ID   AB796358; SV 1; linear; genomic RNA; STD; VRL; 1667 BP.
XX
AC   AB796358;
XX
DT   15-MAR-2013 (Rel. 116, Created)
DT   30-SEP-2013 (Rel. 118, Last updated, Version 2)
XX
DE   Gentian Kobu-sho-associated virus gene for hypothetical polyprotein,
DE   putative helicase domain, partial cds, isolate: NW46.
XX
KW   .
XX
OS   Gentian Kobu-sho-associated virus
OC   Viruses; Riboviria; dsRNA viruses.
XX
RN   [1]
RP   1-1667
RA   Atsumi G., Sekine K.T.;
RT   ;
RL   Submitted (07-MAR-2013) to the INSDC.
RL   Contact:Go Atsumi Iwate biotechnology research center; 22-174-4 Narita,
RL   Kitakami, Iwate 024-0003, Japan URL    :http://www.ibrc.or.jp
XX
RN   [2]
RX   DOI; 10.1099/vir.0.053637-0.
RX   PUBMED; 23907397.
RA   Atsumi G., Tomita R., Kobayashi K., Sekine K.;
RT   "Prevalence and genetic diversity of an unusual virus associated with
RT   Kobu-sho disease of gentian in Japan";
RL   J. Gen. Virol. 94(Pt 10):2360-2365(2013).
XX
DR   MD5; adf38c5f555f7dfd07c77c16504c26cd.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1667
FT                   /organism="Gentian Kobu-sho-associated virus"
FT                   /host="Gentiana sp."
FT                   /isolate="NW46"
FT                   /mol_type="genomic RNA"
FT                   /country="Japan:Iwate, Waga, Shinmachi"
FT                   /isolation_source="Kobu-sho-affected stem"
FT                   /collection_date="2010"
FT                   /db_xref="taxon:1150353"
FT   CDS             <1..>1667
FT                   /codon_start=2
FT                   /transl_table=1
FT                   /product="hypothetical polyprotein"
FT                   /note="putative helicase domain"
FT                   /db_xref="InterPro:IPR001650"
FT                   /db_xref="InterPro:IPR014001"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:M5AEB6"
FT                   /protein_id="BAM99899.1"
FT                   /translation="ETGESKMVDHFAFIDVSRDGQVIPVPFVDRTKGYSGLPILDEFGH
FT                   PVGIFGFLRTMRAKTENGVIDRPESARPSVQVGQFDITTKAVDVLQAVRGAGANGKWLR
FT                   LGAPTASGKSTRLVKEIGRIMYQKARRPIHIAVLEPRVFVVNNLWQGQSMMTNADAKDC
FT                   TFFNIVRKHGRLYENDKTQSHKDPSQAKVTITYMTYGSMVASLGKELRWDLVILDEFHS
FT                   RSDSDVLAVDAALQVLGHYNGVMAMTATFWAPDPNMNRFVDYSIGTAKKFPIERKVIKK
FT                   FDSVAEGEEGLYFKIRGPDGTFYALPRESCNAGGKTIVFLDSKNNCAKGMKELLATGPG
FT                   VNVMTLTSENRDVEIPDGQVVIFATNVAESGVTIVNCDNVISFGVQIEPQAGFDVNLGE
FT                   DGTFDSYHSLVQTKITTCAETQQMGRTGRTCPGTFWTTITTPLPEMADFPRHAMSGAYL
FT                   TLMRNDEVMEMAEVRQRGGQWEDLLHTLRNLHPKFLSASLNFRAVKGEYPSITELKDYR
FT                   ELHVREGVQEDIFRRKLEVVQCIQYIDPITFYLLPNFP"
XX
SQ   Sequence 1667 BP; 496 A; 321 C; 449 G; 401 T; 0 other;
     agagacaggc gagtccaaga tggtcgacca ttttgccttt attgatgttt cccgagatgg        60
     acaggtaatt cctgtccctt tcgttgacag aactaaaggt tacagtggac ttccaattct       120
     ggatgagttc ggacacccag taggaatctt tgggttcctc aggactatgc gagccaagac       180
     ggaaaatggc gtcattgata gaccagagag tgcccgaccg agtgtgcagg tgggacagtt       240
     tgatataaca acgaaagctg tcgatgtgtt gcaagcagtc agaggagctg gcgcaaatgg       300
     aaagtggctt agattagggg ccccaacagc atcaggaaag agtacaagac tcgtgaaaga       360
     gattggaaga ataatgtacc agaaggcccg caggcccatt cacattgctg tgcttgaacc       420
     cagggtgttt gttgtaaaca acttgtggca agggcaaagc atgatgacta atgctgatgc       480
     gaaggattgt acattcttta acattgtccg taaacacggg cgattgtatg aaaatgacaa       540
     gacgcaatct cacaaagacc cgagccaggc gaaggttaca ataacttata tgacttacgg       600
     gtcaatggta gccagtttgg gaaaagaact cagatgggat ttagttatct tggatgagtt       660
     ccacagccga agtgacagtg atgtgttggc agtagatgcc gcattgcaag ttttggggca       720
     ttataatgga gtcatggcga tgactgcaac gttttgggca ccagacccaa atatgaatcg       780
     gtttgtcgat tactccatcg gaacagcgaa gaaattcccc attgagagga aagtgatcaa       840
     gaagtttgat tcagttgctg aaggtgaaga aggcctatat ttcaagatca gagggcctga       900
     tggtacattc tatgccctcc caagggaaag ttgcaatgcg ggagggaaaa ctattgtttt       960
     cttagatagt aaaaataatt gtgcgaaagg catgaaagag cttctggcga cagggccggg      1020
     ggtgaatgtt atgactctca cgagtgagaa cagagacgtc gaaattccag acggacaagt      1080
     ggtgattttt gctacaaatg tcgctgagag cggagtcaca atagttaatt gtgacaacgt      1140
     gattagtttc ggagtgcaaa ttgagcccca agcagggttt gatgtaaacc taggagaaga      1200
     tgggactttc gattcctatc actcacttgt gcaaacaaaa ataacaactt gcgcagaaac      1260
     ccagcaaatg ggaagaactg gaagaacgtg tccaggaacg ttttggacga caataaccac      1320
     acctcttcca gagatggcag atttccctag gcatgcaatg tctggggcgt acttgacact      1380
     gatgaggaac gatgaagtca tggagatggc cgaggtcaga caacgtggtg gacaatggga      1440
     agacttgttg catacattga ggaatttaca tccaaagttt ttgtcggcca gtctcaactt      1500
     cagagctgtc aagggagagt accctagcat cactgagttg aaggactaca gagagctcca      1560
     tgttcgcgaa ggagtgcaag aggacatttt caggcggaaa ttagaggttg ttcagtgtat      1620
     ccagtacatt gatcctatca ccttctattt gctacccaac ttcccaa                    1667
//