ID   AB796383; SV 1; linear; genomic RNA; STD; VRL; 1733 BP.
XX
AC   AB796383;
XX
DT   15-MAR-2013 (Rel. 116, Created)
DT   30-SEP-2013 (Rel. 118, Last updated, Version 2)
XX
DE   Gentian Kobu-sho-associated virus gene for hypothetical polyprotein,
DE   putative RNA-dependent RNA polymerase domain, partial cds, isolate: NW37.
XX
KW   .
XX
OS   Gentian Kobu-sho-associated virus
OC   Viruses; Riboviria; dsRNA viruses.
XX
RN   [1]
RP   1-1733
RA   Atsumi G., Sekine K.T.;
RT   ;
RL   Submitted (07-MAR-2013) to the INSDC.
RL   Contact:Go Atsumi Iwate biotechnology research center; 22-174-4 Narita,
RL   Kitakami, Iwate 024-0003, Japan URL    :http://www.ibrc.or.jp
XX
RN   [2]
RX   DOI; 10.1099/vir.0.053637-0.
RX   PUBMED; 23907397.
RA   Atsumi G., Tomita R., Kobayashi K., Sekine K.;
RT   "Prevalence and genetic diversity of an unusual virus associated with
RT   Kobu-sho disease of gentian in Japan";
RL   J. Gen. Virol. 94(Pt 10):2360-2365(2013).
XX
DR   MD5; aae5d15789c072b647181e7679916dc2.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1733
FT                   /organism="Gentian Kobu-sho-associated virus"
FT                   /host="Gentiana scabra x Gentiana triflora"
FT                   /cultivar="Albireo"
FT                   /isolate="NW37"
FT                   /mol_type="genomic RNA"
FT                   /country="Japan:Iwate, Waga, Ryosawa"
FT                   /isolation_source="Kobu-sho-affected stem"
FT                   /collection_date="2010"
FT                   /db_xref="taxon:1150353"
FT   CDS             <1..>1733
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="hypothetical polyprotein"
FT                   /note="putative RNA-dependent RNA polymerase domain"
FT                   /db_xref="GOA:M5AEE8"
FT                   /db_xref="InterPro:IPR002166"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:M5AEE8"
FT                   /protein_id="BAM99924.1"
FT                   /translation="VCRDKVETKAKKNIDNGRLLIPDCTDEIDPRGKSYKYLPYTKKEE
FT                   ARRARQDKLRQASNIAPRNIRFAEFVQRFADLMILGPVQKHHAHKEKLYYGSSTGTPLW
FT                   RLGNLTKALHDVYAPRHQQEFWESSELGCDVCGYYNNPSCSCLIVNGKLCQVHGLKHGE
FT                   IQSSKCKECRTHRGDSANEQEWFKNIVNNKTELLSEQAYIRMYDPSFRRGLERKALKAM
FT                   IASGDFSGFDGTVSKTDLVLNYIFYKNIYKSEYHLMLKTRWEHWMWALVINDHGHVIVS
FT                   DGQRSSGDQDTSFGNTMINGIYHFASTALSLGISIEEAATPVGEVWFRSDFDYTTPKYK
FT                   KLYLHRISHISDGDDNLHFGSKEDIEKFDKNGPMLLERAGKKIRCGTRSGYDLTESYSG
FT                   ISYCSHSYNRCRIGKIATPVEMTEMSGVTEMVPIDCVPKTFKKVDNDNLPLQHLRDKRL
FT                   GLRVEYMPARAMSEIIGKLVMTMKGSTANMDFTRDYGSSTKEQKRGQKNEEAIAITRGK
FT                   LLSYLLNYCQYSVVRILVMSAFSIIGDGVCNLQELKRRYNVPSITKTIGSALRGVFNIS
FT                   TL"
XX
SQ   Sequence 1733 BP; 571 A; 361 C; 432 G; 369 T; 0 other;
     gtatgtagag ataaagtgga gactaaggcc aaaaagaaca tcgataatgg tcgtctacta        60
     ataccagatt gtacggacga gattgacccg agagggaaat cgtacaaata cttgccttac       120
     acaaagaaag aagaggccag gagagccagg caagacaagt taagacaggc gagcaacatc       180
     gcgccaagga acatccgctt tgctgaattc gttcagcgct ttgcggactt gatgatttta       240
     ggacccgtgc aaaaacacca tgcacataaa gaaaaactgt attatggatc atcaacagga       300
     acgcctctct ggaggttagg aaatttgaca aaggcgttgc acgatgtgta tgcaccgaga       360
     caccaacagg agttctggga atcctcggaa cttgggtgcg atgtatgcgg ttactataac       420
     aacccatcat gttcttgttt gattgttaat gggaagttgt gccaagtaca tggcctcaag       480
     cacggggaaa tccagtcctc aaaatgcaaa gaatgtagaa cgcatagagg tgactcggca       540
     aacgagcaag agtggttcaa gaacatcgtg aacaacaaaa cagaactact cagtgaacaa       600
     gcctacattc gtatgtatga ccctagtttc agaagggggc tagagaggaa agcgctgaaa       660
     gcgatgatag cgagtggaga tttctccgga ttcgacggaa cagtgtcgaa aacagattta       720
     gtattgaatt acatattcta caaaaacatc tacaaaagcg aataccatct catgcttaaa       780
     acccggtggg aacattggat gtgggcgtta gttataaacg accatggaca cgtcatcgtc       840
     agcgatggac agagatcctc aggagatcaa gacacaagct tcggcaatac aatgatcaat       900
     ggtatatacc attttgccag tacagcactc tccttgggga tatcaattga agaagcagca       960
     acccctgttg gggaagtgtg gttccggagt gactttgatt acacaacacc aaagtacaag      1020
     aaattgtact tgcatagaat cagtcacatc tcggacggag atgataacct gcacttcggg      1080
     agcaaggaag acatagagaa atttgacaaa aacggaccta tgctcctgga acgtgcagga      1140
     aagaaaatta gatgcgggac tcgatccggt tacgacttaa cagaaagcta ttcagggatc      1200
     agttactgca gtcacagcta caaccgatgc agaatcggaa aaattgcaac accagttgaa      1260
     atgacagaga tgtcgggggt gacggaaatg gtgcccatcg actgtgtccc caaaacattc      1320
     aaaaaggtgg acaacgacaa tctcccgtta caacatctaa gggacaaaag actcggcctt      1380
     agggttgagt acatgccagc cagagccatg agcgagataa taggcaagct ggtaatgaca      1440
     atgaagggca gcaccgccaa catggatttc acaagagatt acggctcatc gaccaaagag      1500
     cagaagagag gccaaaagaa cgaagaggcc attgccataa cacggggcaa actgctcagc      1560
     tatctactga attactgtca gtactcggta gttagaattt tagtgatgag tgcgttttcc      1620
     attattggag acggtgtctg caacctgcag gaactaaagc gtcggtacaa cgtgcctagc      1680
     attaccaaga caattggttc tgctttgcgc ggggtattca acatctcgac gct             1733
//