ID   AB796374; SV 1; linear; genomic RNA; STD; VRL; 1733 BP.
XX
AC   AB796374;
XX
DT   15-MAR-2013 (Rel. 116, Created)
DT   30-SEP-2013 (Rel. 118, Last updated, Version 2)
XX
DE   Gentian Kobu-sho-associated virus gene for hypothetical polyprotein,
DE   putative RNA-dependent RNA polymerase domain, partial cds, isolate: At166.
XX
KW   .
XX
OS   Gentian Kobu-sho-associated virus
OC   Viruses; Riboviria; dsRNA viruses.
XX
RN   [1]
RP   1-1733
RA   Atsumi G., Sekine K.T.;
RT   ;
RL   Submitted (07-MAR-2013) to the INSDC.
RL   Contact:Go Atsumi Iwate biotechnology research center; 22-174-4 Narita,
RL   Kitakami, Iwate 024-0003, Japan URL    :http://www.ibrc.or.jp
XX
RN   [2]
RX   DOI; 10.1099/vir.0.053637-0.
RX   PUBMED; 23907397.
RA   Atsumi G., Tomita R., Kobayashi K., Sekine K.;
RT   "Prevalence and genetic diversity of an unusual virus associated with
RT   Kobu-sho disease of gentian in Japan";
RL   J. Gen. Virol. 94(Pt 10):2360-2365(2013).
XX
DR   MD5; 7cfb606a3185924dae6ef79ed742b54e.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1733
FT                   /organism="Gentian Kobu-sho-associated virus"
FT                   /host="Gentiana triflora"
FT                   /isolate="At166"
FT                   /mol_type="genomic RNA"
FT                   /country="Japan:Akita, Daisen"
FT                   /isolation_source="Kobu-sho-affected stem"
FT                   /collection_date="2009"
FT                   /db_xref="taxon:1150353"
FT   CDS             <1..>1733
FT                   /codon_start=1
FT                   /transl_table=1
FT                   /product="hypothetical polyprotein"
FT                   /note="putative RNA-dependent RNA polymerase domain"
FT                   /db_xref="GOA:M4ZUJ3"
FT                   /db_xref="InterPro:IPR002166"
FT                   /db_xref="InterPro:IPR007094"
FT                   /db_xref="UniProtKB/TrEMBL:M4ZUJ3"
FT                   /protein_id="BAM99915.1"
FT                   /translation="VCRDKVETKAKKNIDNGRLLIPDCTDEIDPRGKSYKYLPYTKKEE
FT                   ARRARQDRLRQASNIAPRNIRFAEFVQRFADLMILGPVQKHHAHKEKLYYGSSTGTPLW
FT                   RLGNLTKALHDVYAPRHQQEFWESSELGCNVCGYYNNSSCSCLIVDGKLCQVHGLKHGE
FT                   TQSSKCKECKTHRGDSANEQEWFKNIMNNKTELLSEQAYIRMYDPSFRRGLERKALKAM
FT                   IASGDFSGFDGTVSKTDLVLNYIFYKNIYKSEYHLMLKTRWEHWMWALVINDHGHVIVS
FT                   DGQRSSGDQDTSFGNTMINGIYHFASTALSLGISIDEAATPIGEVWFRSDFDYTTPKYK
FT                   KLYLHRISHISDGDDNLHFGSKEDIEKFDKNGPMLLERAGKKIRCGTRSGYDLTENYSG
FT                   ISYCSHNYNRCRIGKISTPVEMTEMSGVAEMVPIDCVPKTFKKVDNDNLPLQHLRDKRL
FT                   GLRVEYMPARAMSEIIGKLVMTMKGSTANMDFTRDYGSSTKEQKRGQKNEEAIAITRGK
FT                   LLSYLLNYCQYSVVRILVMSAFSIIGDGVCNLQELKRRYNVPSITKTIGSALRGVFNIS
FT                   TL"
XX
SQ   Sequence 1733 BP; 566 A; 365 C; 430 G; 372 T; 0 other;
     gtatgtagag ataaagtgga gactaaggcc aaaaagaaca tcgataatgg tcgtctacta        60
     ataccagatt gtacggacga gattgacccg agagggaaat cgtacaagta cttgccttac       120
     acaaagaaag aagaggctag aagagcccgg caagacaggc taagacaggc gagcaacatc       180
     gcgccaagga acattcgctt tgctgaattc gttcaacgct ttgcggactt gatgattcta       240
     ggacccgtgc agaaacacca tgcacacaaa gaaaagttat actatggatc atcgacaggg       300
     acgcctctct ggaggttagg aaatttgaca aaggcgttgc atgatgtcta tgcacctaga       360
     caccaacaag agttctggga atcttccgag cttgggtgca atgtatgcgg ctactacaac       420
     aactcatcat gttcttgttt gattgttgat gggaagttgt gtcaagtaca tggcctcaaa       480
     cacggggaaa cccagtcctc gaaatgcaaa gaatgtaaaa cacatagagg tgattcggca       540
     aacgagcaag agtggttcaa gaacattatg aacaacaaaa cagaactact cagtgaacaa       600
     gcctacattc gtatgtatga ccccagtttc agaagggggc tagagaggaa agcgctgaaa       660
     gcgatgatag cgagtggaga tttctccgga ttcgacggaa cagtgtcgaa aacagatttg       720
     gtattgaatt acatattcta caaaaacatc tacaaaagcg aatatcatct catgcttaaa       780
     acccggtggg aacactggat gtgggcgcta gtcatcaacg accacgggca cgtcattgtc       840
     agcgatggac aaagatcctc aggagatcag gatacaagct ttggcaatac aatgatcaat       900
     ggtatttacc attttgccag tacagcactc tccttgggga tatcaattga cgaagcagca       960
     acccctattg gggaagtgtg gttccggagc gactttgatt acacaacacc aaaatacaaa      1020
     aaattgtact tgcatagaat cagtcacatc tcggatggag atgataacct gcacttcggg      1080
     agcaaggaag acatagagaa atttgataaa aacggaccta tgctcctgga acgtgcagga      1140
     aagaagatca gatgtggaac tcgatccggc tacgacctga cagagaatta ttcagggatc      1200
     agttactgca gtcacaacta caaccgatgc agaatcggaa aaatatcaac accggtcgag      1260
     atgacagaga tgtccggcgt ggcagaaatg gtacctatcg attgcgtgcc aaaaacattc      1320
     aaaaaggtgg acaacgacaa tctcccgtta caacatctaa gggacaaaag actcggcctt      1380
     agggttgagt acatgccagc cagagccatg agcgagataa taggcaagct ggtaatgacg      1440
     atgaagggca gcaccgccaa catggatttc acgagagatt acggctcatc gaccaaagag      1500
     cagaagagag gccaaaagaa cgaagaggcc attgccataa cacggggcaa actgctcagc      1560
     tatctactga attactgtca gtactcggta gttagaattt tagtgatgag tgcgttttcc      1620
     attattgggg acggtgtctg caacctgcag gaactaaagc gtcggtacaa cgtgcctagc      1680
     attaccaaga caattggttc tgctttgcgc ggggtattca acatctcgac gct             1733
//