ID   AB796377; SV 1; linear; genomic RNA; STD; VRL; 1733 BP.
XX
AC   AB796377;
XX
DT   15-MAR-2013 (Rel. 116, Created)
DT   30-SEP-2013 (Rel. 118, Last updated, Version 2)
XX
DE   Gentian Kobu-sho-associated virus gene for hypothetical polyprotein,
DE   putative RNA-dependent RNA polymerase domain, partial cds, isolate: Id1.
XX
KW   .
XX
OS   Gentian Kobu-sho-associated virus
OC   Viruses; Riboviria; dsRNA viruses.
XX
RN   [1]
RP   1-1733
RA   Atsumi G., Sekine K.T.;
RT   ;
RL   Submitted (07-MAR-2013) to the INSDC.
RL   Contact:Go Atsumi Iwate biotechnology research center; 22-174-4 Narita,
RL   Kitakami, Iwate 024-0003, Japan URL    :http://www.ibrc.or.jp
XX
RN   [2]
RX   DOI; 10.1099/vir.0.053637-0.
RX   PUBMED; 23907397.
RA   Atsumi G., Tomita R., Kobayashi K., Sekine K.;
RT   "Prevalence and genetic diversity of an unusual virus associated with
RT   Kobu-sho disease of gentian in Japan";
RL   J. Gen. Virol. 94(Pt 10):2360-2365(2013).
XX
DR   MD5; 2d87a4628108874a1972dfa0963486fa.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1733
FT                   /organism="Gentian Kobu-sho-associated virus"
FT                   /host="Gentiana sp."
FT                   /isolate="Id1"
FT                   /mol_type="genomic RNA"
FT                   /country="Japan:Iwate, Hanamaki, Ishidoriya"
FT                   /isolation_source="Kobu-sho-affected stem"
FT                   /collection_date="2010"
FT                   /db_xref="taxon:1150353"
FT   CDS             <1..>1733
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="hypothetical polyprotein"
FT                   /note="putative RNA-dependent RNA polymerase domain"
FT                   /db_xref="GOA:M4ZU98"
FT                   /db_xref="InterPro:IPR002166"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:M4ZU98"
FT                   /protein_id="BAM99918.1"
FT                   /translation="VCRDKVETKAKKNIDNGRLLIPDCTDEIDPRGKSYKYLPYTKKEE
FT                   ARRARQEKLRQASNIAPRNIRFAEFVQRFADLMILGPVQKHHAHKEKLYYGSSTGTPLW
FT                   RLGNLTKALHDVYAPRHQQEFWESSELGCDVCGYYNNSSCSCLIVDGKLCQVHGLKHGE
FT                   TQSSKCKECKTHRGDSANEQEWFKNIMNNKTELLSEQAYIRMYDPSFRKGLERKALKAM
FT                   IASGDFSGFDGTVSKTDLVLNYIFYKNIYRSEYHLMLKTRWEHWMWALVINDHGHVIVS
FT                   DGQRSSGDQDTSFGNTMINGIYHFASTALSLGISIEEAATPIGEVWFRSDFDYTTPKYK
FT                   KLYLHRISHISDGDDNLHFGSKEDIEKFDKNGPMLLERAGKKIRCGTRSGYDLTESYSG
FT                   ISYCSHNYNRCRIGKISTPIEMAEMSGMAEMVPIDCVPKTFKKVDNDNLPLQHLRDKRL
FT                   GLRVEYMPARAMSEIIGKLVMTMKGSTANMDFTRDYGSSTKEQKRGQKNEEAIAITRGK
FT                   LLSYLLNYCQYSVVRILVMSAFSIIGDGVCNLQELKRRYNVPSITKTIGSALRGVFNIS
FT                   TL"
XX
SQ   Sequence 1733 BP; 576 A; 354 C; 429 G; 374 T; 0 other;
     gtatgtagag acaaagtaga gaccaaggcc aaaaagaaca tcgacaatgg ccgtctgcta        60
     ataccagatt gtacagatga gattgaccca agggggaagt cgtacaaata tttgccttat       120
     acaaagaagg aagaggccag aagagccagg caagaaaagc tgagacaggc gagcaatatt       180
     gcgccgagga acatccgctt tgcagaattc gtgcagcgct ttgcggattt gatgattcta       240
     ggacctgtgc aaaaacacca tgcacacaaa gagaaattgt attatgggtc atcaacaggg       300
     acgcctctct ggaggctagg aaatttgaca aaggcgttac acgatgtcta tgcacctaga       360
     caccaacaag agttctggga atcttctgaa cttgggtgcg atgtatgtgg ctattacaac       420
     aactcatcat gttcttgttt gattgttgat gggaagttgt gccaagtaca tggccttaag       480
     cacggggaga ctcagtcttc aaaatgcaaa gagtgtaaaa cacacagagg cgactcagca       540
     aacgagcaag agtggttcaa gaacatcatg aacaacaaaa cagaactgct cagtgaacaa       600
     gcctatatcc gcatgtacga ccctagcttt aggaaagggc tagagaggaa agcgctgaaa       660
     gcgatgatag caagtggaga tttctccggg ttcgacggaa cagtgtcgaa aacagatttg       720
     gtattaaatt acatattcta caagaacatc tatagaagtg aataccatct catgcttaaa       780
     acccggtggg aacattggat gtgggcgtta gtcataaacg accatgggca cgttatcgtc       840
     agcgacggac agagatcctc aggagatcaa gacacaagct ttggcaatac aatgattaat       900
     ggtatttacc attttgccag tacagcactc tccctgggga tatcaattga agaggcagca       960
     accccaattg gggaagtatg gttccggagt gactttgatt atacaacacc aaagtacaag      1020
     aaattgtact tacataggat cagtcacatc tcggacggag atgacaacct gcacttcggg      1080
     agcaaggaag acatagagaa atttgacaaa aacggaccta tgctcctgga acgtgcagga      1140
     aagaaaatta gatgcgggac tcgatccggt tacgacctga cagaaagcta ttcagggatc      1200
     agttactgca gtcacaacta caaccgatgc agaatcggaa aaatatcaac accaattgaa      1260
     atggcagaaa tgtcaggaat ggcagaaatg gtgccaatcg actgtgtccc taaaacattc      1320
     aagaaagtgg acaatgacaa tctcccgttg caacatctga gggacaaaag acttggcctt      1380
     agggttgagt acatgccagc cagagccatg agcgagataa taggcaagtt ggtaatgaca      1440
     atgaaaggca gcaccgccaa catggacttc acgagagact acggctcatc aacgaaagag      1500
     cagaagagag gccaaaagaa cgaagaggcc attgccataa cacgaggcaa actgctcagc      1560
     tatctactga actactgtca gtattcagta gttagaatct tagtgatgag tgcgttttct      1620
     attattggag acggtgtctg caatttgcag gaattaaagc gtcggtacaa cgtgcctagc      1680
     attaccaaga caattggttc tgctctgcgc ggggtattca acatctcgac gct             1733
//