ID   AB796349; SV 1; linear; genomic RNA; STD; VRL; 1667 BP.
XX
AC   AB796349;
XX
DT   15-MAR-2013 (Rel. 116, Created)
DT   30-SEP-2013 (Rel. 118, Last updated, Version 2)
XX
DE   Gentian Kobu-sho-associated virus gene for hypothetical polyprotein,
DE   putative helicase domain, partial cds, isolate: Fs1.
XX
KW   .
XX
OS   Gentian Kobu-sho-associated virus
OC   Viruses; Riboviria; dsRNA viruses.
XX
RN   [1]
RP   1-1667
RA   Atsumi G., Sekine K.T.;
RT   ;
RL   Submitted (07-MAR-2013) to the INSDC.
RL   Contact:Go Atsumi Iwate biotechnology research center; 22-174-4 Narita,
RL   Kitakami, Iwate 024-0003, Japan URL    :http://www.ibrc.or.jp
XX
RN   [2]
RX   DOI; 10.1099/vir.0.053637-0.
RX   PUBMED; 23907397.
RA   Atsumi G., Tomita R., Kobayashi K., Sekine K.;
RT   "Prevalence and genetic diversity of an unusual virus associated with
RT   Kobu-sho disease of gentian in Japan";
RL   J. Gen. Virol. 94(Pt 10):2360-2365(2013).
XX
DR   MD5; 414cb51da373dbc39e1b66c3723bf15e.
XX
FH   Key             Location/Qualifiers
FH
FT   source          1..1667
FT                   /organism="Gentian Kobu-sho-associated virus"
FT                   /host="Gentiana sp."
FT                   /isolate="Fs1"
FT                   /mol_type="genomic RNA"
FT                   /country="Japan:Fukushima, Ishikawa, Hirata"
FT                   /isolation_source="Kobu-sho-affected stem"
FT                   /collection_date="2010"
FT                   /db_xref="taxon:1150353"
FT   CDS             <1..>1667
FT                   /codon_start=2
FT                   /transl_table=1
FT                   /product="hypothetical polyprotein"
FT                   /note="putative helicase domain"
FT                   /db_xref="InterPro:IPR001650"
FT                   /db_xref="InterPro:IPR014001"
FT                   /db_xref="InterPro:IPR027417"
FT                   /db_xref="UniProtKB/TrEMBL:M4ZUH3"
FT                   /protein_id="BAM99890.1"
FT                   /translation="KTGESKMVDHFAFIDVSRDGQVIPVPFVDRTKGYSGLPILDEFGH
FT                   PVGIFGFLRTMRAKTENGVIDRPESARPSVQVGQFDITTKAVDVLQAVRGAGANGKWLR
FT                   LGAPTASGKSTRLVKEIGRIMYQRARRPIHIAVLEPRVFVVNNLWQGQSMMTNADAKDC
FT                   TFFNIVRKHGRLYENDKTQSHKDPSQAKVTITYMTYGSMVASLGKELRWDLVILDEFHS
FT                   RSDSDVLAVDAALQVLGHYNGVMAMTATFWAPDPTMNRFVDYSIGTAKKFPIERKVIKK
FT                   FDSVTEGEEGLYFKIRGPDGTFYALPRESCNAGGKTIVFLDSKNNCAKGMKELLATGPG
FT                   VNVMTLTSENRDVEIPDGQVVIFATNVAESGVTIVNCDNVISFGVQIEPQAGFDVNLGE
FT                   DGTFDSYHSLVQTKITTCAETQQMGRTGRTCPGTFWTTITTPLPEMTDFPRHAMSGAYL
FT                   TLMRNDEVMEMAEVRQRGGQWEDLLHTLRNLHPKFLPASLNFRAVKGEYPSITELKDFR
FT                   ELHIREGAQEDIFWRKLEVVQCIQYIDPITFYLLPNFP"
XX
SQ   Sequence 1667 BP; 508 A; 335 C; 437 G; 387 T; 0 other;
     gaagacaggc gagtccaaga tggttgatca cttcgccttt attgatgtct cccgagatgg        60
     acaggttatt cctgttcctt ttgttgacag aactaaaggt tatagtggac ttccaatctt       120
     ggatgagttt ggacacccgg tagggatttt tggattcctt aggacaatga gagctaagac       180
     agaaaatggt gtcattgata gaccagagag tgctcgacca agcgtgcaag tgggacagtt       240
     tgatataaca acgaaagctg tcgatgtgtt acaagcagtc agaggagctg gcgcaaatgg       300
     gaagtggctc agacttgggg ccccaacagc ttccggaaag agtacaagac ttgtgaagga       360
     aattggaaga ataatgtacc aaagggctcg caggcccatt cacatcgccg tgcttgagcc       420
     tagggtattc gttgtgaaca acttgtggca agggcaaagc atgatgacca atgctgatgc       480
     gaaagattgc acattcttta atatcgtccg caaacacggg cgattgtatg aaaatgacaa       540
     aacgcaatcg cataaggatc caagtcaagc gaaagtcaca ataacctaca tgacctatgg       600
     atcaatggtg gccagcctcg ggaaagagct cagatgggat ttagttatct tggacgagtt       660
     tcacagtcgg agtgacagtg acgtgttggc agtcgatgcc gcactgcaag tattgggaca       720
     ttataatgga gtcatggcga tgaccgcaac tttctgggca ccagatccaa cgatgaacag       780
     gtttgttgat tactctatcg ggacggcgaa gaaattccca atcgagagaa aggtgatcaa       840
     gaaattcgat tccgtcactg aaggtgaaga agggctgtat ttcaagatca gaggccctga       900
     cggtacattc tacgctctac caagggagag ttgcaacgca ggagggaaaa ctatcgtttt       960
     cctagatagt aaaaacaact gcgcgaaagg aatgaaggaa ctcttggcaa caggaccggg      1020
     agtgaatgta atgaccctta caagcgaaaa cagggatgtc gaaattccag acggacaagt      1080
     ggtgatattc gctacaaatg ttgctgagag cggagtcaca attgttaatt gcgacaacgt      1140
     aataagcttc ggagtgcaaa tcgagccaca agctgggttt gatgtgaacc taggagaaga      1200
     tggaactttt gattcctatc attcacttgt gcaaacaaaa ataacaactt gtgcggaaac      1260
     ccagcaaatg ggaagaactg gaagaacatg tccaggaaca ttttggacaa caataactac      1320
     gcctcttcca gagatgactg atttccctag acacgcaatg tctggggcgt acttaacttt      1380
     gatgagaaat gacgaagtca tggagatggc tgaggtcaga caacgtggcg gacagtggga      1440
     agacttgcta cacacgttga ggaatttaca tccaaaattt ttaccagcca gcctcaattt      1500
     cagggccgtc aagggagagt accccagtat tactgagttg aaggacttta gggagctcca      1560
     catccgtgaa ggggcgcagg aagatatatt ctggcggaaa ctagaggttg ttcagtgtat      1620
     tcaatacatt gacccaatca ccttctacct gctgcctaac ttcccaa                    1667
//