ID   AB796360; SV 1; linear; genomic RNA; STD; VRL; 1667 BP.
XX
AC   AB796360;
XX
DT   15-MAR-2013 (Rel. 116, Created)
DT   30-SEP-2013 (Rel. 118, Last updated, Version 2)
XX
DE   Gentian Kobu-sho-associated virus gene for hypothetical polyprotein,
DE   putative helicase domain, partial cds, isolate: Oh.
XX
KW   .
XX
OS   Gentian Kobu-sho-associated virus
OC   Viruses; Riboviria; dsRNA viruses.
XX
RN   [1]
RP   1-1667
RA   Atsumi G., Sekine K.T.;
RT   ;
RL   Submitted (07-MAR-2013) to the INSDC.
RL   Contact:Go Atsumi Iwate biotechnology research center; 22-174-4 Narita,
RL   Kitakami, Iwate 024-0003, Japan URL    :http://www.ibrc.or.jp
XX
RN   [2]
RX   DOI; 10.1099/vir.0.053637-0.
RX   PUBMED; 23907397.
RA   Atsumi G., Tomita R., Kobayashi K., Sekine K.;
RT   "Prevalence and genetic diversity of an unusual virus associated with
RT   Kobu-sho disease of gentian in Japan";
RL   J. Gen. Virol. 94(Pt 10):2360-2365(2013).
XX
DR   MD5; cb8d740a5cd36a9d7ea608ecd8b08755.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1667
FT                   /organism="Gentian Kobu-sho-associated virus"
FT                   /host="Gentiana triflora"
FT                   /cultivar="Iwate"
FT                   /isolate="Oh"
FT                   /mol_type="genomic RNA"
FT                   /country="Japan:Iwate, Hanamaki, Ohasama"
FT                   /isolation_source="Kobu-sho-affected stem"
FT                   /collection_date="2008"
FT                   /db_xref="taxon:1150353"
FT   CDS             <1..>1667
FT                   /codon_start=2
FT                   /transl_table=1
FT                   /product="hypothetical polyprotein"
FT                   /note="putative helicase domain"
FT                   /db_xref="InterPro:IPR001650"
FT                   /db_xref="InterPro:IPR014001"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:M4ZTR5"
FT                   /protein_id="BAM99901.1"
FT                   /translation="KTGESKMVDHFAFIDVSRDGQVIPVPFVDRTKGYSGLPILDEFGH
FT                   PVGIFGFLRTMRAKTENGVIDRPESARPSVQVGQFDITTKAVDVLQAVRGAGANGKWLR
FT                   LGAPTASGKSTKLVKEIGRIMYQKARRPIHIAVLEPRVFVVNNLWQGQSMMTNADAKDC
FT                   TFFNIVRKHGRLYENDKTQSHKDPSQAKVTITYMTYGSMVASLGKELRWDLVILDEFHS
FT                   RSDSDVLAVDAALQVLGHYNGVMAMTATFWAPDPTMNRFVDYSIGTAKKFPIERKVIKK
FT                   FDSVAEGEEGLYFKIRGPDGTFYALPRESCNAGGKTIVFLDSKNNCAKGMKELLATGPG
FT                   VNVMTLTSENRDVEIPDGQVVIFATNVAESGVTIVNCDNVISFGVQIEPQAGFDVNLGE
FT                   DGTFDSYHSLVQTKITTCAETQQMGRTGRTCPGTFWTTITTPLPEMTDFPRHAMSGAYL
FT                   TLMRNDEVMEMAEVRQRGGQWEDLLHTLRNLHPKFLPASLNFRAVKGEYPSITELKGFR
FT                   ELHIREGAQEDIFWRKLEVVQCIQYIDPITFYLLPNFP"
XX
SQ   Sequence 1667 BP; 493 A; 327 C; 442 G; 404 T; 1 other;
     aaagacaggc gagtctaaga tggttgacca ctttgccttt attgatgtct ctcgagatgg        60
     acaggttatt cctgtccctt tcgttgatag gaccaaaggt tatagtggac tcccaatctt       120
     agatgagttt ggacacccgg tgggaatctt cggattcctc aggacaatga gggccaagac       180
     ggaaaatggc gttatcgata gaccagagag cgctcgaccg agcgtgcaag ttgggcagtt       240
     tgatataaca acgaaagctg tcgacgtatt acaagctgtc agaggagctg gtgcgaatgg       300
     taaatggctc agactggggg ctccaacagc ttctgggaaa agcacaaagc tcgtgaagga       360
     gattggaaga ataatgtatc aaaaggctcg caggcctatt catattgccg tgcttgaacc       420
     tagggtgttt gttgtgaata acttatggca agggcaaagc atgatgacta atgctgatgc       480
     aaaagactgt acattcttta atatcgtgcg taaacacggg cgattgtatg aaaacgacaa       540
     aacacagtcg cacaaggacc caagccaggc caaggtcaca ataacataca tgacttatgg       600
     ttcaatggtg gccagtttgg gaaaagaact cagatgggat ttagttatcc ttgacgagtt       660
     ccatagtcgg agcgacagtg atgtgttggc agtcgatgct gcattgcaag trttgggaca       720
     ctacaacggg gtcatggcga tgaccgcaac tttctgggca ccagacccaa caatgaacag       780
     atttgttgat tactcgatcg gaacagcgaa gaaatttcct attgagcgga aagtgatcaa       840
     gaaatttgac tcagttgctg agggagaaga agggctgtac tttaagatca gaggccctga       900
     tggcacattc tatgccctac caagggagag ttgcaatgca ggagggaaaa ccattgtttt       960
     cttggatagt aaaaacaact gtgcgaaagg tatgaaagaa ctcttagcta cagggccagg      1020
     agtgaacgtt atgactctga caagtgaaaa cagagatgtt gagatccctg acggccaagt      1080
     ggtgattttc gctacgaatg tcgctgagag cggagttacg attgttaatt gtgataacgt      1140
     gatcagtttc ggagtgcaaa ttgagccaca ggcagggttc gatgtgaatc taggagaaga      1200
     tgggaccttc gattcctacc actcacttgt gcaaacaaaa ataacaactt gtgcagaaac      1260
     ccagcaaatg ggaagaactg gaagaacatg tccaggaaca ttttggacga caataacaac      1320
     acctcttcct gagatgactg atttcccccg gcatgctatg tccggggcgt acttaacatt      1380
     gatgcgaaat gatgaggtca tggaaatggc tgaagttaga caacgtggtg ggcagtggga      1440
     agatttatta cacacgttga ggaatttgca tccaaagttt ttaccagcca gcctcaattt      1500
     cagggctgtc aaaggggagt atcccagtat tactgagctg aagggcttta gagagctcca      1560
     cattcgtgaa ggggcgcaag aggacatctt ttggcggaaa ctagaggttg ttcagtgtat      1620
     ccaatacatt gacccaatca ccttctactt gctacctaat ttcccga                    1667
//