ID   AB796368; SV 1; linear; genomic RNA; STD; VRL; 1667 BP.
XX
AC   AB796368;
XX
DT   15-MAR-2013 (Rel. 116, Created)
DT   30-SEP-2013 (Rel. 118, Last updated, Version 2)
XX
DE   Gentian Kobu-sho-associated virus gene for hypothetical polyprotein,
DE   putative helicase domain, partial cds, isolate: Ty6.
XX
KW   .
XX
OS   Gentian Kobu-sho-associated virus
OC   Viruses; Riboviria; dsRNA viruses.
XX
RN   [1]
RP   1-1667
RA   Atsumi G., Sekine K.T.;
RT   ;
RL   Submitted (07-MAR-2013) to the INSDC.
RL   Contact:Go Atsumi Iwate biotechnology research center; 22-174-4 Narita,
RL   Kitakami, Iwate 024-0003, Japan URL    :http://www.ibrc.or.jp
XX
RN   [2]
RX   DOI; 10.1099/vir.0.053637-0.
RX   PUBMED; 23907397.
RA   Atsumi G., Tomita R., Kobayashi K., Sekine K.;
RT   "Prevalence and genetic diversity of an unusual virus associated with
RT   Kobu-sho disease of gentian in Japan";
RL   J. Gen. Virol. 94(Pt 10):2360-2365(2013).
XX
DR   MD5; 1cf912d9fbb017545754c1be84ac07a9.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1667
FT                   /organism="Gentian Kobu-sho-associated virus"
FT                   /host="Gentiana triflora"
FT                   /cultivar="Madjieru"
FT                   /isolate="Ty6"
FT                   /mol_type="genomic RNA"
FT                   /country="Japan:Iwate, Morioka, Tamayama"
FT                   /isolation_source="Kobu-sho-affected stem"
FT                   /collection_date="2009"
FT                   /db_xref="taxon:1150353"
FT   CDS             <1..>1667
FT                   /codon_start=2
FT                   /transl_table=1
FT                   /product="hypothetical polyprotein"
FT                   /note="putative helicase domain"
FT                   /db_xref="InterPro:IPR001650"
FT                   /db_xref="InterPro:IPR014001"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:M5AEC9"
FT                   /protein_id="BAM99909.1"
FT                   /translation="KTGESKMVDHFAFIDVSRDGQVIPVPFVDRTKGYSGLPILDEFGH
FT                   PVGIFGFLRTMRAKTENGVIDRPESARPSVQVGQFDITTKAVDVLQAVRGAGANGKWLR
FT                   LGAPTASGKSTRLVKEIGRIMYQKARRPIHIAVLEPRVFVVNNLWQGQSMMTNADAKDC
FT                   TFFNIVRKHGRLYENDKTQSHKDPSQAKVTITYMTYGSMVASLGKELRWDLVILDEFHS
FT                   RSDSDVLAVDAALQVLGHYNGVMAMTATFWAPDPTMNRFVDYSIGTAKKFPIERKVIRK
FT                   FDSVTEGEEGLYFKIRGPDGTFYALPRESCNAGGKTIVFLDSKNNCAKGMKELLATGPG
FT                   VNVMTLTSENRDVEIPDGQVVIFATNVAESGVTIVNCDNVISFGVQIEPQAGFDVNLGE
FT                   DGTFDSYHSLVQTKITTCAETQQMGRTGRTCPGTFWTTMTTPLPEMTDFPRHAMSGAYL
FT                   TLMRNDEVMEMAEVRQRGGQWEDLLHTLRNLHPKFLPASLNFRAVKGEYPSIIELKDFR
FT                   ELHIREGAQEDIFWRKLEVVQCIQYIDPITFYLLPNFP"
XX
SQ   Sequence 1667 BP; 497 A; 335 C; 443 G; 392 T; 0 other;
     gaagacaggc gagtccaaga tggttgatca cttcgccttt attgatgtct cccgagatgg        60
     acaggttatt cctgtccctt tcgttgacag aactaaaggt tacagtgggc ttcctatcct       120
     ggatgagttt ggacacccag tgggaatctt cggatttctt aggacaatga gggccaagac       180
     ggaaaatggc gtgattgata gaccagagag cgctcgtccg agtgtgcaag tggggcagtt       240
     tgatataaca acaaaggctg ttgatgtgtt gcaagcagtc agaggagctg gcgcaaatgg       300
     aaagtggctc agactcgggg ccccaacagc ctctggtaag agtacaaggc ttgtgaagga       360
     aatcggaaga ataatgtatc aaaaggctcg caggcctatc catattgccg tgcttgaacc       420
     tagagtgttt gtcgtaaaca acttgtggca agggcaaagc atgatgacta acgctgacgc       480
     gaaggattgc acattcttta acatcgtccg taagcacgga cgattgtacg aaaatgacaa       540
     aacacaatca cataaagacc caagccaggc gaaagtcact ataacataca tgacctatgg       600
     atcaatggtg gccagtctag ggaaagaact caggtgggat ttagttatcc ttgacgagtt       660
     tcacagtcgg agtgacagtg acgtgttggc agtcgatgcc gcactgcaag tattgggaca       720
     ttataatgga gtcatggcga tgaccgcaac tttctgggca ccagatccaa cgatgaacag       780
     gtttgttgat tactccattg ggacggcgaa gaaattccct atcgagagaa aggtgatcag       840
     gaaattcgat tccgtcactg aaggtgaaga agggctgtat ttcaagatca gaggccctga       900
     tggtacattc tacgccctgc caagggaaag ttgcaatgca ggagggaaga ctatcgtttt       960
     cctagatagt aaaaacaact gtgcgaaagg aatgaaggaa ctcttggcga caggaccggg      1020
     agtgaatgtg atgacactta caagtgagaa cagagacgtc gaaattccag acgggcaagt      1080
     ggtgattttt gctacaaatg tcgctgagag cggagtcaca attgttaatt gtgataatgt      1140
     gattagcttc ggagtgcaaa ttgagccgca agcagggttt gatgtgaacc ttggagaaga      1200
     tgggaccttt gactcctatc attcacttgt acaaacaaaa ataacaactt gtgcagaaac      1260
     tcaacaaatg ggaagaactg gaagaacatg tccaggaaca ttttggacaa caatgactac      1320
     gcctctccca gagatgactg atttccctag acacgcaatg tctggggcgt acttaacttt      1380
     gatgagaaat gacgaagtca tggagatggc tgaggtcaga caacgcggtg gacagtggga      1440
     agatctatta cacacgttga ggaacttaca tccaaagttt ttaccagcca gcctcaattt      1500
     cagggctgtc aagggagagt accccagtat tattgagttg aaggacttta gagagctcca      1560
     cattcgtgaa ggggcgcaag aggacatctt ttggcggaaa ctagaggttg ttcagtgtat      1620
     tcaatacatt gacccaatca ccttctacct gctgcccaac ttcccaa                    1667
//