of gentian in Japan";
RL   J. Gen. Virol. 94(Pt 10):2360-2365(2013).
XX
DR   MD5; 037461ad51daa095d12c87c8b04af728.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1733
FT                   /organism="Gentian Kobu-sho-associated virus"
FT                   /host="Gentiana triflora"
FT                   /cultivar="Iwate"
FT                   /isolate="Oh2"
FT                   /mol_type="genomic RNA"
FT                   /country="Japan:Iwate, Hanamaki, Ohasama"
FT                   /isolation_source="Kobu-sho-affected stem"
FT                   /collection_date="2009"
FT                   /db_xref="taxon:1150353"
FT   CDS             <1..>1733
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="hypothetical polyprotein"
FT                   /note="putative RNA-dependent RNA polymerase domain"
FT                   /db_xref="GOA:M5AEF3"
FT                   /db_xref="InterPro:IPR002166"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:M5AEF3"
FT                   /protein_id="BAM99929.1"
FT                   /translation="VCRDKVETKAKKNIDNGRLLIPDCTDEIDPRGKSYKYLPYTKKEE
FT                   ARRTRQDKLRQASNIAPRNIRFAEFVQRFADLMILGPVQKYHAHKEKLYYGSSTGTPLW
FT                   RLGNLTKALHDVYAPRHQQEFWESSELGCDVCGYYNNSSCSCLIVDGKLCQVHGLKHGE
FT                   TQSSKCKECKTHRGDSANEQEWFKNIMNNKTELLSEQAYIRMYDPSFRKGLERKALKAM
FT                   IASGDFSGFDGTVSKTDLVLNYIFYKNIYKSEYHLMLKTRWEHWMWALVINDHGHVIVS
FT                   DGQRSSGDQDTSFGNTMINGIYHFASTALSLGISIEEAATPIGEVWFRSDFDYTTPKYK
FT                   KLYLHRISHISDGDDNLHFGSKEDIEKFDKNGPMLLERAGKKIRCGTRSGYDLTESYSG
FT                   ISYCSHNYNRCRIGKIATPVEMTEMSGVTEMVPIDCVPKTFKKVDNDNLPLQHLRDKRL
FT                   GLRVEYMPARAMSEIIGKLVMTMKGSTANMDFTRDYGSSTKERKRGQKNEEAIAITRGK
FT                   LLSYLLNYCQYSVVRILVMSAFSIIGDGVCNLQELKRRYNVPSITKTIGSALRGVFNIS
FT                   TL"
XX
SQ   Sequence 1733 BP; 569 A; 356 C; 432 G; 376 T; 0 other;
     gtatgtaggg ataaggtgga gaccaaagcc aaaaagaaca tcgataatgg tcgtctgcta        60
     ataccggatt gtacagatga gattgacccg cgggggaaat cgtacaaata cttgccttac       120
     actaagaaag aagaagccag gagaactagg caagacaagt taagacaggc gagcaacatc       180
     gcgccgagga acatccgttt tgcagaattc gtacaacgct ttgcggattt gatgatcttg       240
     ggacctgtgc agaaatatca tgcacataaa gagaaattgt attatggatc atcaacaggg       300
     acgcctctct ggaggctagg aaatttgacg aaggcgttac acgatgtcta tgcacctaga       360
     caccaacaag agttctggga atcttctgaa cttgggtgcg atgtatgcgg ctattacaac       420
     aactcatcat gttcttgttt gattgttgat gggaagttgt gccaagtaca tggccttaag       480
     cacggggaga ctcagtcttc aaaatgcaaa gagtgcaaaa cacacagagg tgactcggca       540
     aacgagcaag agtggttcaa gaacatcatg aacaacaaaa cagaactgct cagtgaacaa       600
     gcctacattc gcatgtacga ccctagtttt aggaaggggc tagaaagaaa agcgttaaag       660
     gcgatgatag cgagtggaga tttctccgga ttcgacggaa cagtgtcgaa aacagatttg       720
     gtattgaatt acatattcta caaaaacatc tacaaaagcg aataccatct catgcttaaa       780
     acccggtggg aacattggat gtgggcgtta gttataaatg accatggaca cgtcatcgtc       840
     agcgatggac agagatcctc aggagatcaa gacacaagct tcggcaatac aatgatcaat       900
     ggtatatacc attttgccag tacagcactc tccttgggga tatcaattga agaagcagca       960
     acccctattg gggaagtgtg gttccggagt gactttgatt acacaacacc aaagtacaag      1020
     aaattgtatt tgcatagaat cagtcacatc tcggacggag atgataacct gcacttcggg      1080
     agcaaggaag acatagagaa atttgacaaa aacggaccta tgctcctgga acgtgcagga      1140
     aagaaaatta gatgcgggac tcgatccggt tacgacttaa cagaaagcta ttcagggatc      1200
     agttactgca gccacaacta caaccgatgc agaatcggaa aaattgcaac accagtagaa      1260
     atgacagaga tgtcgggggt gacggaaatg gtgcccatcg actgtgtccc caaaacattc      1320
     aaaaaggtgg acaacgacaa tctcccgtta caacatctaa gggacaaaag actcggcctt      1380
     agggttgagt acatgccagc cagagccatg agcgagataa taggcaagct ggtaatgaca      1440
     atgaagggca gcaccgccaa catggatttc acaagagatt acggctcatc gaccaaagag      1500
     cggaagagag gccaaaagaa cgaagaggcc attgccataa cacggggcaa actgctcagc      1560
     tatctactga attactgtca gtactcggta gttagaattt tagtgatgag tgcgttttcc      1620
     attattggag acggtgtctg caacctgcag gaactaaagc gtcggtacaa cgtgcctagc      1680
     attaccaaga caattggttc tgctttgcgc ggggtattca acatctcgac gct             1733
//