ID   AB796386; SV 1; linear; genomic RNA; STD; VRL; 1733 BP.
XX
AC   AB796386;
XX
DT   15-MAR-2013 (Rel. 116, Created)
DT   30-SEP-2013 (Rel. 118, Last updated, Version 2)
XX
DE   Gentian Kobu-sho-associated virus gene for hypothetical polyprotein,
DE   putative RNA-dependent RNA polymerase domain, partial cds, isolate: NW46.
XX
KW   .
XX
OS   Gentian Kobu-sho-associated virus
OC   Viruses; Riboviria; dsRNA viruses.
XX
RN   [1]
RP   1-1733
RA   Atsumi G., Sekine K.T.;
RT   ;
RL   Submitted (07-MAR-2013) to the INSDC.
RL   Contact:Go Atsumi Iwate biotechnology research center; 22-174-4 Narita,
RL   Kitakami, Iwate 024-0003, Japan URL    :http://www.ibrc.or.jp
XX
RN   [2]
RX   DOI; 10.1099/vir.0.053637-0.
RX   PUBMED; 23907397.
RA   Atsumi G., Tomita R., Kobayashi K., Sekine K.;
RT   "Prevalence and genetic diversity of an unusual virus associated with
RT   Kobu-sho disease of gentian in Japan";
RL   J. Gen. Virol. 94(Pt 10):2360-2365(2013).
XX
DR   MD5; 4443662750e7fdfde5d89852492b57b3.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1733
FT                   /organism="Gentian Kobu-sho-associated virus"
FT                   /host="Gentiana sp."
FT                   /isolate="NW46"
FT                   /mol_type="genomic RNA"
FT                   /country="Japan:Iwate, Waga, Shinmachi"
FT                   /isolation_source="Kobu-sho-affected stem"
FT                   /collection_date="2010"
FT                   /db_xref="taxon:1150353"
FT   CDS             <1..>1733
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="hypothetical polyprotein"
FT                   /note="putative RNA-dependent RNA polymerase domain"
FT                   /db_xref="GOA:M4ZTA8"
FT                   /db_xref="InterPro:IPR002166"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:M4ZTA8"
FT                   /protein_id="BAM99927.1"
FT                   /translation="VCRDKVETKAKKNIDNGRLLIPDCTDEIDPRGKSYKYLPYTKKEE
FT                   ARRARQDKLRQASNIAPRNIRFAEFVQRFADLMILGPVQKHHAHKEKLYYGSSTGTPLW
FT                   RLGNLTKALHDVYAPRHQQEFWESSELGCDVCGYYNNPSCSCLIVDGKLCQVHGLKHGE
FT                   TQSSKCKECKTHRGDSANEQEWFKNIMNNKTELLSEQAYIRMYDPSFRKGLERKALKAM
FT                   IASGDFSGFDGTVSKTDLVLNYIFYKNIYRSEYHLMLKTRWEHWMWALVINDHGHVIVS
FT                   DGQRSSGDQDTSFGNTMINGIYHFASTALSLGISIEEAATPIGEVWFRSDFDYTTPKYK
FT                   KLYLHRISHISDGDDNLHFGSKEDIEKFDKNGPMLLERAGKKIRCGTRSGYDLTESYSG
FT                   ISYCSHNYNRCRIGKISTPVEMTEMSGVTEMVPIDCVPKTFKKVDNDNLPLQHLRDKRL
FT                   GLRVEYMPARAMSEIIGKLVMTMKGSTANMDFTRDYGSSTKEQKRGQKNEEAIAITRGK
FT                   LLSYLLNYCQYSVVRILVMSAFSIIGDGVCNLQELKRRYNVPSIAKTIGSALRGVFNIS
FT                   TL"
XX
SQ   Sequence 1733 BP; 565 A; 356 C; 433 G; 379 T; 0 other;
     gtatgtagag acaaggtaga gaccaaagcc aaaaagaaca tcgataatgg tcgcctgcta        60
     ataccggatt gtacagatga gattgaccca agagggaaat cgtacaaata cttgccctat       120
     acaaagaaag aagaggctag gagagccagg caagacaagt tgagacaggc gagcaacatc       180
     gcgccgagga atatccgttt tgcagaattc gtgcaacgct ttgcggattt gatgatctta       240
     ggacctgtgc agaaacacca cgcacataag gagaaattgt attatggatc atcaacaggg       300
     acgccccttt ggaggttagg aaatttaacg aaagcgttac atgatgtcta tgcacctaga       360
     caccaacaag agttctggga atcttccgag cttgggtgtg atgtatgcgg ctactacaac       420
     aacccatcat gttcttgttt gattgttgat gggaagttgt gtcaagtaca tggcctcaag       480
     cacggggaaa ctcagtcctc gaaatgcaaa gagtgtaaga cacatagagg tgactcggca       540
     aacgagcaag agtggttcaa aaacatcatg aacaacaaaa cagaactgct cagtgaacag       600
     gcttacattc gcatgtatga ccctagcttt aggaaggggc tagagagaaa agcgctaaag       660
     gcgatgatag caagtggaga cttctccggg ttcgacggaa cagtgtcgaa aacagatttg       720
     gtattgaatt acatattcta caagaacatc tatagaagcg aataccatct catgcttaaa       780
     acccggtggg aacattggat gtgggcgtta gtcatcaacg accatggaca cgtcatcgtt       840
     agcgatggac agagatcctc aggagatcaa gacacaagct ttggcaatac aatgatcaat       900
     ggtatttacc attttgccag cacagcactc tccttgggga tatcaattga agaagctgcg       960
     acccctattg gggaagtatg gttccggagt gactttgatt atacaacgcc gaagtataag      1020
     aaattgtact tacatagaat cagtcacatc tcggacggag atgataacct acacttcggg      1080
     agcaaggagg acatagaaaa atttgataaa aacggaccta tgctcctgga acgtgcggga      1140
     aagaagatta gatgcggaac tcgatccggt tatgacttga cggaaagcta ctcagggatc      1200
     agttactgca gtcataacta caaccgatgt agaatcggaa aaatttcaac accagtagaa      1260
     atgacagaaa tgtcgggggt gacagaaatg gtgcccatcg actgcgtccc taaaacattc      1320
     aagaaagtgg acaacgacaa tctcccacta caacatctga gggacaaaag attaggcctt      1380
     cgggtcgaat acatgccagc cagagccatg agcgagataa tcggcaagct ggtaatgacg      1440
     atgaaaggca gcaccgccaa catggatttc acgagagact acggctcatc tacaaaggag      1500
     cagaagagag gccaaaagaa cgaagaggcc attgccataa cacgaggcaa actgctcagc      1560
     tacctactga attattgtca atattcagtg gtcagaattt tagtgatgag tgcgttttcc      1620
     attattggag acggtgtctg caacttgcag gaattaaagc gtcggtacaa cgtgcctagc      1680
     attgccaaga caattggctc tgctttgcgc ggggtattca acatctcgac gct             1733
//