ID   AB796350; SV 1; linear; genomic RNA; STD; VRL; 1667 BP.
XX
AC   AB796350;
XX
DT   15-MAR-2013 (Rel. 116, Created)
DT   30-SEP-2013 (Rel. 118, Last updated, Version 2)
XX
DE   Gentian Kobu-sho-associated virus gene for hypothetical polyprotein,
DE   putative helicase domain, partial cds, isolate: Id1.
XX
KW   .
XX
OS   Gentian Kobu-sho-associated virus
OC   Viruses; Riboviria; dsRNA viruses.
XX
RN   [1]
RP   1-1667
RA   Atsumi G., Sekine K.T.;
RT   ;
RL   Submitted (07-MAR-2013) to the INSDC.
RL   Contact:Go Atsumi Iwate biotechnology research center; 22-174-4 Narita,
RL   Kitakami, Iwate 024-0003, Japan URL    :http://www.ibrc.or.jp
XX
RN   [2]
RX   DOI; 10.1099/vir.0.053637-0.
RX   PUBMED; 23907397.
RA   Atsumi G., Tomita R., Kobayashi K., Sekine K.;
RT   "Prevalence and genetic diversity of an unusual virus associated with
RT   Kobu-sho disease of gentian in Japan";
RL   J. Gen. Virol. 94(Pt 10):2360-2365(2013).
XX
DR   MD5; f9981633a876813a0799a256c646ad12.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1667
FT                   /organism="Gentian Kobu-sho-associated virus"
FT                   /host="Gentiana sp."
FT                   /isolate="Id1"
FT                   /mol_type="genomic RNA"
FT                   /country="Japan:Iwate, Hanamaki, Ishidoriya"
FT                   /isolation_source="Kobu-sho-affected stem"
FT                   /collection_date="2010"
FT                   /db_xref="taxon:1150353"
FT   CDS             <1..>1667
FT                   /codon_start=2
FT                   /transl_table=1
FT                   /product="hypothetical polyprotein"
FT                   /note="putative helicase domain"
FT                   /db_xref="InterPro:IPR001650"
FT                   /db_xref="InterPro:IPR014001"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:M4ZTQ7"
FT                   /protein_id="BAM99891.1"
FT                   /translation="KTGESKMVDHFAFIDVSRDGQVIPVPFVDRTKGYSGLPILDEFGH
FT                   PVGIFGFLRTMRAKTENGVIDRPESARPSVQVGQFDITTKAVDVLQAVRGAGANGKWLR
FT                   LGAPTASGKSTRLVKEIGRIMYQKARRPIHIAVLEPRVFVVNNLWQGQSMMTNADAKDC
FT                   TFFNIVRKHGRLYENDKTQSHKDPSRAKVTITYMTYGSMVASLGKELRWDLVILDEFHS
FT                   RSDSDVLAVDAALQVLGHYNGVMAMTATFWAPDPTMNRFVDYSIGTAKKFPIERKVIKK
FT                   FDSVTEGEEGLYFKIRGPDGTFYALPREGCNAGGKTIVFLDSKNNCAKGMKELLATGPG
FT                   VNVMTLTSENRDVEIPDGQVVIFATNVAESGVTIVNCDNVISFGVQIEPQAGFDVNLGE
FT                   DGTFDSYHSLVQTKITTCAETQQMGRTGRTCPGTFWTTITTPLPEMTDFPRHAMSGAYL
FT                   TLMRNDEVMEMAEVRQRGGQWEDLLHTLRNLHPKFLPASLNFRAVKGEYPSITELKDFR
FT                   ELHIREGAQEDIFWRKLEVVQCIQYIDPITFYLLPNFP"
XX
SQ   Sequence 1667 BP; 501 A; 338 C; 438 G; 390 T; 0 other;
     gaagacaggc gagtccaaga tggtcgacca ctttgccttt attgatgtct cccgagatgg        60
     gcaggttatt cctgttcctt ttgttgacag aactaaaggc tatagcgggc tcccaatctt       120
     ggatgagttt ggacacccag taggaatttt tggattcctt aggactatga gagccaaaac       180
     ggaaaatggc gtcattgata gaccagagag cgctcgtcca agcgtgcaag tgggacaatt       240
     tgacataaca acgaaagctg tcgatgtgtt gcaagcagtc agaggagctg gcgcaaatgg       300
     aaagtggctc agactcgggg ccccaacagc ctctggaaag agtacaagac ttgtgaagga       360
     aattggaaga ataatgtacc aaaaggctcg caggcccatt cacatcgccg tgcttgagcc       420
     tagggtattc gttgtgaaca acttgtggca agggcaaagc atgatgacca atgctgatgc       480
     gaaagattgc acattcttta atatcgtccg caaacacggg cgattgtatg aaaatgacaa       540
     aacgcaatcg cataaggatc caagtcgagc gaaagtcaca ataacctaca tgacctatgg       600
     atcaatggtg gccagcctcg ggaaagagct cagatgggat ttagttatct tggatgagtt       660
     ccacagtcgg agtgatagtg atgtgttggc agtcgatgcc gcactgcaag tgttgggaca       720
     ttacaacggt gtcatggcaa tgaccgcaac cttctgggca ccagacccaa cgatgaatag       780
     atttgttgat tactcaattg gaacagcgaa gaagttccca atcgagagaa aggtgatcaa       840
     gaaattcgat tccgtcactg aaggtgaaga agggctttat ttcaagatca gaggccctga       900
     cggtacattc tacgccctgc caagggaagg ttgcaatgca ggagggaaga ctatcgtttt       960
     cctagatagt aaaaacaact gtgcgaaagg aatgaaggaa ctcttggcga caggaccggg      1020
     agtgaatgtg atgacactta caagtgagaa cagagacgtc gaaattccag acggacaagt      1080
     ggtgatcttt gctacgaatg tcgctgagag cggagttacg attgttaatt gtgataacgt      1140
     gatcagtttt ggagtgcaaa ttgagccaca ggcagggttc gatgtaaatc taggagaaga      1200
     tgggaccttc gattcttacc actcacttgt gcaaacaaaa ataacaactt gtgcagaaac      1260
     ccagcaaatg ggaagaactg gaagaacatg tccaggaaca ttttggacga caataacaac      1320
     acctcttcct gagatgactg atttcccccg gcatgctatg tccggggcgt acttaacatt      1380
     gatgcgaaat gatgaggtca tggaaatggc tgaagttaga caacgcggtg gacaatggga      1440
     agatctatta cacacgttga ggaacttaca tccaaagttt ttgccagcta gtctcaattt      1500
     cagggctgtc aaaggggagt atcccagtat tactgagttg aaagacttta gagagctcca      1560
     cattcgtgaa ggggcgcaag aggacatctt ttggcggaaa ctagaggttg ttcagtgtat      1620
     tcaatacatt gacccaatca ccttctacct gctgcctaac ttcccaa                    1667
//