ID   AB796376; SV 1; linear; genomic RNA; STD; VRL; 1733 BP.
XX
AC   AB796376;
XX
DT   15-MAR-2013 (Rel. 116, Created)
DT   30-SEP-2013 (Rel. 118, Last updated, Version 2)
XX
DE   Gentian Kobu-sho-associated virus gene for hypothetical polyprotein,
DE   putative RNA-dependent RNA polymerase domain, partial cds, isolate: Fs1.
XX
KW   .
XX
OS   Gentian Kobu-sho-associated virus
OC   Viruses; Riboviria; dsRNA viruses.
XX
RN   [1]
RP   1-1733
RA   Atsumi G., Sekine K.T.;
RT   ;
RL   Submitted (07-MAR-2013) to the INSDC.
RL   Contact:Go Atsumi Iwate biotechnology research center; 22-174-4 Narita,
RL   Kitakami, Iwate 024-0003, Japan URL    :http://www.ibrc.or.jp
XX
RN   [2]
RX   DOI; 10.1099/vir.0.053637-0.
RX   PUBMED; 23907397.
RA   Atsumi G., Tomita R., Kobayashi K., Sekine K.;
RT   "Prevalence and genetic diversity of an unusual virus associated with
RT   Kobu-sho disease of gentian in Japan";
RL   J. Gen. Virol. 94(Pt 10):2360-2365(2013).
XX
DR   MD5; 7a59f5eb0e9cfa8253643839285a9e84.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1733
FT                   /organism="Gentian Kobu-sho-associated virus"
FT                   /host="Gentiana sp."
FT                   /isolate="Fs1"
FT                   /mol_type="genomic RNA"
FT                   /country="Japan:Fukushima, Ishikawa, Hirata"
FT                   /isolation_source="Kobu-sho-affected stem"
FT                   /collection_date="2010"
FT                   /db_xref="taxon:1150353"
FT   CDS             <1..>1733
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="hypothetical polyprotein"
FT                   /note="putative RNA-dependent RNA polymerase domain"
FT                   /db_xref="GOA:M4ZT98"
FT                   /db_xref="InterPro:IPR002166"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:M4ZT98"
FT                   /protein_id="BAM99917.1"
FT                   /translation="VCRDKVETKAKKNIDNGRLLIPDCTDEIDPRGKSYKYLPYTKKEE
FT                   ARRARQDKLRQASNIAPRNIRFAEFVQRFADLMILGPVQKHHAHKEKLYYGSSTGTPLW
FT                   RLGNLTKALHDVYAPRHQQEFWESSELGCNVCGYYNNSSCSCLIVDGKLCQVHGLKHGE
FT                   TQSSKCKECKTHRGDSANEQEWFKNIMNNKTELLSEQAYIRMYDPSFRRGLERKALKAM
FT                   IASGDFSGFDGTVSKTDLVLNYIFYKNIYKSEYHLMLKTRWEHWMWALVINDHGHVIVS
FT                   DGQRSSGDQDTSFGNTMINGIYHFASTALSLGISIEEAATPIGEVWFRSDFDYTTPKYK
FT                   KLYLHRISHISDGDDNLHFGSKEDIEKFDKNGPMLLERAGKKIRCGTRSGYDLTESYSG
FT                   ISYCSHNYNRCRIGKIATPVEMTEMSGVTEMVPIDCVPKTFKKVDNDNLPLQHLRDKRL
FT                   GLRVEYMPARAMSEIIGKLVMTMKGSTANMDFTRDYGSSTKEQKRGQKNEEAIAITRGK
FT                   LLSYLLNYCQYSVVRILVMSAFSIIGDGVCNLQELKRRYNVPSITKTIGSALRGVFNIS
FT                   TL"
XX
SQ   Sequence 1733 BP; 565 A; 366 C; 435 G; 367 T; 0 other;
     gtatgtagag ataaagtgga gactaaggcc aaaaagaaca tcgataatgg tcgtctacta        60
     ataccagatt gtacggacga gattgaccca agagggaaat cgtataaata cttgccttac       120
     acaaagaaag aagaggccag gagggccagg caagacaagc tgaggcaggc gagcaacatc       180
     gcgcctagga acattcgctt tgcagaattt gtgcagcgct ttgcggacct gatgatttta       240
     ggacctgtgc agaaacatca cgcacataaa gaaaagctat attatggatc atctacagga       300
     acgccccttt ggaggctagg gaatttgaca aaggcactgc atgatgtcta tgcacctaga       360
     caccaacaag agttctggga atcttccgag cttgggtgca atgtatgcgg ctactacaac       420
     aactcatcat gttcttgttt gattgttgat gggaagttgt gccaagtaca tggcctcaaa       480
     cacggggaaa cccagtcctc gaagtgcaaa gaatgtaaaa cacatagagg tgattcagca       540
     aacgagcaag agtggttcaa gaacatcatg aacaacaaaa cggaactact cagtgaacaa       600
     gcctacatcc gcatgtatga ccctagtttc agaagggggc tagagaggaa agcgctgaaa       660
     gcgatgatag cgagtggaga tttctccgga ttcgacggaa cagtgtcgaa aacagatttg       720
     gtattgaatt acatattcta caaaaacatc tacaaaagcg aataccatct catgcttaaa       780
     acccggtggg aacactggat gtgggcgcta gtcatcaacg accatgggca cgtcattgtc       840
     agcgatggac aaagatcctc aggagatcag gatacaagct ttggcaatac aatgatcaat       900
     ggtatttacc attttgccag cacagcactc tccttgggga tatcgataga agaagcagca       960
     actcctattg gggaggtatg gttccggagt gactttgatt acacaacacc aaagtacaag      1020
     aaattgtact tgcacagaat cagtcacatc tcggacggag atgataacct gcacttcggg      1080
     agcaaggaag acatagagaa atttgacaaa aacggaccta tgctcctgga acgtgcagga      1140
     aagaaaatta gatgcgggac tcgatccggt tacgacctga cagaaagcta ctcagggatc      1200
     agttactgca gtcacaacta caaccgatgc agaatcggaa aaattgcaac accagtagaa      1260
     atgacagaga tgtcgggggt gacggaaatg gtgcccatcg actgtgtccc caaaacattc      1320
     aaaaaggtgg acaacgacaa tctcccgtta caacatctaa gggacaaaag actcggcctt      1380
     agggttgagt acatgccagc tagagccatg agcgagataa taggcaagct ggtaatgacg      1440
     atgaagggca gcaccgccaa catggatttc acgagagatt acggctcatc gaccaaagag      1500
     cagaagagag gccaaaagaa cgaagaggcc attgccataa cacggggcaa actgctcagt      1560
     tatctactga attactgtca gtactcggta gttagaattt tagtgatgag tgcgttttcc      1620
     attattggag acggtgtctg caacctgcag gaactaaagc gtcggtacaa cgtgcctagc      1680
     attaccaaga caattggttc tgctttgcgc ggggtattca acatctcgac gct             1733
//